BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,005,090	C→T	intergenic (+89/‑85)	pyrD → / → ycbW	dihydro‑orotate dehydrogenase/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,005,090	0	C	T	100.0%	708.9 / NA	188	intergenic (+89/‑85)	pyrD/ycbW	dihydro‑orotate dehydrogenase/hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (107/81); total (107/81)

Only 100 of 190 total aligned reads displayed.

AATTATTTCTTCGAATTCCTCTTTATAAGATAATCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGACATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTATAGGGTAGGGGAGAGGCAGATGC  >  NC_000913/1005000‑1005178

aaTTATTTCTTCGAATTCCTCTTTATAAGATAATCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGatat                                                                                        >  1:1037946/1‑93 (MQ=255)

aaTTATTTCTTCGAATTCCTCTTTATAAGATAATCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGatat                                                                                        >  1:4721806/1‑93 (MQ=255)

 attattTCTTCGAATTCCTCTTTATAAGATAATCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATAtt                                                                                       >  2:2762786/1‑93 (MQ=255)

 attattTCTTCGAATTCCTCTTTATAAGATAATCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATAtt                                                                                       <  1:6232335/93‑1 (MQ=255)

 attattTCTTCGAATTCCTCTTTATAAGATAATCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATAtt                                                                                       <  1:5217717/93‑1 (MQ=255)

  ttattTCTTCGAATTCCTCTTTATAAGATAATCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATAttt                                                                                      >  2:3215926/1‑93 (MQ=255)

   tattTCTTCGAATTCCTCTTTATAAGATAATCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATAtttt                                                                                     <  2:286889/93‑1 (MQ=255)

    attTCTTCGAATTCCTCTTTATAAGATAATCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTg                                                                                    <  1:1738316/93‑1 (MQ=255)

    attTCTTCGAATTCCTCTTTATAAGATAATCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTg                                                                                    >  2:3843341/1‑93 (MQ=255)

         ttcGAATTCCTCTTTATAAGATAATCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACtt                                                                               <  2:5738115/93‑1 (MQ=255)

         ttcGAATTCCTCTTTATAAGATAATCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTAGTTAGATATTTTGTACtt                                                                               <  2:411834/93‑1 (MQ=255)

            gAATTCCTCTTTATAAGATAATCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTa                                                                            >  2:1250193/1‑93 (MQ=255)

            gAATTCCTCTTTATAAGATAATCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTa                                                                            <  2:2624429/93‑1 (MQ=255)

             aaTTCCTCTTTATAAGATAATCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTAt                                                                           >  1:4528906/1‑93 (MQ=255)

             aaTTCCTCTTTATAAGATAATCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTAt                                                                           >  1:1934718/1‑93 (MQ=255)

                  ctctTTATAAGATAATCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTAttgttg                                                                      >  1:364216/1‑93 (MQ=255)

                     tttATAAGATAATCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAgg                                                                   >  1:738703/1‑93 (MQ=255)

                     tttATAAGATAATCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAgg                                                                   >  2:3112458/1‑93 (MQ=255)

                     tttATAAGATAATCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAgg                                                                   >  2:3714090/1‑93 (MQ=255)

                       tataAGATAATCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGtt                                                                 >  1:1475236/1‑93 (MQ=255)

                       tataAGATAATCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGtt                                                                 >  2:174473/1‑93 (MQ=255)

                        ataAGATAATCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGtta                                                                >  2:1532198/1‑93 (MQ=255)

                           aGATAATCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGttatta                                                             <  2:556127/93‑1 (MQ=255)

                              tAATCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTaagc                                                          >  1:28801/1‑93 (MQ=255)

                              tAATCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTaagc                                                          <  1:3432971/93‑1 (MQ=255)

                               aaTCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTaagcg                                                         >  1:4858881/1‑93 (MQ=255)

                                aTCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTaagcga                                                        <  1:3800287/93‑1 (MQ=255)

                                aTCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTaagcga                                                        >  2:2296796/1‑93 (MQ=255)

