Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 987,323 C→T A296T (GCC→ACC)  asnS ← asparagine tRNA synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913987,3230CT99.1% 772.8 / NA 223A296T (GCC→ACC) asnSasparagine tRNA synthetase
Reads supporting (aligned to +/- strand):  ref base C (2/0);  new base T (105/116);  total (107/116)
Fisher's exact test for biased strand distribution p-value = 2.29e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 226 total aligned reads displayed.

TCCTGCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGCATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTCAG  >  NC_000913/987233‑987412
                                                                                          |                                                                                         
     ccGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTa                                                                                    <  2:4696873/93‑1 (MQ=255)
      cGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTAt                                                                                   >  2:5514793/1‑93 (MQ=255)
      cGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTAt                                                                                   <  1:1880595/93‑1 (MQ=255)
       gCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATc                                                                                  >  1:5979489/1‑93 (MQ=255)
       gCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATc                                                                                  >  2:2291846/1‑93 (MQ=255)
        cAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTTAATGAAGCGTTCCAGACGTGAAACGCTATCTTTATCt                                                                                 <  1:1399963/93‑1 (MQ=255)
         aGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTa                                                                                >  2:82962/1‑93 (MQ=255)
         aGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTa                                                                                <  1:488843/93‑1 (MQ=255)
          gTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTAc                                                                               <  1:106296/93‑1 (MQ=255)
          gTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTAc                                                                               >  1:794855/1‑93 (MQ=255)
           ttttCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTAcg                                                                              >  2:3169164/1‑93 (MQ=255)
           ttttCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTAcg                                                                              >  2:3551033/1‑93 (MQ=255)
           ttttCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTAcg                                                                              >  1:4895111/1‑93 (MQ=255)
            tttCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTAcgc                                                                             <  1:1973363/93‑1 (MQ=255)
               cGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGtt                                                                          <  2:4163292/93‑1 (MQ=255)
                gagaATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTc                                                                         >  1:6255022/1‑93 (MQ=255)
                gagaATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTc                                                                         <  2:3486273/93‑1 (MQ=255)
                 agaATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCa                                                                        >  2:2127769/1‑93 (MQ=255)
                   aaTGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGc                                                                      <  2:2468084/93‑1 (MQ=255)
                     tGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCga                                                                    >  1:3934161/1‑93 (MQ=255)
                      ggTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCgaa                                                                   <  1:2242591/93‑1 (MQ=255)
                      ggTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCgaa                                                                   >  1:277539/1‑93 (MQ=255)
                        tCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCgaaga                                                                 <  1:4789013/93‑1 (MQ=255)
                        tCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCgaaga                                                                 >  2:1351658/1‑93 (MQ=255)
                        tCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCgaaga                                                                 <  2:4745170/93‑1 (MQ=255)
                         cACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGCATCTTTATCTACGCGTTCAGCgaagaa                                                                >  1:234266/1‑93 (MQ=255)
                          aCTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAAt                                                               <  1:4569364/93‑1 (MQ=255)
                          aCTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAAt                                                               >  1:4145135/1‑93 (MQ=255)
                            tGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGCATCTTTATCTACGCGTTCAGCGAAGAAttt                                                             >  1:3884241/1‑93 (MQ=255)
                             gCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTc                                                            >  2:3028856/1‑93 (MQ=255)
                             gCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTc                                                            <  2:572828/93‑1 (MQ=255)
                              cGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCa                                                           <  1:1547998/93‑1 (MQ=255)
                              cGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCa                                                           >  1:5331520/1‑93 (MQ=255)
                               gTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCAt                                                          <  2:3962772/93‑1 (MQ=255)
                                tCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATg                                                         >  1:2537733/1‑93 (MQ=255)
                                 cGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATgt                                                        <  1:6043091/93‑1 (MQ=255)
                                  ggTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATgtc                                                       <  2:1523960/93‑1 (MQ=255)
                                     ataATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATgtcgtc                                                    <  1:5163657/93‑1 (MQ=255)
                                      taATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCa                                                   >  2:1602843/1‑93 (MQ=255)
                                        aTCCACCTGCGCAAAAGCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAgc                                                 <  1:3473531/93‑1 (MQ=255)
                                         tCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAgcg                                                >  1:1937000/1‑93 (MQ=255)
                                          ccACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAgcgc                                               <  2:3105629/93‑1 (MQ=255)
                                           cACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGcgcg                                              <  2:6274347/93‑1 (MQ=255)
                                           cACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGcgcg                                              <  1:1113164/93‑1 (MQ=255)
                                           cACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGcgcg                                              >  1:1745820/1‑93 (MQ=255)
                                            aCCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGt                                             >  1:1289472/1‑93 (MQ=255)
                                            aCCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGt                                             <  1:3147202/93‑1 (MQ=255)
                                            aCCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGt                                             <  2:424449/93‑1 (MQ=255)
                                            aCCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGATATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGt                                             >  1:960675/1‑93 (MQ=255)
