BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	979,388	T→C	R1280R (CGT→CGC)	mukB →	MukB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	979,388	0	T	C	100.0%	685.0 / NA	212	R1280R (CGT→CGC)	mukB	MukB
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (108/104); total (108/104)

Only 100 of 227 total aligned reads displayed.

CGAGCAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGTGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTTCTCGGA  >  NC_000913/979298‑979477

cgAGCAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGa                                                                                         >  1:2089900/1‑93 (MQ=255)

  aGCAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGaaa                                                                                       <  1:2686/93‑1 (MQ=255)

  aGCAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGaaa                                                                                       <  1:1511778/93‑1 (MQ=255)

   gCAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAac                                                                                      >  2:2113579/1‑93 (MQ=255)

   gCAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAac                                                                                      <  2:4506609/93‑1 (MQ=255)

    cAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAacg                                                                                     <  1:5057625/93‑1 (MQ=255)

    cAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAacg                                                                                     <  1:5568157/93‑1 (MQ=255)

     aGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAacgc                                                                                    >  2:798551/1‑93 (MQ=255)

      gAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAacgca                                                                                   >  2:3027949/1‑93 (MQ=255)

      gAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAacgca                                                                                   <  2:1711456/93‑1 (MQ=255)

       aaCCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAacgcac                                                                                  <  2:4388931/93‑1 (MQ=255)

        aCCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAacgcacg                                                                                 <  2:3885773/93‑1 (MQ=255)

        aCCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAacgcacg                                                                                 >  2:5922069/1‑93 (MQ=255)

          cgtatccgtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGcc                                                                               >  1:2357918/1‑93 (MQ=255)

           gtatccgtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCa                                                                              <  2:4035900/93‑1 (MQ=255)

            tatccgtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACTTGCGCGAAACGCACGCCAt                                                                             <  2:6154936/93‑1 (MQ=255)

            tatccgtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCAt                                                                             >  1:4585844/1‑93 (MQ=255)

            tatccgtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCAt                                                                             >  1:3500006/1‑93 (MQ=255)

             atccgtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATg                                                                            <  2:582766/93‑1 (MQ=255)

             atccgtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATg                                                                            >  2:2262227/1‑93 (MQ=255)

                  tatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACt                                                                       >  1:1738264/1‑93 (MQ=255)

                   atGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGACACGCACGCCATGCTACTg                                                                      >  1:894677/1‑93 (MQ=255)

                   atGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTg                                                                      >  2:3406816/1‑93 (MQ=255)

                       tCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGAtg                                                                  >  1:5323604/1‑93 (MQ=255)

                        cAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGAtgt                                                                 <  1:4228092/93‑1 (MQ=255)

                         aaCCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGAtgtg                                                                >  2:2964159/1‑93 (MQ=255)

                          aCCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGc                                                               >  1:1641928/1‑93 (MQ=255)

                          aCCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGc                                                               <  2:3438364/93‑1 (MQ=255)

                           ccAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGct                                                              >  2:5966962/1‑93 (MQ=255)

                           ccAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGct                                                              >  2:3591466/1‑93 (MQ=255)

                           ccAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGct                                                              >  2:5568366/1‑93 (MQ=255)

                            cAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGctc                                                             <  2:5888384/93‑1 (MQ=255)

                             aGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGctct                                                            >  1:3194363/1‑93 (MQ=255)

                             aGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGctct                                                            >  2:2137131/1‑93 (MQ=255)

                             aGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGctct                                                            >  1:989814/1‑93 (MQ=255)

                              ggggTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGctctc                                                           <  1:4829700/93‑1 (MQ=255)

                              ggggTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGctctc                                                           >  1:907489/1‑93 (MQ=255)

                               gggTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGctctct                                                          >  1:381577/1‑93 (MQ=255)

                               gggTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGctctct                                                          <  2:1691673/93‑1 (MQ=255)

                                 gTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGa                                                        >  2:3749682/1‑93 (MQ=255)

                                 gTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGa                                                        <  2:765490/93‑1 (MQ=255)

                                  ttGCAGAACGTATCGTTTGGTCAGGTGAGCAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGaa                                                       <  1:6138685/93‑1 (MQ=255)

                                  ttGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGaa                                                       <  1:324761/93‑1 (MQ=255)

                                   tGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAAc                                                      <  2:3558580/93‑1 (MQ=255)

                                     cAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAg                                                    <  1:2021322/93‑1 (MQ=255)

                                      aGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGc                                                   >  2:3169605/1‑93 (MQ=255)

                                      aGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGc                                                   <  2:5221511/93‑1 (MQ=255)

                                       gAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCa                                                  <  1:5792760/93‑1 (MQ=255)

                                       gAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCa                                                  <  1:5271974/93‑1 (MQ=255)

