BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	115,788	A→G	C438R (TGC→CGC)	hofB ←	HofB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	115,788	0	A	G	100.0%	553.0 / NA	174	C438R (TGC→CGC)	hofB	HofB
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (93/81); total (93/81)

Only 100 of 200 total aligned reads displayed.

CCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAA  >  NC_000913/115698‑115877

ccaGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAggcggc                                                                                          <  1:1076566/93‑1 (MQ=255)

    cgcCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑tt                                                                                     <  2:3572690/93‑1 (MQ=255)

        agagTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCa                                                                                 >  2:1362267/1‑93 (MQ=255)

         gagTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCaa                                                                                >  1:892375/1‑93 (MQ=255)

           gTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCaaaa                                                                              >  2:2279344/1‑93 (MQ=255)

            ttGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCaaaaa                                                                             <  1:3625104/93‑1 (MQ=255)

             tGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAg                                                                            <  1:6131364/93‑1 (MQ=255)

              gCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGc                                                                           <  1:3486471/93‑1 (MQ=255)

              gCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGc                                                                           <  2:3005164/93‑1 (MQ=255)

              gCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGc                                                                           <  1:5466773/93‑1 (MQ=255)

              gCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGc                                                                           <  1:2250973/93‑1 (MQ=255)

               cTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCg                                                                          >  1:1708900/1‑93 (MQ=255)

               cTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCg                                                                          <  2:2226295/93‑1 (MQ=255)

               attACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCg                                                                          <  1:6048622/92‑1 (MQ=255)

                 tACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTa                                                                        <  2:4130240/93‑1 (MQ=255)

                  aCTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTAc                                                                       >  2:1005718/1‑93 (MQ=255)

                    tCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGc                                                                     <  2:5338493/93‑1 (MQ=255)

                     cGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCa                                                                    <  2:5028508/93‑1 (MQ=255)

                     cGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCa                                                                    <  1:1743488/93‑1 (MQ=255)

                      gCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCAt                                                                   <  1:5968028/93‑1 (MQ=255)

                      gCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCAt                                                                   >  2:3861719/1‑93 (MQ=255)

                      gCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCATTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCAt                                                                   <  1:4436604/93‑1 (MQ=255)

                       ccATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCATAAAGCGTACGCATa                                                                  <  1:2397099/93‑1 (MQ=255)

                       ccATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATa                                                                  >  1:65452/1‑93 (MQ=255)

                       ccATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATa                                                                  >  2:2007256/1‑93 (MQ=255)

                       ccATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATa                                                                  >  2:5523183/1‑93 (MQ=255)

                        cATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATAc                                                                 <  1:502606/93‑1 (MQ=255)

                        cATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATAc                                                                 >  1:82863/1‑93 (MQ=255)

                        cATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATAc                                                                 >  1:3832258/1‑93 (MQ=255)

                          tGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATAccc                                                               >  2:5765760/1‑93 (MQ=255)

                          tGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATAccc                                                               >  2:6075573/1‑93 (MQ=255)

                          tGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATAccc                                                               >  1:5086488/1‑93 (MQ=255)

                          tGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTACTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATAccc                                                               <  2:1587420/93‑1 (MQ=255)

                           gCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCg                                                              >  1:4112252/1‑93 (MQ=255)

                            cGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGc                                                             <  2:329683/93‑1 (MQ=255)

                            cGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGc                                                             >  2:4852103/1‑93 (MQ=255)

                            cGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGc                                                             <  2:4553358/93‑1 (MQ=255)

                             ggCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGcc                                                            >  2:5584102/1‑93 (MQ=255)

                              gCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCt                                                           >  1:3113499/1‑93 (MQ=255)

                               cATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTg                                                          <  2:4863373/93‑1 (MQ=255)

                                 tCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTc                                                        >  1:5221289/1‑93 (MQ=255)

                                   cccAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTcgt                                                      >  1:2527800/1‑93 (MQ=255)

                                     cAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTcgtgc                                                    >  1:3071618/1‑93 (MQ=255)

                                     cAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTcgtgc                                                    >  2:5099390/1‑93 (MQ=255)

                                        tACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTcgtgcgtg                                                 <  2:4156493/93‑1 (MQ=255)

                                        tACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTcgtgcgtg                                                 >  1:5917556/1‑93 (MQ=255)

                                            cgGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAACCGTACGCATACGCGCCTGTCGTGCGTGCGtt                                             >  2:3191582/1‑93 (MQ=255)

                                             ggATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGttt                                            >  1:102061/1‑93 (MQ=255)

                                             ggATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGttt                                            >  1:5733637/1‑93 (MQ=255)

                                              gATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATCCCCGCCTGTCGTGCGTGCGTTTc                                           <  1:2221857/93‑1 (MQ=255)

                                              gATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTc                                           >  1:1553463/1‑93 (MQ=255)

                                               aTTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACCCATACCCGCCTGTCGTGCGTGCGTTTcc                                          <  1:4421853/93‑1 (MQ=255)

