BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,145,923	T→C	intergenic (‑66/‑94)	yceF ← / → yceD	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,145,923	0	T	C	100.0%	702.4 / NA	216	intergenic (‑66/‑94)	yceF/yceD	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (106/110); total (106/110)

Only 100 of 224 total aligned reads displayed.

ATATAGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGTAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAATATGCGC  >  NC_000913/1145834‑1146011

atatAGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAAc                                                                                       >  2:3587771/1‑93 (MQ=255)

 tataGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAAcc                                                                                      <  1:1375295/93‑1 (MQ=255)

 tataGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAAcc                                                                                      >  1:3801250/1‑93 (MQ=255)

  ataGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCCAccc                                                                                     >  2:6228734/1‑93 (MQ=255)

  ataGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAAccc                                                                                     >  2:1659778/1‑93 (MQ=255)

  ataGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAAccc                                                                                     >  2:2441132/1‑93 (MQ=255)

  ataGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAAccc                                                                                     <  2:3723039/93‑1 (MQ=255)

    aGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAAccccc                                                                                   <  2:6207342/93‑3 (MQ=255)

    aGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGc                                                                                   <  1:965705/93‑1 (MQ=255)

    aGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGc                                                                                   <  2:501829/93‑1 (MQ=255)

     gCGTCTTGATGATAACCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGAAGAAAGCCGCa                                                                                  >  2:4516845/1‑93 (MQ=255)

     gCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCa                                                                                  >  1:3438188/1‑93 (MQ=255)

     gCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCa                                                                                  >  2:4884421/1‑93 (MQ=255)

      cGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCaa                                                                                 <  2:5708068/93‑1 (MQ=255)

        tATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTATGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAAtg                                                                               <  1:4448626/93‑1 (MQ=255)

         aTTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAAtgt                                                                              >  2:2703804/1‑93 (MQ=255)

          ttGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAAtgtg                                                                             >  1:5975579/1‑93 (MQ=255)

            gatgatAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTTTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAAtgtgtg                                                                           <  2:3386222/93‑1 (MQ=255)

             atgatAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGc                                                                          >  2:2541135/1‑93 (MQ=255)

               gatAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGa                                                                        >  1:4188179/1‑93 (MQ=255)

               gatAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGa                                                                        >  1:4713401/1‑93 (MQ=255)

               gatAGCCATTTTAAACTATGCGCTTCGTTTAGCAGGTTGATGTTTTTTATCAGCACTGAACGAAAATAAAGCAGCAACCAGCAATGTGTGCGa                                                                        >  2:4914248/1‑93 (MQ=255)

                atAGCCATTTTAAACTATGCGCTGCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGaa                                                                       <  2:4271959/93‑1 (MQ=255)

                 tAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAat                                                                      >  2:5920593/1‑93 (MQ=255)

                 tAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAat                                                                      >  1:5284724/1‑93 (MQ=255)

                     cATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAattatt                                                                  >  1:2390092/1‑93 (MQ=255)

                      tgtttAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTg                                                                 <  1:5189217/91‑1 (MQ=255)

                       ttttAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTgg                                                                >  2:548238/1‑93 (MQ=255)

                       ttttAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTgg                                                                >  2:1555747/1‑93 (MQ=255)

                        tttAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGc                                                               <  2:2844369/93‑1 (MQ=255)

                         ttAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCa                                                              >  2:872498/1‑93 (MQ=255)

                         ttAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCa                                                              >  1:2876528/1‑93 (MQ=255)

                           aaaCTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCaaa                                                            <  1:2724069/93‑1 (MQ=255)

                            aaCTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCaaaa                                                           <  2:310735/93‑1 (MQ=255)

                            aaCTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCaaaa                                                           <  1:224497/93‑1 (MQ=255)

                             aCTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAg                                                          >  1:725500/1‑93 (MQ=255)

                               tATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGc                                                        <  2:2932213/93‑1 (MQ=255)

                                 tGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTCTTGGCATAAGGCaa                                                      >  2:1100668/1‑93 (MQ=255)

                                 tGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCaa                                                      <  2:3775252/93‑1 (MQ=255)

                                 tGCGCTTCGTTTTGCAGGTTGACGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCaa                                                      >  2:5075996/1‑93 (MQ=255)

                                  gcgcTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAAc                                                     <  1:208523/93‑1 (MQ=255)

                                  gcgcTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAAc                                                     <  2:3148940/93‑1 (MQ=255)

                                  gcgcTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAAc                                                     <  1:4318217/93‑1 (MQ=255)

                                    gcTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACca                                                   <  1:5091625/93‑1 (MQ=255)

                                     cTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACcac                                                  <  1:741518/93‑1 (MQ=255)

                                      ttCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACcaca                                                 >  2:4369843/1‑93 (MQ=255)

                                      ttCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACcaca                                                 >  1:6165300/1‑93 (MQ=255)

