BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,136,396	A→G	G301G (GGA→GGG)	flgI →	FlgI

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,136,396	0	A	G	100.0%	757.7 / NA	232	G301G (GGA→GGG)	flgI	FlgI
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (107/125); total (107/125)

Only 100 of 234 total aligned reads displayed.

CGACAGCTGCGCGGTAGCGCAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGACAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCAGCGCCAGCCTCAATA  >  NC_000913/1136306‑1136484

 gACAGCTGCGCGGTAGCGCAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAg                                                                                       >  1:3536052/1‑93 (MQ=255)

  aCAGCTGCGCGGTAGCGCCGGGGAATCTCTCAGTAACAGTTAATCCTCAGGCCAATGTCAGCCAGCCCGATATACCGTTTGGTGGTGGGCAGa                                                                                      >  2:4221975/1‑93 (MQ=255)

  aCAGCTGCGCGGTAGCGCAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGa                                                                                      <  1:653299/93‑1 (MQ=255)

  aCAGCTGCGCGGTAGCGCAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGa                                                                                      >  2:2142333/1‑93 (MQ=255)

   cAGCTGCGCGGTAGCGCAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGAc                                                                                     <  1:3977995/93‑1 (MQ=255)

      cTGCGCGGTAGCGCAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACtgt                                                                                  <  2:2678753/93‑1 (MQ=255)

        gcgcGGTAGCGCAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTgg                                                                                <  1:1814226/93‑1 (MQ=255)

           cgGTAGCGCAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTa                                                                             <  2:2449085/93‑1 (MQ=255)

            ggTAGCGCAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTAc                                                                            <  1:1322159/93‑1 (MQ=255)

              tAGCGCAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTc                                                                          <  1:6041016/93‑1 (MQ=255)

               aGCGCAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTcc                                                                         >  2:2580283/1‑93 (MQ=255)

               aGCGCAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTcc                                                                         <  2:2907177/93‑1 (MQ=255)

                  gcAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCcaca                                                                      <  2:3228796/93‑1 (MQ=255)

                  gcAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCcaca                                                                      >  2:3451578/1‑93 (MQ=255)

                  gcAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCcaca                                                                      >  2:1989169/1‑93 (MQ=255)

                  gcAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCcaca                                                                      <  1:36507/93‑1 (MQ=255)

                    aGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACaac                                                                    >  1:1017066/1‑92 (MQ=255)

                    aGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACaaa                                                                    <  1:4079478/93‑1 (MQ=255)

                    aGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACaaa                                                                    <  2:78471/93‑1 (MQ=255)

                    aGGCGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACaaa                                                                    <  2:1093997/93‑1 (MQ=255)

                     ggggAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAAc                                                                   <  1:2837329/93‑1 (MQ=255)

                     ggggAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAAc                                                                   <  2:4488444/93‑1 (MQ=255)

                     ggggAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAAc                                                                   >  1:1279934/1‑93 (MQ=255)

                     ggggAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAAc                                                                   <  2:5898650/93‑1 (MQ=255)

                        gAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCa                                                                >  1:3058891/1‑93 (MQ=255)

                        gAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCa                                                                <  1:6174416/93‑1 (MQ=255)

                         aaTCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAg                                                               <  2:3894889/93‑1 (MQ=255)

                          aTCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGa                                                              >  1:811437/1‑93 (MQ=255)

                           tctctcAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGCGGTGGGCAGACTGTGGTTACTCCACAAACGCAGAt                                                             >  1:6023275/1‑93 (MQ=255)

                            ctctcAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATc                                                            >  1:940124/1‑93 (MQ=255)

                            ctctcAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATc                                                            <  2:3551351/93‑1 (MQ=255)

                              ctcAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGa                                                          >  2:6200444/1‑93 (MQ=255)

                              ctcAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGa                                                          <  1:5251817/93‑1 (MQ=255)

                               tcAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGAt                                                         >  2:5212054/1‑93 (MQ=255)

                                 aGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGAttt                                                       <  2:5556581/93‑1 (MQ=255)

                                   tAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTAc                                                     >  2:3188085/1‑93 (MQ=255)

                                   tAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTAc                                                     >  1:4300050/1‑93 (MQ=255)

                                   tAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTAc                                                     >  1:5609569/1‑93 (MQ=255)

                                   tAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTAc                                                     >  1:5479393/1‑93 (MQ=255)

                                      cAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGcc                                                  <  1:1773542/93‑1 (MQ=255)

                                       aGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCa                                                 <  1:5386781/93‑1 (MQ=255)

                                       aGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCa                                                 <  2:3771277/93‑1 (MQ=255)

                                        gTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCag                                                <  1:1608248/93‑1 (MQ=255)

                                        gTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCag                                                <  2:1338485/93‑1 (MQ=255)

                                          tAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCagag                                              <  1:4957515/93‑1 (MQ=255)

                                           aaTCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAgc                                             <  2:615200/93‑1 (MQ=255)

                                             tCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAgcgg                                           <  1:2477614/93‑1 (MQ=255)

                                             tCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAgcgg                                           <  2:2320596/93‑1 (MQ=255)