                                       gAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCa                                                  >  1:2171032/1‑93 (MQ=255)

                                           gTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGag                                              >  1:1025723/1‑93 (MQ=255)

                                           gTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGag                                              >  1:6187384/1‑93 (MQ=255)

                                           gTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGag                                              >  1:3596563/1‑93 (MQ=255)

                                           gTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGAGCTCTCTGAACAGCACGag                                              >  2:4781246/1‑93 (MQ=255)

                                            tATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGagc                                             >  2:3272577/1‑93 (MQ=255)

                                            tATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGagc                                             >  2:4527144/1‑93 (MQ=255)

                                            tATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGagc                                             >  1:4557799/1‑93 (MQ=255)

                                            tATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGagc                                             <  1:2614575/93‑1 (MQ=255)

                                             aTCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGagca                                            <  2:1597201/93‑1 (MQ=255)

                                             aTCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGagca                                            <  2:282277/93‑1 (MQ=255)

                                              tCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGagcag                                           <  1:5719203/93‑1 (MQ=255)

                                               cGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATACTACTGGATGTGCTCTCTGAACAGCACGagcagc                                          >  2:2809688/1‑93 (MQ=255)

                                                 tttGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCAt                                        >  1:733515/1‑93 (MQ=255)

                                                  ttGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATc                                       <  2:2912247/93‑1 (MQ=255)

                                                  ttGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATc                                       <  2:2431515/93‑1 (MQ=255)

                                                   tGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCa                                      <  1:439369/93‑1 (MQ=255)

                                                    ggTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAg                                     >  2:5325685/1‑93 (MQ=255)

                                                     gTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAgg                                    >  2:4911060/1‑93 (MQ=255)

                                                     gTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAgg                                    >  1:2266286/1‑93 (MQ=255)

                                                        aGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATc                                 >  2:2213359/1‑93 (MQ=255)

                                                        aGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATc                                 <  1:2194598/93‑1 (MQ=255)

                                                         ggTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCt                                >  1:1167693/1‑93 (MQ=255)

                                                            gAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGtt                             >  2:5998288/1‑93 (MQ=255)

                                                              aCAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATGTGTTTa                           >  1:2243688/1‑93 (MQ=255)

                                                                aGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAAc                         >  2:422999/1‑93 (MQ=255)

                                                                   gtgcgtCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAga                      >  1:1351828/1‑92 (MQ=255)

                                                                    tgcgtCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCa                     >  2:206533/1‑93 (MQ=255)

                                                                      cgtCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAAc                   <  2:1155897/93‑1 (MQ=255)

                                                                      cgtCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAAc                   <  2:5544058/93‑1 (MQ=255)

                                                                       gtCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAAcc                  >  2:3124467/1‑93 (MQ=255)

                                                                        tctcAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCg                 <  1:5198325/93‑1 (MQ=255)

                                                                        tctcAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGAAGCATCAGGATCTGTTTAACAGCAACCg                 >  1:1664093/1‑93 (MQ=255)

                                                                         ctcAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGt                >  1:290067/1‑93 (MQ=255)

                                                                         ctcAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGt                <  1:698528/93‑1 (MQ=255)

                                                                         ctcAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGt                >  1:4721420/1‑93 (MQ=255)

                                                                          tcAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGtt               <  2:1904737/93‑1 (MQ=255)

                                                                          tcAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGtt               >  1:2829123/1‑93 (MQ=255)

                                                                          tcAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGtt               >  1:1004275/1‑93 (MQ=255)

                                                                           cAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGttt              <  1:6056886/93‑1 (MQ=255)

                                                                            aacgtgaacgtgCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTg             >  1:4280734/1‑93 (MQ=255)

                                                                            aacgtgaacgtgCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTg             <  1:4125587/93‑1 (MQ=255)

                                                                                  aacgtgCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTtc       <  2:1353098/93‑1 (MQ=255)

                                                                                   acgtgCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTtct      >  2:3642159/1‑93 (MQ=255)

                                                                                   acgtgCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTtct      >  1:3302560/1‑93 (MQ=255)

                                                                                   acgtgCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGGTTAACAGCAACCGTTTGACCTtct      >  1:3087139/1‑93 (MQ=255)

                                                                                    cgtgcgcgAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTtctc     <  1:6240876/93‑1 (MQ=255)

                                                                                     gtgcgcgAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTTCTCg    <  2:4635768/93‑1 (MQ=255)

                                                                                     gtgcgcgAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTTCTCg    >  2:4609947/1‑93 (MQ=255)

                                                                                       gcgcgAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTTCTCGGa  >  2:4309544/1‑93 (MQ=255)

                                                                                       gcgcgAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTTCTCGGa  <  2:926153/93‑1 (MQ=255)

CGAGCAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGTGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTTCTCGGA  >  NC_000913/979298‑979477

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`