BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,243,418	T→C	V111V (GTA→GTG)	ycgR ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,243,418	0	T	C	100.0%	799.5 / NA	249	V111V (GTA→GTG)	ycgR	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (146/103); total (146/103)

Only 100 of 261 total aligned reads displayed.

GAAACGTAACGTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGAC  >  NC_000913/1243328‑1243507

gAAACGTAACGTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCAc                                                                                         >  1:1676902/1‑93 (MQ=255)

     gtaacgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAAcc                                                                                    <  1:2872353/93‑1 (MQ=255)

      taacgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCa                                                                                   <  1:1991343/93‑1 (MQ=255)

       aacgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCAt                                                                                  <  2:5686570/93‑1 (MQ=255)

       aacgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCAt                                                                                  >  2:2108205/1‑93 (MQ=255)

        acgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATa                                                                                 >  2:5581950/1‑93 (MQ=255)

        acgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATa                                                                                 <  1:301326/93‑1 (MQ=255)

        acgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATa                                                                                 <  2:4638601/93‑1 (MQ=255)

         cgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATaa                                                                                >  2:5811736/1‑93 (MQ=255)

         agtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATaa                                                                                <  2:3103234/92‑1 (MQ=255)

           taCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAgg                                                                              >  1:5783936/1‑93 (MQ=255)

           taCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAgg                                                                              >  1:249346/1‑93 (MQ=255)

           taCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAgg                                                                              >  1:4183282/1‑93 (MQ=255)

           taCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAgg                                                                              <  2:2780946/93‑1 (MQ=255)

             cTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTg                                                                            >  2:1150773/1‑93 (MQ=255)

               gTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAgggggg                                                                          >  1:787328/1‑93 (MQ=255)

               gTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTggg                                                                          >  2:2402480/1‑93 (MQ=255)

               gTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTggg                                                                          <  1:3537037/93‑1 (MQ=255)

                ttATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGa                                                                         <  1:3604838/93‑1 (MQ=255)

                 tATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAg                                                                        >  1:5839098/1‑93 (MQ=255)

                 tATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAg                                                                        <  2:6053733/93‑1 (MQ=255)

                  aTCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAgg                                                                       >  2:49527/1‑93 (MQ=255)

                  aTCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAgg                                                                       >  1:5264110/1‑93 (MQ=255)

                   tCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCCTAAGGTGGGAGGc                                                                      >  2:2626702/1‑93 (MQ=255)

                   tCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGc                                                                      <  1:2604911/93‑1 (MQ=255)

                   tCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGc                                                                      <  1:3730753/93‑1 (MQ=255)

                   tCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGc                                                                      >  2:3284197/1‑93 (MQ=255)

                     cGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcgg                                                                    >  1:2183361/1‑93 (MQ=255)

                     cGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcgg                                                                    >  1:1191515/1‑93 (MQ=255)

                      gCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggt                                                                   >  2:2054223/1‑93 (MQ=255)

                       ccAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggta                                                                  >  1:3830211/1‑93 (MQ=255)

                        cAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggtac                                                                 >  1:600557/1‑93 (MQ=255)

                        cAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggtac                                                                 <  2:13571/93‑1 (MQ=255)

                        cAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggtac                                                                 <  1:919386/93‑1 (MQ=255)

                         aGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggtacg                                                                <  2:1587727/93‑1 (MQ=255)

                          gTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggtacgg                                                               >  2:1340608/1‑93 (MQ=255)

                            ttGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggtacggta                                                             >  1:1938123/1‑93 (MQ=255)

                            ttGGTCGCGCAAAATGAAGGCGGATGGAGTGGGACGGAGATGCGAAAATATCGGCGTTGTTGCTCAAGCCATAAGGTGGGAGGcggtacggta                                                             <  2:3880489/93‑1 (MQ=255)

                             tGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGtaa                                                            <  1:3233151/93‑1 (MQ=255)

                                tCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGtaataa                                                         >  1:5964752/1‑93 (MQ=255)

                                  tGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAAt                                                       >  1:1874383/1‑93 (MQ=255)

                                  tGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAAt                                                       <  2:372610/93‑1 (MQ=255)

                                     cAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGcc                                                    <  1:5198916/93‑1 (MQ=255)

                                      aaaaaTAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCg                                                   <  2:5069431/93‑1 (MQ=255)

                                         aaTAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGaa                                                <  1:3684028/93‑1 (MQ=255)

                                         aaTAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGaa                                                >  2:660073/1‑93 (MQ=255)

                                           tAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACTAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGc                                              <  1:4435422/93‑1 (MQ=255)

                                           tAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGc                                              >  2:4742669/1‑93 (MQ=255)