                                 tCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTaagcgaa                                                       >  2:4156201/1‑93 (MQ=255)

                                  cAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTaagcgaag                                                      <  1:2720442/93‑1 (MQ=255)

                                   aGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTaagcgaagc                                                     >  1:2253080/1‑93 (MQ=255)

                                    gggCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTaagcgaagcg                                                    >  1:561112/1‑93 (MQ=255)

                                     ggCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAagcgaagcga                                                   >  2:5820938/1‑93 (MQ=255)

                                       cTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACa                                                 >  1:4761163/1‑93 (MQ=255)

                                        tttATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACaa                                                <  2:1280629/93‑1 (MQ=255)

                                          tATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATg                                              <  2:5987796/93‑1 (MQ=255)

                                          tATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATg                                              <  1:3076794/93‑1 (MQ=255)

                                          tATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATg                                              >  1:2045467/1‑93 (MQ=255)

                                          tATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATg                                              <  1:752707/93‑1 (MQ=255)

                                           aTTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATgg                                             <  2:3005901/93‑1 (MQ=255)

                                           aTTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATgg                                             >  1:2179441/1‑93 (MQ=255)

                                            ttttCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGa                                            >  1:4583689/1‑93 (MQ=255)

                                             tttCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGAt                                           <  2:2722868/93‑1 (MQ=255)

                                              ttCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGAtt                                          <  1:5266767/93‑1 (MQ=255)

                                               tCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATtg                                         <  1:3860715/93‑1 (MQ=255)

                                                cAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGTTATTTTGTAGTTTTTTTGTTGAGGTTATTAAGCGAAGCGCCAACAGATtgt                                        >  2:1103188/1‑93 (MQ=255)

                                                cAGCCCTGGTTGTCTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATtgt                                        <  1:3603373/93‑1 (MQ=255)

                                                  gCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTgtgt                                      <  2:241023/93‑1 (MQ=255)

                                                   cccTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGtt                                     <  1:5770472/93‑1 (MQ=255)

                                                    ccTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTtg                                    <  2:4447294/93‑1 (MQ=255)

                                                     cTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTtgc                                   <  1:1857350/93‑1 (MQ=255)

                                                     cTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTtgc                                   >  2:3149236/1‑93 (MQ=255)

                                                     cTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTtgc                                   >  2:3879571/1‑93 (MQ=255)

                                                     cTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTtgc                                   >  1:2288393/1‑93 (MQ=255)

                                                      tGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTtgct                                  <  1:5512338/93‑1 (MQ=255)

                                                       ggTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTtgctg                                 >  2:3808170/1‑93 (MQ=255)

                                                       ggTTGTTTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTtgctg                                 >  2:267946/1‑93 (MQ=255)

                                                        gttgttTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTtggtgc                                >  1:1626000/1‑93 (MQ=255)

                                                         ttgttTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCg                               >  2:3313979/1‑93 (MQ=255)

                                                          tgttTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCgg                              >  2:664071/1‑93 (MQ=255)

                                                          tgttTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCgg                              >  2:1882871/1‑93 (MQ=255)

                                                           gttTTATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGt                             >  1:4723954/1‑93 (MQ=255)

                                                             tttATATTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGttt                           <  2:6256152/93‑1 (MQ=255)

                                                                 tatTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTtata                       >  2:6087511/1‑93 (MQ=255)

                                                                 tatTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTtata                       >  2:781987/1‑93 (MQ=255)

                                                                 tatTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTtata                       >  1:2341054/1‑93 (MQ=255)

                                                                  atTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTTtag                      >  1:5334209/1‑93 (MQ=255)

                                                                  atTCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTAtag                      <  1:4312662/93‑1 (MQ=255)

                                                                    tCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTAtaggg                    <  2:2777873/93‑1 (MQ=255)

                                                                    tCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTAtaggg                    <  2:342661/93‑1 (MQ=255)

