BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,148,033	A→G	T18A (ACA→GCA)	fabH →	3‑oxoacyl‑[acyl‑carrier‑protein] synthase III

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,148,033	0	A	G	100.0%	652.3 / NA	202	T18A (ACA→GCA)	fabH	3‑oxoacyl‑[acyl‑carrier‑protein] synthase III
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (125/77); total (125/77)

Only 100 of 213 total aligned reads displayed.

GCAAGTGACGGTATATAACCGAAAAGTGACTGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCCGCGCCA  >  NC_000913/1147943‑1148122

gCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCa                                                                                         >  2:2908632/1‑93 (MQ=255)

gCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCAAACAAGTGCGGGCa                                                                                         >  2:4621848/1‑93 (MQ=255)

 cAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCaa                                                                                        >  2:5721614/1‑93 (MQ=255)

     tGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGc                                                                                    <  2:3055320/93‑1 (MQ=255)

     tGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGc                                                                                    >  2:4287003/1‑93 (MQ=255)

      gACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGcc                                                                                   <  2:3673195/93‑1 (MQ=255)

       aCGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCg                                                                                  >  2:2483869/1‑93 (MQ=255)

        cGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGa                                                                                 >  2:5863075/1‑93 (MQ=255)

          gTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGAtt                                                                               >  2:1856302/1‑93 (MQ=255)

           tatataACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGAttt                                                                              >  2:5574129/1‑93 (MQ=255)

            atataACCGAAAAGTGACCGAGCTTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTg                                                                             <  1:2689110/93‑1 (MQ=255)

             tataACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTgg                                                                            <  2:727608/93‑1 (MQ=255)

             tataACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTgg                                                                            >  1:4318867/1‑93 (MQ=255)

              ataACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGa                                                                           >  2:3105279/1‑93 (MQ=255)

              ataACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGa                                                                           <  2:4313641/93‑1 (MQ=255)

               taACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGaa                                                                          <  1:1096942/93‑1 (MQ=255)

               taACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGaa                                                                          <  2:6208430/93‑1 (MQ=255)

                 aCCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGACCAAGTGCGGGCAAACGCCGGTTTGGaaaa                                                                        >  2:1572953/1‑93 (MQ=255)

                 aCCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGaaaa                                                                        >  2:5196803/1‑93 (MQ=255)

                  ccGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGaaaaa                                                                       <  2:2205416/93‑1 (MQ=255)

                   cGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGaaaaaa                                                                      >  2:2641301/1‑93 (MQ=255)

                   cGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGaaaaaa                                                                      >  1:4089640/1‑93 (MQ=255)

                   cGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGaaaaaa                                                                      >  1:1432649/1‑93 (MQ=255)

                    gAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAAt                                                                     <  1:5263664/93‑1 (MQ=255)

                    gAAAAGGGACCGAGCGTACATGTATACGAAAGTTATTGGCACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAGAt                                                                     >  2:2257809/1‑93 (MQ=255)

                     aaaaGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAAtg                                                                    >  1:2601306/1‑93 (MQ=255)

                     aaaaGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAAtg                                                                    <  1:4923045/93‑1 (MQ=255)

                       aaGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAAtggt                                                                  >  1:3952604/1‑93 (MQ=255)

                       aaGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAAtggt                                                                  <  1:2553001/93‑1 (MQ=255)

                        aGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAAtggtg                                                                 <  2:6284716/93‑1 (MQ=255)

                          tGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGa                                                               >  1:2629009/1‑93 (MQ=255)

                          tGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGa                                                               <  1:1059775/93‑1 (MQ=255)

                           gACCGAGCGTCAATGGATACGAAGAATATTGGGAATTGCCGGTCTCTGCCCCAAACAGTGCGGGGAAACGCCGATTTGGAAAAAATGGTGGac                                                              >  2:4983934/1‑93 (MQ=255)

                             ccgAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGacac                                                            >  2:4708695/3‑93 (MQ=255)

                              cgAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACAcc                                                           >  1:94501/2‑93 (MQ=255)

                                aGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACctc                                                         >  2:4515126/1‑93 (MQ=255)

                                aGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACctc                                                         <  2:365095/93‑1 (MQ=255)

                                aGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACctc                                                         >  1:6044575/1‑93 (MQ=255)

                                 gCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACctct                                                        <  2:5657088/93‑1 (MQ=255)

                                  cGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTg                                                       >  1:1135206/1‑93 (MQ=255)

                                  cGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAAAGGTGGAAACctctt                                                       >  2:3245547/1‑92 (MQ=255)

                                    tACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGAc                                                     <  1:5963354/93‑1 (MQ=255)

                                     aCATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACg                                                    >  2:1891975/1‑93 (MQ=255)

                                     aCATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACg                                                    >  1:3827897/1‑93 (MQ=255)

                                      cATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACgg                                                   >  1:462224/1‑92 (MQ=255)

                                      cATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGa                                                   <  2:6054251/93‑1 (MQ=255)