                                             aGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTg                                            <  2:3926444/93‑1 (MQ=255)

                                             aGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTg                                            <  1:1585766/93‑1 (MQ=255)

                                             aGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTg                                            >  1:3090237/1‑93 (MQ=255)

                                                  gATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGt                                       >  1:5476912/1‑93 (MQ=255)

                                                  gATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGt                                       >  2:3375861/1‑93 (MQ=255)

                                                  gATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGt                                       >  2:2298846/1‑93 (MQ=255)

                                                  gATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGt                                       >  1:1911562/1‑93 (MQ=255)

                                                      gAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTc                                   <  2:5782869/93‑1 (MQ=255)

                                                        gTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCAc                                 >  1:4732475/1‑93 (MQ=255)

                                                         tGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCAct                                >  2:2930921/1‑93 (MQ=255)

                                                          ggggCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCActc                               <  2:2003457/93‑1 (MQ=255)

                                                          ggggCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCActc                               <  1:1210905/93‑1 (MQ=255)

                                                          ggggCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCActc                               >  2:2168571/1‑93 (MQ=255)

                                                          ggggCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCActc                               <  2:5601128/93‑1 (MQ=255)

                                                          ggggCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCActc                               >  1:564908/1‑93 (MQ=255)

                                                              gggAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTctgct                           <  2:1758918/92‑1 (MQ=255)

                                                               ggAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTctgctg                          <  1:632008/93‑1 (MQ=255)

                                                               cgagaTGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTctgctg                          <  1:4136976/92‑1 (MQ=255)

                                                                gagaTGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGt                         >  1:1074550/1‑93 (MQ=255)

                                                                gagaTGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGt                         >  2:4851172/1‑93 (MQ=255)

                                                                gagaTGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGt                         >  2:5260304/1‑93 (MQ=255)

                                                                gagaTGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGt                         >  1:1399426/1‑93 (MQ=255)

                                                                gagaTGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGt                         >  1:2934512/1‑93 (MQ=255)

                                                                gagaTGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGGGGGAGGCGGTACGGAAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGt                         >  1:4612606/1‑93 (MQ=255)

                                                                 agaTGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTa                        >  1:3437161/1‑93 (MQ=255)

                                                                  gaTGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAg                       >  1:1060355/1‑93 (MQ=255)

                                                                   aTGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAgt                      <  1:2262522/93‑1 (MQ=255)

                                                                   aTGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAgt                      <  2:4270402/93‑1 (MQ=255)

                                                                      cGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAgttgt                   <  2:5332693/93‑1 (MQ=255)

                                                                        gAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTc                 >  1:2096281/1‑93 (MQ=255)

                                                                        gAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTc                 >  2:414492/1‑93 (MQ=255)

                                                                        gAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTc                 >  2:4596297/1‑93 (MQ=255)

                                                                         aaaTATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCa                <  1:5118616/93‑1 (MQ=255)

                                                                          aaTATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCaa               >  2:3688699/1‑93 (MQ=255)

                                                                           atatCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAAc              >  2:1034166/1‑93 (MQ=255)

                                                                           atatCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGGTGTTCAAc              <  2:6126937/93‑1 (MQ=255)

                                                                            tatCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACa             >  2:245222/1‑93 (MQ=255)

                                                                             atCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAg            >  2:2708044/1‑93 (MQ=255)

                                                                              tCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGt           >  2:3537832/1‑93 (MQ=255)

                                                                                 gCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTaaa        <  1:6122446/93‑1 (MQ=255)

                                                                                 gCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTaaa        >  2:4316931/1‑93 (MQ=255)

                                                                                  ggtcgtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAAc       <  2:4009128/92‑1 (MQ=255)

                                                                                  cgtcgtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAAc       <  1:5176912/93‑1 (MQ=255)

                                                                                  cgtcgtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAAc       <  1:3928335/93‑1 (MQ=255)

                                                                                   gtcgtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACt      <  1:2192009/93‑1 (MQ=255)

                                                                                   gtcgtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACt      >  2:1466031/1‑93 (MQ=255)

                                                                                    tcgtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTc     >  2:5380379/1‑93 (MQ=255)

                                                                                    tcgtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTc     <  1:6221085/93‑1 (MQ=255)

                                                                                    tcgtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTc     <  2:1232228/93‑1 (MQ=255)

                                                                                    tcgtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTc     <  2:1434861/93‑1 (MQ=255)

                                                                                      gtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGa   <  1:5379469/93‑1 (MQ=255)

                                                                                       ttGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGAc  >  2:4405489/1‑93 (MQ=255)

GAAACGTAACGTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGAC  >  NC_000913/1243328‑1243507

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`