                                                                    tCATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTAtaggg                    <  2:606555/93‑1 (MQ=255)

                                                                     cATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTAtagggt                   >  1:1350502/1‑93 (MQ=255)

                                                                     cATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTAtagggt                   >  1:4429112/1‑93 (MQ=255)

                                                                     cATCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTAtagggt                   <  2:5338891/93‑1 (MQ=255)

                                                                      aTCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTAtagggta                  <  2:1593496/93‑1 (MQ=255)

                                                                       tCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTAtagggtag                 >  1:5873484/1‑93 (MQ=255)

                                                                       tCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTAtagggtag                 <  1:4751274/93‑1 (MQ=255)

                                                                       tCGCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTAtagggtag                 >  1:2425768/1‑93 (MQ=255)

                                                                         gCTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTAtagggtaggg               >  1:888054/1‑93 (MQ=255)

                                                                          cTGTTGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTATAGGGAAgggg              >  2:4747344/1‑93 (MQ=255)

                                                                             ttGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTATAGgggaggggagg           >  2:3374179/1‑92 (MQ=255)

                                                                              tGCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTATAGGGTAGGGGagag          >  2:4800977/1‑93 (MQ=255)

                                                                               gCTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTATAGGGTAGGGGAGAgg         >  2:686583/1‑93 (MQ=255)

                                                                                cTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTATAGGGTAGGGGAGAGGc        <  1:5176886/93‑1 (MQ=255)

                                                                                cTTATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTATAGGGTAGGGGAGAGGc        <  2:4627289/93‑1 (MQ=255)

                                                                                 ttATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTATAGGGTAGGGGAGAGGCa       <  2:5258473/93‑1 (MQ=255)

                                                                                  tATTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTATAGGGTAGGGGAGAGGCAg      >  1:1069216/1‑93 (MQ=255)

                                                                                   aTTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTATAGGGTAGGGGAGAGGCAGa     <  2:1074569/93‑1 (MQ=255)

                                                                                   aTTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTATAGGGTAGGGGAGAGGCAGa     <  2:1357408/93‑1 (MQ=255)

                                                                                   aTTTAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTATAGGGTAGGGGAGAGGCAGa     <  2:2032437/93‑1 (MQ=255)

                                                                                    tttAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTATAGGGTAGGGGAGAGGCAGAt    <  2:392968/93‑1 (MQ=255)

                                                                                    tttAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTATAGGGTAGGGGAGAGGCAGAt    <  1:3214660/93‑1 (MQ=255)

                                                                                    tttAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTATAGGGTAGGGGAGAGGCAGAt    >  1:5976752/1‑93 (MQ=255)

                                                                                     ttAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTATAGGGTAGGGGAGAGGCAGATg   <  2:3556592/93‑1 (MQ=255)

                                                                                     ttAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTATAGGGGAGGGGAGAGGCAGATg   >  2:2660263/1‑93 (MQ=255)

                                                                                      tAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTATAGGGTAGGGGAGAGGCAGATGc  <  2:4565034/93‑1 (MQ=255)

                                                                                      tAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTATAGGGTAGGGGAGAGGCAGATGc  <  1:4130699/93‑1 (MQ=255)

                                                                                      tAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTATAGGGTAGGGGAGAGGCAGATGc  <  1:3289369/93‑1 (MQ=255)

                                                                                      tAGATATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTATAGGGTAGGGGAGAGGCAGATGc  >  1:2619073/1‑93 (MQ=255)

                                                                                      tAGATATTTTGTACTTTTATTGTTGAGGGTATTAAGCGAAGCGACAATGGATTGTGCTGCTGCGGTTTTCTAGGGTAGGGGAGAGGCAGCTGc  >  2:6226601/1‑93 (MQ=255)

AATTATTTCTTCGAATTCCTCTTTATAAGATAATCAGGGCTTTATTTTCAGCCCTGGTTGTTTTATATTCATCGCTGTTGCTTATTTAGACATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTTATAGGGTAGGGGAGAGGCAGATGC  >  NC_000913/1005000‑1005178

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`