BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,293,679	A→G	P187P (CCT→CCC)	ychG ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,293,679	0	A	G	99.6%	721.5 / ‑4.8	224	P187P (CCT→CCC)	ychG	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (110/113); total (110/114)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.61e-01

Only 100 of 238 total aligned reads displayed.

GGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAG  >  NC_000913/1293589‑1293768

ggTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACggg                                                                                         >  2:2875180/1‑93 (MQ=255)

   ttATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATa                                                                                      <  1:2533736/93‑1 (MQ=255)

   ttATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATa                                                                                      >  2:2038764/1‑93 (MQ=255)

    tATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATaa                                                                                     >  2:3634202/1‑93 (MQ=255)

    tATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATaa                                                                                     >  1:2784445/1‑93 (MQ=255)

    tATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATaa                                                                                     >  2:5507360/1‑93 (MQ=255)

    tATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATaa                                                                                     <  2:4391587/93‑1 (MQ=255)

     aTGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAAc                                                                                    >  2:1014102/1‑93 (MQ=255)

      tGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACg                                                                                   >  1:2106101/1‑93 (MQ=255)

      tGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACg                                                                                   <  1:4735687/93‑1 (MQ=255)

      tGGAAAAGTTGCTTTGAGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACg                                                                                   <  1:1416224/93‑1 (MQ=255)

       ggAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACgg                                                                                  <  1:1218881/93‑1 (MQ=255)

        gAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACggg                                                                                 <  1:4564973/93‑1 (MQ=255)

        gAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACggg                                                                                 <  1:3514442/93‑1 (MQ=255)

        gAAAAGGTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATTACggg                                                                                 >  2:2227067/1‑93 (MQ=255)

           aaGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGttt                                                                              <  2:4914112/93‑1 (MQ=255)

            aGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGtttt                                                                             <  1:688302/93‑1 (MQ=255)

              ttGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTg                                                                           <  2:515349/93‑1 (MQ=255)

                gCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGat                                                                         >  1:3430672/1‑93 (MQ=255)

                catttGGGTAAACAAAAAATGCGGCCCAAGAAGGGCACTGCCGTTCACTTAAGAGGAGCGGCACTATGTGTCACGGGATAACGGGTTTTTGat                                                                         <  2:2489692/91‑1 (MQ=255)

                 cTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGata                                                                        >  1:4879245/1‑93 (MQ=255)

                 cTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGata                                                                        <  1:4523108/93‑1 (MQ=255)

                  tttGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGatat                                                                       >  2:2926050/1‑93 (MQ=255)

                    tGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCt                                                                     <  2:5060477/93‑1 (MQ=255)

                     gggTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCtt                                                                    <  2:1481910/93‑1 (MQ=255)

                     gggTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCtt                                                                    >  2:1428929/1‑93 (MQ=255)

                      ggTAAACACAAAATACGGCCCCAGACGGGCACTGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAGCGGGTTTTTGATATCTTa                                                                   <  2:463345/93‑1 (MQ=255)

                      ggTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTa                                                                   <  2:2620005/93‑1 (MQ=255)

                      ggTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTa                                                                   <  1:6189388/93‑1 (MQ=255)

                        tAAACAAAAAATCCGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTCCACGGGATAACGGGTTTTTGATATCTTAAc                                                                 <  1:1919986/93‑1 (MQ=255)

                        tAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAAGGGGTTTTTGATATCTTagc                                                                 <  1:3574366/93‑3 (MQ=255)

                        tAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAAc                                                                 >  2:3232837/1‑93 (MQ=255)

                        tAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAAc                                                                 >  1:6294588/1‑93 (MQ=255)

                        tAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAAc                                                                 >  1:4746068/1‑93 (MQ=255)

                         aaaCAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAAcc                                                                >  2:5140566/1‑93 (MQ=255)

                         aaaCAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAAcc                                                                >  1:746874/1‑93 (MQ=255)

                          aaCAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCg                                                               >  1:100902/1‑93 (MQ=255)

                          aaCAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCg                                                               >  2:5973054/1‑93 (MQ=255)

                            cAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGAc                                                             <  1:133035/93‑1 (MQ=255)

                            cAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGAc                                                             <  1:3613764/93‑1 (MQ=255)

                             aaaaaaTACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGAcc                                                            >  2:5676946/1‑93 (MQ=255)

                              aaaaaTACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCt                                                           >  1:1747871/1‑93 (MQ=255)

                               aaaaTACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTc                                                          <  2:2581328/93‑1 (MQ=255)

                                aaaTACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCg                                                         <  1:5124722/93‑1 (MQ=255)

                                   tACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGcc                                                      >  2:3554682/1‑93 (MQ=255)

                                   tACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGcc                                                      >  1:2324108/1‑93 (MQ=255)