                                        tGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGt                                                 >  2:3901585/1‑93 (MQ=255)

                                        tGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGt                                                 <  2:1333004/93‑1 (MQ=255)

                                         gTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTg                                                <  1:559578/93‑1 (MQ=255)

                                         gTAGACGAGGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATGTGGAAAAAATGGTGGACACCTCTGACGAGTg                                                <  2:358199/93‑1 (MQ=255)

                                           ataCGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGa                                              >  1:2338516/1‑93 (MQ=255)

                                           ataCGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGa                                              <  1:2236877/93‑1 (MQ=255)

                                            taCGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGAt                                             >  2:1286794/1‑93 (MQ=255)

                                            taCGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGAt                                             >  1:2060578/1‑93 (MQ=255)

                                              cGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTg                                           >  1:514324/1‑93 (MQ=255)

                                              cGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTg                                           >  1:5896928/1‑93 (MQ=255)

                                               gAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGt                                          <  1:3139234/93‑1 (MQ=255)

                                               gAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGt                                          <  1:789513/93‑1 (MQ=255)

                                               gAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGt                                          >  1:4071439/1‑93 (MQ=255)

                                                 aGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCa                                        <  2:1509753/93‑1 (MQ=255)

                                                 aGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCa                                        <  1:5744843/93‑1 (MQ=255)

                                                  gATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCAc                                       <  2:791421/93‑1 (MQ=255)

                                                    ttattGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTc                                     >  2:4681952/1‑93 (MQ=255)

                                                     tattGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCg                                    <  1:985148/93‑1 (MQ=255)

                                                     tattGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCg                                    >  2:4964665/1‑93 (MQ=255)

                                                     tattGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCg                                    >  2:4908799/1‑93 (MQ=255)

                                                       ttGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTa                                  >  2:1139834/1‑93 (MQ=255)

                                                        tGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTAc                                 >  1:364072/1‑93 (MQ=255)

                                                         ggTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTAcc                                >  2:1994307/1‑93 (MQ=255)

                                                         ggTACTGGCAGCTATCTACCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACCCCTCTGACGAGTGGATTGTCACTCGTAcc                                <  2:3792869/93‑1 (MQ=255)

                                                          gTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCg                               >  1:1556082/1‑93 (MQ=255)

                                                          gTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCg                               >  2:4942109/1‑93 (MQ=255)

                                                          gTACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCg                               >  1:501210/1‑93 (MQ=255)

                                                           tACTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCgg                              >  1:5391577/1‑93 (MQ=255)

                                                             cTGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTAACGAGTGGATTGTCACTCGTACCGGTa                            <  1:6300117/93‑1 (MQ=255)

                                                              tGGCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTAt                           <  1:2027717/93‑1 (MQ=255)

                                                               ggCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATc                          <  1:2884021/93‑1 (MQ=255)

                                                               ggCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATc                          <  1:3740743/93‑1 (MQ=255)

                                                               ggCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATc                          >  2:2026941/1‑93 (MQ=255)

                                                                gCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATcc                         >  1:3345380/1‑93 (MQ=255)

                                                                gCAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATcc                         >  2:6167763/1‑93 (MQ=255)

                                                                 cAGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCcg                        >  1:316867/1‑93 (MQ=255)

                                                                  aGCTATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCcgc                       <  2:4096934/93‑1 (MQ=255)

                                                                     tATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGaa                    >  2:230757/1‑93 (MQ=255)

                                                                     tATCTGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGaa                    >  1:1212239/1‑93 (MQ=255)

                                                                         tGCCCGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGcc                >  1:6029993/1‑93 (MQ=255)

                                                                            ccGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCcaca             <  2:5295584/93‑1 (MQ=255)

                                                                             cGAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACAt            >  1:4470079/1‑93 (MQ=255)

                                                                              gAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACAtt           <  2:5086209/93‑1 (MQ=255)

                                                                              gAACAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACAtt           <  2:5505673/93‑1 (MQ=255)

                                                                               aaCAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACAttc          >  1:1152928/1‑92 (MQ=255)

                                                                               aaCAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTg          >  2:822902/1‑93 (MQ=255)

                                                                                aCAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGTACGCCACATTGc         >  2:309022/1‑93 (MQ=255)

                                                                                aCAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGc         >  1:1270300/1‑93 (MQ=255)

                                                                                 cAAGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGcc        >  1:449209/1‑93 (MQ=255)

                                                                                   aGTGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCcgc      <  2:3196505/93‑1 (MQ=255)

                                                                                     tGCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCCgcgc    >  1:3447740/1‑93 (MQ=255)

                                                                                      gCGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCCGCGcc   <  2:1793583/93‑1 (MQ=255)

                                                                                       cGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCCGCGCCa  <  1:5447585/93‑1 (MQ=255)

                                                                                       cGGGCAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCCGCGCCa  >  2:4211503/1‑93 (MQ=255)

GCAAGTGACGGTATATAACCGAAAAGTGACTGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCCGCGCCA  >  NC_000913/1147943‑1148122

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`