                                      ttCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACcaca                                                 >  2:3496687/1‑93 (MQ=255)

                                      ttCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACcaca                                                 >  2:342136/1‑93 (MQ=255)

                                      ttCGATTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACcaca                                                 <  2:2651777/93‑1 (MQ=255)

                                       tCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAGCCACAg                                                <  2:485814/93‑1 (MQ=255)

                                       tCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAg                                                >  2:3321879/1‑93 (MQ=255)

                                         gTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGc                                              <  2:2873843/93‑1 (MQ=255)

                                         gTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGc                                              <  2:1351611/93‑1 (MQ=255)

                                         gTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGc                                              <  2:5347039/93‑1 (MQ=255)

                                         gTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGc                                              <  1:4799467/93‑1 (MQ=255)

                                          ttttGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCt                                             >  2:1161722/1‑93 (MQ=255)

                                                aGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCttt                                       <  1:5528326/93‑1 (MQ=255)

                                                 ggTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCtttt                                      >  1:393880/1‑93 (MQ=255)

                                                 ggTTGAGGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCtttt                                      >  2:5237571/1‑93 (MQ=255)

                                                  gTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCttttt                                     >  1:5342161/1‑93 (MQ=255)

                                                  gTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCttttt                                     <  2:4489505/93‑1 (MQ=255)

                                                   ttGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTc                                    <  2:1810181/93‑1 (MQ=255)

                                                     gATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCtt                                  >  2:2179196/1‑93 (MQ=255)

                                                     gATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCtt                                  >  1:7791/1‑93 (MQ=255)

                                                       tgtttgttATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTg                                >  1:3078791/1‑93 (MQ=255)

                                                        gtttgttATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGa                               >  1:4026387/1‑93 (MQ=255)

                                                        gtttgttATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGa                               <  1:1290290/93‑1 (MQ=255)

                                                        gtttgttATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGa                               <  2:1062785/93‑1 (MQ=255)

                                                         tttgttATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGAc                              >  1:3633478/1‑93 (MQ=255)

                                                         tttgttATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGAc                              >  1:1040593/1‑93 (MQ=255)

                                                             ttATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTa                          >  1:3852763/1‑93 (MQ=255)

                                                              tATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTAt                         >  1:628678/1‑93 (MQ=255)

                                                              tATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTAt                         <  1:1536212/93‑1 (MQ=255)

                                                              tATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTAt                         <  2:3780094/93‑1 (MQ=255)

                                                               aTCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATg                        >  2:4562701/1‑93 (MQ=255)

                                                                tCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGa                       <  1:842470/93‑1 (MQ=255)

                                                                tCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGa                       <  1:4220138/93‑1 (MQ=255)

                                                                tCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGa                       >  2:2929422/1‑93 (MQ=255)

                                                                  aGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACg                     >  2:6164186/1‑93 (MQ=255)

                                                                   gCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGt                    <  2:4350206/93‑1 (MQ=255)

                                                                   gCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGt                    >  1:650591/1‑93 (MQ=255)

                                                                   gCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGt                    >  2:2137707/1‑93 (MQ=255)

                                                                    cACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAGCCACAGGCTGCCTTTTTCTTTGACTCTATGACGtt                   <  2:1775033/93‑1 (MQ=255)

                                                                     aCTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTa                  >  1:5636107/1‑93 (MQ=255)

                                                                       tGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACa                <  1:1783066/93‑1 (MQ=255)

                                                                        gAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACaa               >  2:2916160/1‑93 (MQ=255)

                                                                        gAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACaa               >  2:2235029/1‑93 (MQ=255)

                                                                         aaCGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACaaa              <  2:4457050/93‑1 (MQ=255)

                                                                         aaCGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACaaa              <  2:4042172/93‑1 (MQ=255)

                                                                         aaCGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACaaa              <  2:2996452/93‑1 (MQ=255)

                                                                         aaCGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACaaa              >  1:4997882/1‑93 (MQ=255)

                                                                             aaaaTAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTa          >  2:4139984/1‑93 (MQ=255)

                                                                             aaaaTAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTa          <  2:5372205/93‑1 (MQ=255)

                                                                             aaaaTAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTa          <  1:1175367/93‑1 (MQ=255)

                                                                                aTAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAata       <  1:5645753/93‑1 (MQ=255)

                                                                                aTAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAata       <  1:2546847/93‑1 (MQ=255)

                                                                                   aaGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAATATgc    <  1:5821931/93‑1 (MQ=255)

                                                                                    agcagcAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAATATgcg   >  2:1422170/1‑93 (MQ=255)

                                                                                     gcagcaACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAATATgcgc  <  2:5654053/93‑1 (MQ=255)

ATATAGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGTAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAATATGCGC  >  NC_000913/1145834‑1146011

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`