                                     cGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCtt                                                    >  1:4381052/1‑93 (MQ=255)

                                       gCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGa                                                  >  1:3860137/1‑93 (MQ=255)

                                       gCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGa                                                  <  2:2479287/93‑1 (MQ=255)

                                         cccAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATg                                                <  2:1221887/93‑1 (MQ=255)

                                         cccAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATg                                                >  2:5961187/1‑93 (MQ=255)

                                          ccAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATgg                                               >  2:5823569/1‑93 (MQ=255)

                                          ccAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATgg                                               <  1:4465917/93‑1 (MQ=255)

                                          ccAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATgg                                               <  2:475732/93‑1 (MQ=255)

                                           cAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGt                                              >  2:5407157/1‑93 (MQ=255)

                                            aGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTc                                             >  1:1782878/1‑93 (MQ=255)

                                            aGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTc                                             >  1:4244628/1‑93 (MQ=255)

                                             gAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCg                                            >  1:3013116/1‑93 (MQ=255)

                                             gAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCg                                            >  1:5870058/1‑93 (MQ=255)

                                              aaGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCgg                                           >  2:4857459/1‑93 (MQ=255)

                                               aGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCggg                                          <  2:4238160/93‑1 (MQ=255)

                                               aGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCggg                                          <  1:1659746/93‑1 (MQ=255)

                                                gggCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCgggg                                         <  2:1933179/93‑1 (MQ=255)

                                                gggCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCgggg                                         <  1:5830847/93‑1 (MQ=255)

                                                 ggCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCggggg                                        <  2:1721125/93‑1 (MQ=255)

                                                         cGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGt                                >  2:4369860/1‑93 (MQ=255)

                                                          gTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGtt                               <  1:4991468/93‑1 (MQ=255)

                                                            tCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTAt                             >  1:2961079/1‑93 (MQ=255)

                                                            tCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTAt                             >  2:3958837/1‑93 (MQ=255)

                                                             cACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATg                            <  1:1594584/93‑1 (MQ=255)

                                                             cACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATg                            >  1:5953499/1‑93 (MQ=255)

                                                               cTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGaa                          <  1:310466/93‑1 (MQ=255)

                                                               cTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGaa                          >  2:3308819/1‑93 (MQ=255)

                                                                 tAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAaca                        >  1:1185858/1‑93 (MQ=255)

                                                                 tAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAaca                        >  1:845602/1‑93 (MQ=255)

                                                                   agagGAGCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAAcacc                      <  2:350342/93‑1 (MQ=255)

                                                                    gaggagCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAAcgcca                     >  2:740224/1‑93 (MQ=255)

                                                                    gaggagCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAAcacca                     <  1:2425885/93‑1 (MQ=255)

                                                                    gaggagCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAAcacca                     >  2:692638/1‑93 (MQ=255)

                                                                     aggagCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAAcaccac                    <  1:5717480/93‑1 (MQ=255)

                                                                      ggagCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACt                   >  2:5493863/1‑93 (MQ=255)

                                                                      ggagCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACt                   <  2:1368685/93‑1 (MQ=255)

                                                                      ggagCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACt                   >  2:4071934/1‑93 (MQ=255)

                                                                       gagCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACtt                  <  2:4703198/93‑1 (MQ=255)

                                                                         gCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTcc                >  2:2795784/1‑93 (MQ=255)

                                                                         gCGGCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTcc                >  2:3014238/1‑93 (MQ=255)

                                                                            gCACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCaga             <  1:2287773/93‑1 (MQ=255)

                                                                             cACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCagag            >  2:458652/1‑93 (MQ=255)

                                                                             cACTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCagag            >  2:1789603/1‑93 (MQ=255)

                                                                              aCTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGc           >  1:2166860/1‑93 (MQ=255)

                                                                               cTATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCa          <  1:3849754/93‑1 (MQ=255)

                                                                                tATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCAc         >  2:6184319/1‑93 (MQ=255)

                                                                                tATGTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCAc         >  1:3337296/1‑93 (MQ=255)

                                                                                   gTTTCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCAcccc      <  1:5396375/93‑1 (MQ=255)

                                                                                      tCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGaa   <  2:3899050/93‑1 (MQ=255)

                                                                                      tCACGGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGaa   >  1:4020832/1‑93 (MQ=255)

                                                                                       cacgGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAg  >  1:2675707/1‑93 (MQ=255)

                                                                                       cacgGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAg  >  1:1824562/1‑93 (MQ=255)

                                                                                       cacgGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAg  >  2:5015292/1‑93 (MQ=255)

                                                                                       cacgGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAg  <  1:5606859/93‑1 (MQ=255)

GGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGAAG  >  NC_000913/1293589‑1293768

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`