                                                 tAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATCCCCGCCTGTCGTGCGTGCGTTTCCAg                                        <  1:2451609/93‑1 (MQ=255)

                                                 tAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAg                                        >  1:845167/1‑93 (MQ=255)

                                                 tAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAg                                        <  1:2846429/93‑1 (MQ=255)

                                                 tAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAg                                        >  1:5838286/1‑93 (MQ=255)

                                                   aCTCTTAAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCg                                      <  2:450703/93‑1 (MQ=255)

                                                     tctTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGAt                                    >  2:4660193/1‑93 (MQ=255)

                                                     tctTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGAt                                    >  1:6214680/1‑93 (MQ=255)

                                                     tctTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGAt                                    >  2:4237317/1‑93 (MQ=255)

                                                       ttCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTc                                  >  2:6288001/1‑93 (MQ=255)

                                                       ttCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTc                                  >  1:4195065/1‑93 (MQ=255)

                                                       ttCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTc                                  <  1:5801089/93‑1 (MQ=255)

                                                           aaGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATCCCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACg                              <  2:5904100/93‑1 (MQ=255)

                                                           aaGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACg                              <  1:360294/93‑1 (MQ=255)

                                                            aGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATCCCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGt                             <  2:2701575/93‑1 (MQ=255)

                                                            aGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGt                             <  2:2887983/93‑1 (MQ=255)

                                                              gtggtAAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATCCCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCg                           <  2:3459973/93‑1 (MQ=255)

                                                               tggtTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCgg                          <  1:1768694/93‑1 (MQ=255)

                                                                ggtTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATCCCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGt                         <  2:4065187/93‑1 (MQ=255)

                                                                ggtTAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGt                         <  2:824151/93‑1 (MQ=255)

                                                                ggtTAAGCCTTGCTCTACGGCCAGGCGCCCT‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGt                         <  2:2438767/93‑1 (MQ=255)

                                                                  ttAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTAt                       >  1:5443270/1‑93 (MQ=255)

                                                                  ttAAGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTAt                       >  1:3421420/1‑93 (MQ=255)

                                                                    aggCCTCGCTCTACGGCCAGGC‑GCCGTTTTTCAAAAAGCGTCCGCATCCCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTa                     <  2:1285432/91‑1 (MQ=255)

                                                                    aaGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACACGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTa                     >  1:6285698/1‑93 (MQ=255)

                                                                     aGCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAg                    >  2:332934/1‑93 (MQ=255)

                                                                      gCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGc                   >  1:5474353/1‑93 (MQ=255)

                                                                      gCCTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGc                   >  1:1840478/1‑93 (MQ=255)

                                                                        cTTGCTCTACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCgg                 >  1:2719934/1‑93 (MQ=255)

                                                                            ctctACGGCCAGGCGGCCT‑TTTTCAAAAAGCGTACGCATCCCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAAt             <  2:5232046/93‑1 (MQ=255)

                                                                            ctctACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAAt             >  2:2620320/1‑93 (MQ=255)

                                                                             tctACGGCCAGGCGGCCG‑TTTTCAAAAGGCGTACGCATCCCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATa            <  1:3611398/93‑1 (MQ=255)

                                                                             tctACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATCCCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATa            <  1:2359018/93‑1 (MQ=255)

                                                                             tctACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATa            <  1:2087131/93‑1 (MQ=255)

                                                                             tctACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATAACCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATa            >  2:2865512/1‑93 (MQ=255)

                                                                              ctACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATCCCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATaa           <  1:933710/93‑1 (MQ=255)

                                                                              ctACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATaa           <  1:4097926/93‑1 (MQ=255)

                                                                               tACGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAg          <  2:4396123/93‑1 (MQ=255)

                                                                                aCGGCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATCCCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGc         <  2:5288189/93‑1 (MQ=255)

                                                                                  ggCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATCCCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTg       <  1:4322204/93‑1 (MQ=255)

                                                                                  gcccAGGCGGCCT‑TTTTAAAAAAGCGTACGCATCCCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTg       <  1:1513600/91‑1 (MQ=255)

                                                                                   gCCAGGCGGCCG‑TTTTCAAAAAGCGTACGCATCCCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGa      <  1:4918612/93‑1 (MQ=255)

                                                                                   gCCAGCCGGCCG‑TTTCCAAAAAGCGTACGCATCCCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGa      <  1:2006146/93‑1 (MQ=255)

                                                                                     cAGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACg    >  2:1679421/1‑93 (MQ=255)

                                                                                      aGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGa   >  2:5182753/1‑93 (MQ=255)

                                                                                      aGGCGGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGa   <  1:1465099/93‑1 (MQ=255)

                                                                                       ggcggcCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGaa  >  2:3678937/1‑93 (MQ=255)

                                                                                       ggcggcCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGaa  <  2:1509794/93‑1 (MQ=255)

                                                                                       ggCCGCTG‑TTTTCAAAAAGCGGACGCATCCCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGaa  <  2:1475004/93‑1 (MQ=255)

CCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCG‑TTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAA  >  NC_000913/115698‑115877

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`