                                             tCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAgcgg                                           <  2:5785036/93‑1 (MQ=255)

                                               gTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAgcggcg                                         >  2:5600970/1‑93 (MQ=255)

                                                tCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGcggcgg                                        >  1:3963549/1‑93 (MQ=255)

                                                 cAGGCCAATGTCAGCCAGCCCGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGt                                       >  1:1087988/1‑93 (MQ=255)

                                                 cAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGt                                       >  1:3327415/1‑93 (MQ=255)

                                                  aGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGtt                                      <  1:4858062/93‑1 (MQ=255)

                                                   ggCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTc                                     >  1:4602007/1‑93 (MQ=255)

                                                     ccAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGc                                   >  2:5984616/1‑93 (MQ=255)

                                                     ccAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGc                                   >  1:3732118/1‑93 (MQ=255)

                                                     ccAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGc                                   >  1:5950623/1‑93 (MQ=255)

                                                     ccAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGc                                   <  2:1800579/93‑1 (MQ=255)

                                                     ccAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGc                                   >  2:5713469/1‑93 (MQ=255)

                                                      cAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCt                                  <  1:5632191/93‑1 (MQ=255)

                                                       aaTGTCAGCCAGCCAGCTACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTg                                 >  1:2812911/1‑93 (MQ=255)

                                                        aTGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTtgctgc                                >  2:3065100/1‑93 (MQ=255)

                                                         tGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCa                               >  2:1711198/1‑93 (MQ=255)

                                                             agccagccAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGc                           <  2:3670070/93‑1 (MQ=255)

                                                             agccagccAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGc                           <  1:1830809/93‑1 (MQ=255)

                                                              gccagccaGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCg                          >  1:5041165/1‑93 (MQ=255)

                                                              gccagccaGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCg                          >  1:497623/1‑93 (MQ=255)

                                                                cagccagATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTa                        <  2:1245856/93‑1 (MQ=255)

                                                                cagccagATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTa                        <  1:5885841/93‑1 (MQ=255)

                                                                 agccagATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTAc                       >  1:3205570/1‑93 (MQ=255)

                                                                  gccagATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACg                      <  1:4864359/93‑1 (MQ=255)

                                                                  gccagATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACg                      <  2:624054/93‑1 (MQ=255)

                                                                  gccagATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACg                      <  2:4533157/93‑1 (MQ=255)

                                                                   ccagATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGt                     <  2:4129713/93‑1 (MQ=255)

                                                                    cagATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGtt                    >  2:3052877/1‑93 (MQ=255)

                                                                    cagATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGGTCGCTGCAAAGCGTACGtt                    >  2:2832598/1‑93 (MQ=255)

                                                                     agATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTc                   >  1:1216809/1‑93 (MQ=255)

                                                                     agATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTc                   <  2:3808150/93‑1 (MQ=255)

                                                                      gATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTcc                  <  1:1422299/93‑1 (MQ=255)

                                                                       aTACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCa                 <  1:4180259/93‑1 (MQ=255)

                                                                       aTACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCa                 <  2:252777/93‑1 (MQ=255)

                                                                        tACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCAg                <  2:5066881/93‑1 (MQ=255)

                                                                        tACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCAg                <  1:1518931/93‑1 (MQ=255)

                                                                        tACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGGTCCAg                >  1:904696/1‑93 (MQ=255)

                                                                         acacCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCAgc               >  2:4777875/1‑93 (MQ=255)

                                                                           acCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCAgcgc             <  1:3860779/93‑1 (MQ=255)

                                                                            ccGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCAGCGcc            >  1:4404091/1‑93 (MQ=255)

                                                                             cGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCCGCGCCa           >  2:669184/1‑93 (MQ=255)

                                                                             cGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCAGCGccc           >  1:6135057/1‑92 (MQ=255)

                                                                             cGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCAGCGCCa           <  2:1953526/93‑1 (MQ=255)

                                                                             cGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGGTCGCTGCAAAGCGTACGTTCCCGCGCCa           >  2:21960/1‑93 (MQ=255)

                                                                              gTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCAGCGCCAg          <  2:408813/93‑1 (MQ=255)

                                                                              gTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCAGCGCCAg          >  2:494042/1‑93 (MQ=255)

                                                                               tttGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCAGCGCCAGc         >  1:5302350/1‑93 (MQ=255)

                                                                                   gtggtggGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCAGCGCCAGCCTCa     >  1:1099584/1‑93 (MQ=255)

                                                                                   gtggtggGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCAGCGCCAGCCTCa     <  2:3625201/93‑1 (MQ=255)

                                                                                    tggtggGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCAGCGCCAGCCTCaa    <  1:2037090/93‑1 (MQ=255)

                                                                                    tggtggGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCAGCGCCAGCCTCaa    <  1:2661828/93‑1 (MQ=255)

                                                                                     ggtggGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGGTCGCTGCAAAGCGTACGTTCCAGCGCCAGCCTccaa   >  2:1408488/1‑90 (MQ=255)

CGACAGCTGCGCGGTAGCGCAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGACAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCAGCGCCAGCCTCAATA  >  NC_000913/1136306‑1136484

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`