                                             ccTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGtt                                            >  2:671071/1‑93 (MQ=255)
                                              cTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGttc                                           >  1:2950427/1‑93 (MQ=255)
                                               tGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGttct                                          >  2:4285937/1‑93 (MQ=255)
                                               tGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGttct                                          >  2:5544979/1‑93 (MQ=255)
                                               tGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGttct                                          <  2:1774187/93‑1 (MQ=255)
                                                gcgcAAAATCGGCTTCAATGAAGCGTGCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGttctt                                         <  1:4416668/93‑1 (MQ=255)
                                                 cgcAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGttcttc                                        <  1:6285246/93‑1 (MQ=255)
                                                  gcAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCg                                       >  2:3286066/1‑93 (MQ=255)
                                                    aaaaTCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCgag                                     >  2:4412003/1‑93 (MQ=255)
                                                     aaaTCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCgaga                                    >  1:5530235/1‑93 (MQ=255)
                                                     aaaTCGGCTTCAATGAAGCGTTCCAGACCTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCgaga                                    <  2:1442933/93‑1 (MQ=255)
                                                      aaNCGGNTTCAATGAAGCGTTCNAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGaa                                   <  1:4290843/93‑1 (MQ=255)
                                                        tCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAAcc                                 <  1:3078009/93‑1 (MQ=255)
                                                          ggCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGc                               <  1:2743773/93‑1 (MQ=255)
                                                          ggCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGc                               <  2:4475665/93‑1 (MQ=255)
                                                           gCTTCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCt                              <  2:1924229/93‑1 (MQ=255)
                                                              tCAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTg                           >  1:3643243/1‑93 (MQ=255)
                                                               cAATGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGa                          >  2:436010/1‑93 (MQ=255)
                                                                aaTGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGaa                         <  2:5440982/93‑1 (MQ=255)
                                                                aaTGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGaa                         <  1:5082779/93‑1 (MQ=255)
                                                                aaTGAAACGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCAAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGaa                         <  1:1556473/93‑1 (MQ=255)
                                                                  tGAAGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGa                       <  1:3205205/93‑1 (MQ=255)
                                                                    aaGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGCTCTTCGAGAACCGCTTTGAAGACa                     <  2:6072823/93‑1 (MQ=255)
                                                                     aGCGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACat                    <  2:6116718/93‑1 (MQ=255)
                                                                       cGTTCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACatat                  <  1:1123740/93‑1 (MQ=255)
                                                                        gTTACAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATAtt                 <  1:1810974/93‑1 (MQ=255)
                                                                          tCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTc               <  2:3751689/93‑1 (MQ=255)
                                                                          tCCAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTc               <  1:3419133/93‑1 (MQ=255)
                                                                           ccAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCa              <  1:1519780/93‑1 (MQ=255)
                                                                           ccAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCa              <  1:4062159/93‑1 (MQ=255)
                                                                            cAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAg             >  1:5665187/1‑93 (MQ=255)
                                                                            cAGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAg             <  2:1649953/93‑1 (MQ=255)
                                                                             aGACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGc            >  2:5327251/1‑93 (MQ=255)
                                                                              gACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCa           >  2:3135377/1‑93 (MQ=255)
                                                                              gACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCa           <  2:2006385/93‑1 (MQ=255)
                                                                              gACGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCa           >  2:4929083/1‑93 (MQ=255)
                                                                               aCGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCAt          >  1:2858622/1‑93 (MQ=255)
                                                                                cGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATg         <  1:5801278/93‑1 (MQ=255)
                                                                                cGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATg         >  2:654675/1‑93 (MQ=255)
                                                                                cGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATg         <  2:224861/93‑1 (MQ=255)
                                                                                cGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATg         <  2:2661188/93‑1 (MQ=255)
                                                                                cGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATg         >  2:4014239/1‑93 (MQ=255)
                                                                                cGTGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATg         <  2:3793075/93‑1 (MQ=255)
                                                                                  tGAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGc       >  2:2071164/1‑93 (MQ=255)
                                                                                   gAAACGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCt      <  2:5252134/93‑1 (MQ=255)
                                                                                    aaaCGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCtt     <  1:4466332/93‑1 (MQ=255)
                                                                                     aaCGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTc    <  2:2443153/93‑1 (MQ=255)
                                                                                     aaCGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTc    >  1:1901922/1‑93 (MQ=255)
                                                                                     aaCGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTc    <  2:1183881/93‑1 (MQ=255)
                                                                                      aCGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTCa   >  2:3927021/1‑93 (MQ=255)
                                                                                       cGGTATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTCAg  >  1:4834312/1‑93 (MQ=255)
                                                                                          |                                                                                         
TCCTGCCGCAGTTTTCGAGAATGGTCACTGCGTCGGTATAATCCACCTGCGCAAAATCGGCTTCAATGAAGCGTTCCAGACGTGAAACGGCATCTTTATCTACGCGTTCAGCGAAGAATTTCATGTCGTCAGCGCGTTCTTCGAGAACCGCTTTGAAGACATATTTCAGCATGGCTTCAG  >  NC_000913/987233‑987412

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: