BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,291,867	A→G	R93R (CGT→CGC)	hns ←	DNA‑binding protein HLP‑II

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,291,867	0	A	G	100.0%	584.3 / NA	182	R93R (CGT→CGC)	hns	DNA‑binding protein HLP‑II
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (92/90); total (92/90)

Only 100 of 189 total aligned reads displayed.

ATTGCTTTTTTGATTACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGACGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCAGCGATCAGCAT  >  NC_000913/1291778‑1291956

aTTGCTTTTTTGATTACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGgcgc                                                                                        >  2:3084225/1‑93 (MQ=255)

 ttGCTTTTTTGATTACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCt                                                                                       >  1:1092566/1‑93 (MQ=255)

   gCTTTTTTGATTACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCGACGTAGCTATATTTTGCCGGGGGCTGa                                                                                     >  2:3608960/1‑93 (MQ=255)

   gCTTTTTTGATTACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGa                                                                                     <  1:3566578/93‑1 (MQ=255)

    cTTTTTTGATTACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAg                                                                                    <  1:3780581/93‑1 (MQ=255)

      tttttGATTACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCa                                                                                  >  1:6274722/1‑93 (MQ=255)

      tttttGATTACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCa                                                                                  <  2:4737602/93‑1 (MQ=255)

      tttttGATTACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCa                                                                                  <  1:4414843/93‑1 (MQ=255)

         ttGATTACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGt                                                                               >  1:4104538/1‑93 (MQ=255)

            aTTACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTa                                                                            <  2:5518094/93‑1 (MQ=255)

               aCAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCt                                                                         >  1:4333637/1‑93 (MQ=255)

                 aGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCttt                                                                       <  2:4315865/93‑1 (MQ=255)

                 aGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCttt                                                                       >  1:6115985/1‑93 (MQ=255)

                 aGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCttt                                                                       <  1:1873877/93‑1 (MQ=255)

                  gCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTg                                                                      >  1:1408558/1‑93 (MQ=255)

                  gCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTg                                                                      >  1:2387514/1‑93 (MQ=255)

                  gCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTg                                                                      <  2:5423937/93‑1 (MQ=255)

                  gCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTg                                                                      >  2:4520651/1‑93 (MQ=255)

                   cTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTgg                                                                     <  1:1617694/93‑1 (MQ=255)

                    tGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGt                                                                    <  1:1122843/93‑1 (MQ=255)

                    tGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGt                                                                    >  2:370699/1‑93 (MQ=255)

                     ggAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTg                                                                   <  2:3001619/93‑1 (MQ=255)

                     ggAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTg                                                                   >  1:119193/1‑93 (MQ=255)

                      gAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGc                                                                  >  2:177304/1‑93 (MQ=255)

                        gTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCa                                                                <  1:5544331/93‑1 (MQ=255)

                         tACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAg                                                               >  2:3516137/1‑93 (MQ=255)

                           cGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGAt                                                             <  2:2465123/93‑1 (MQ=255)

                           cGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGAt                                                             >  2:652254/1‑93 (MQ=255)

                             gCCTTGGCCAGTCGAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGAttt                                                           >  2:6194848/1‑93 (MQ=255)

                             gCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGAttt                                                           >  2:763945/1‑93 (MQ=255)

                              ccTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTa                                                          >  2:1085735/1‑93 (MQ=255)

                              ccTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTa                                                          <  1:3139036/93‑1 (MQ=255)

                                ttGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAAc                                                        <  2:4921919/93‑1 (MQ=255)

                                 tGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACg                                                       <  1:2877810/93‑1 (MQ=255)

                                  ggCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACgg                                                      <  2:1427268/93‑1 (MQ=255)

                                  ggCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACgg                                                      <  1:4565690/93‑1 (MQ=255)

                                      aGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGgcagc                                                  >  2:1258735/1‑93 (MQ=255)

                                      aGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGgcagc                                                  <  1:2850234/93‑1 (MQ=255)

                                       gTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGgcagca                                                 <  2:3817992/93‑1 (MQ=255)

                                        tCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCaa                                                >  1:2200325/1‑93 (MQ=255)

                                        tCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCaa                                                <  1:3487127/93‑1 (MQ=255)

                                         ccAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAg                                               >  2:2272569/1‑93 (MQ=255)

                                          cAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAgg                                              <  1:5216344/93‑1 (MQ=255)

                                          cAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAgg                                              >  1:3345240/1‑93 (MQ=255)

                                          cAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAgg                                              <  1:2766652/93‑1 (MQ=255)

                                          cAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAgg                                              >  1:3647380/1‑93 (MQ=255)

                                           aGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGc                                             <  1:4277039/93‑1 (MQ=255)

                                            ggTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCt                                            <  2:5554879/93‑1 (MQ=255)

                                             gTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTa                                           >  2:5952157/1‑93 (MQ=255)

                                              ttttAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTAt                                          <  2:2915115/93‑1 (MQ=255)

                                              ttttAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTAt                                          >  2:3393969/1‑93 (MQ=255)

                                               tttAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTAtt                                         <  1:6261410/93‑1 (MQ=255)

                                               tttAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTAtt                                         >  1:5056668/1‑93 (MQ=255)

                                                ttAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTc                                        >  1:2078617/1‑93 (MQ=255)

                                                ttAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTc                                        <  2:2476406/93‑1 (MQ=255)

                                                ttAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTc                                        >  1:3986548/1‑93 (MQ=255)

                                                 tAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTca                                       >  1:1049346/1‑93 (MQ=255)

                                                       cGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAgtt                                 <  2:2987359/93‑1 (MQ=255)

                                                        gCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAgttc                                <  1:2520769/93‑1 (MQ=255)

                                                         ccGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAgttcg                               <  1:843072/93‑1 (MQ=255)

                                                          cGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAgttcgt                              >  1:4799632/1‑93 (MQ=255)

                                                          cGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAgttcgt                              <  1:5487848/93‑1 (MQ=255)

                                                           gTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAgttcgtt                             <  1:3867367/93‑1 (MQ=255)

                                                           gTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAgttcgtt                             <  1:3265663/93‑1 (MQ=255)

                                                            ttttCGTCAACGTAGCTATATTTTGCGGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAgttcgttc                            >  1:3185266/1‑93 (MQ=255)

                                                            ttttCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAgttcgttc                            <  2:519384/93‑1 (MQ=255)

                                                            ttttCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAgttcgttc                            <  2:5405276/93‑1 (MQ=255)

                                                                 gTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTc                       >  2:2833738/1‑93 (MQ=255)

                                                                  tCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGTTTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCa                      <  2:4384829/93‑1 (MQ=255)

                                                                  tCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCa                      <  2:1202049/93‑1 (MQ=255)

                                                                   cAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCaa                     <  1:2560957/93‑1 (MQ=255)

                                                                    aaCGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAAt                    >  2:197241/1‑93 (MQ=255)

                                                                    aaCGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAAt                    >  1:5359793/1‑93 (MQ=255)

                                                                     aCGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGTAAGGCTATTCAGCAGTTCGTTCGGGTCAAtt                   >  2:2737059/1‑92 (MQ=255)

                                                                     aCGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATa                   <  1:5888729/93‑1 (MQ=255)

                                                                     aCGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATa                   <  1:5273073/93‑1 (MQ=255)

                                                                       gTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATAcc                 <  2:2428667/93‑1 (MQ=255)

                                                                        tAGCTATATTTTGCCGGGCGCTGAGCTCGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCg                <  2:5091943/93‑1 (MQ=255)

                                                                        tAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCg                >  1:4697290/1‑93 (MQ=255)

                                                                        tAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGGCAATACCg                >  2:2642112/1‑93 (MQ=255)

                                                                         aGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGt               >  2:2366454/1‑93 (MQ=255)

                                                                         aGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGt               <  2:5728277/93‑1 (MQ=255)

                                                                          gCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTc              >  1:5647431/1‑93 (MQ=255)

                                                                           cTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCa             <  1:911178/93‑1 (MQ=255)

                                                                             atatTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCAGc           >  2:1637444/1‑93 (MQ=255)

                                                                             atatTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCAGc           >  1:691193/1‑93 (MQ=255)

                                                                             atatTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCAGc           >  2:834602/1‑93 (MQ=255)

                                                                              tatTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCAGCg          >  2:3178153/1‑93 (MQ=255)

                                                                              tatTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCAGCg          >  2:2231291/1‑93 (MQ=255)

                                                                              tatTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCAGCg          >  1:887034/1‑93 (MQ=255)

                                                                              tatTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCAGCg          >  1:325449/1‑93 (MQ=255)

                                                                               atTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCAGCGa         >  1:2147012/1‑93 (MQ=255)

                                                                               atTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCAGCGa         <  1:3019356/93‑1 (MQ=255)

                                                                                ttttGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCCGCGAt        >  2:4498419/1‑93 (MQ=255)

                                                                                  ttGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCAGCGATCa      <  1:3942336/93‑1 (MQ=255)

                                                                                  ttGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCAGCGATCa      <  1:3115843/93‑1 (MQ=255)

                                                                                    gCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCAGCGATCAGc    >  2:400066/1‑93 (MQ=255)

                                                                                     ccGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCAGCGATCAGCa   <  1:4938498/93‑1 (MQ=255)

                                                                                     ccGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCAGCGATCAGCa   <  1:2256583/93‑1 (MQ=255)

                                                                                      cGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCAGCGATCAGCAt  >  1:382343/1‑93 (MQ=255)

ATTGCTTTTTTGATTACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGACGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCAGCGATCAGCAT  >  NC_000913/1291778‑1291956

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`