BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,330,421	A→G	L450L (TTA→TTG)	topA →	DNA topoisomerase type I omega protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,330,421	0	A	G	100.0%	698.6 / NA	214	L450L (TTA→TTG)	topA	DNA topoisomerase type I omega protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (109/105); total (109/105)

Only 100 of 217 total aligned reads displayed.

CCGCCTGAAAGCACGCGGTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCAGCCCGTTTCAGTGAAG  >  NC_000913/1330331‑1330509

ccGCCTGAAAGCACGCGGTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGcc                                                                                        >  1:3969590/1‑93 (MQ=255)

 cGCCTGAAAGCACGCGGTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCca                                                                                       <  1:747450/93‑1 (MQ=255)

  gCCTGAAAGCACGCGGTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCcag                                                                                      >  2:1673882/1‑93 (MQ=255)

    cTGAAAGCACGCGGTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCcagca                                                                                    >  1:1160221/1‑93 (MQ=255)

    cTGAAAGCACGCGGTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCcagca                                                                                    >  1:1319631/1‑93 (MQ=255)

    cTGAAAGCACGCGGTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCcagca                                                                                    <  1:1548212/93‑1 (MQ=255)

     tGAAAGCACGCGGTCGTATTTTGCGTTTTGATGGCTGGACACAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCcagcag                                                                                   >  1:3391757/1‑93 (MQ=255)

     tGAAAGCACGCGGTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCcagcag                                                                                   >  1:1005373/1‑93 (MQ=255)

         aGCACGCGGTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTtaa                                                                               >  1:6233960/1‑93 (MQ=255)

         aGCACGCGGTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTtaa                                                                               <  2:3630380/93‑1 (MQ=255)

         aGCACGCGGTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTtaa                                                                               >  2:4785217/1‑93 (MQ=255)

          gCACGCGGTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTtaat                                                                              >  1:773703/1‑93 (MQ=255)

          gCACGCGGTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTtaat                                                                              <  1:5062160/93‑1 (MQ=255)

           cACGCGGTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTtaata                                                                             >  2:2086752/1‑93 (MQ=255)

           cACGCGGTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTtaata                                                                             <  1:2148467/93‑1 (MQ=255)

           cACGCGGTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTtaata                                                                             <  2:3829321/93‑1 (MQ=255)

            aCGCGGTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTtaaaaa                                                                            <  1:1021019/93‑1 (MQ=255)

              gcgGTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAg                                                                          >  2:652255/1‑93 (MQ=255)

              gcgGTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAg                                                                          <  1:3544344/93‑1 (MQ=255)

              gcgGTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAg                                                                          <  2:378657/93‑1 (MQ=255)

               cgGTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAgg                                                                         >  2:3923196/1‑93 (MQ=255)

                ggTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGc                                                                        >  2:1371065/1‑93 (MQ=255)

                 gTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCg                                                                       >  2:5040429/1‑93 (MQ=255)

                 gTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCg                                                                       >  1:4316469/1‑93 (MQ=255)

                 gTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCg                                                                       <  1:2476314/93‑1 (MQ=255)

                  tCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGa                                                                      >  1:5435867/1‑93 (MQ=255)

                  tCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGa                                                                      <  1:5401677/93‑1 (MQ=255)

                  tCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGa                                                                      >  1:6171428/1‑93 (MQ=255)

                   cGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGAt                                                                     <  2:2939147/93‑1 (MQ=255)

                     tATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGc                                                                   >  1:4704162/1‑93 (MQ=255)

                     tATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGc                                                                   >  1:1449173/1‑93 (MQ=255)

                       ttttGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGctc                                                                 >  2:1055297/1‑93 (MQ=255)

                       ttttGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGctc                                                                 <  2:4256546/93‑1 (MQ=255)

                          tGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGa                                                              <  2:2512515/93‑1 (MQ=255)

                           gCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGAc                                                             <  2:3203183/93‑1 (MQ=255)

                            cGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACg                                                            >  1:4357013/1‑93 (MQ=255)

                             gTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGc                                                           >  1:2638980/1‑93 (MQ=255)

                              ttttGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCt                                                          >  2:5063983/1‑93 (MQ=255)

                              ttttGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCt                                                          >  1:5678680/1‑93 (MQ=255)

                                 tGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGt                                                       <  1:1770948/93‑1 (MQ=255)

                                  gATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGtt                                                      >  2:3775806/1‑93 (MQ=255)

                                  gATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGtt                                                      <  2:5836321/93‑1 (MQ=255)

                                  gATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGtt                                                      <  1:3840188/93‑1 (MQ=255)

                                   aTGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTg                                                     <  2:3420883/93‑1 (MQ=255)

                                    tGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGa                                                    >  2:2241963/1‑93 (MQ=255)

                                    tGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGa                                                    >  2:2882590/1‑93 (MQ=255)

                                    tGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGa                                                    >  1:2978978/1‑93 (MQ=255)

                                     ggCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGaa                                                   >  2:5264249/1‑93 (MQ=255)

                                        tGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACtt                                                >  2:3663087/1‑93 (MQ=255)

                                         ggACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTa                                               <  1:3763584/93‑1 (MQ=255)

                                           aCAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTaca                                             >  1:3216749/1‑93 (MQ=255)

                                           aCAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGACGATGCTCTGACGCTCGTTGAACTTaca                                             >  1:4759485/1‑93 (MQ=255)

                                            cAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTacac                                            <  2:3502164/93‑1 (MQ=255)

                                            cAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTacac                                            <  2:3702907/93‑1 (MQ=255)

                                            cAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTacac                                            >  2:2178549/1‑93 (MQ=255)

                                             aaaaGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACAcc                                           <  1:5978322/93‑1 (MQ=255)

                                              aaaGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACAcca                                          >  1:2233992/1‑93 (MQ=255)

                                               aaGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACAccag                                         <  2:4716093/93‑1 (MQ=255)

                                               aaGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACAccag                                         >  2:79279/1‑93 (MQ=255)

                                               aaGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACAccag                                         <  1:1109720/93‑1 (MQ=255)

                                               aaGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACAccag                                         >  1:2545947/1‑93 (MQ=255)

                                               aaGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACAccag                                         >  1:4044732/1‑93 (MQ=255)

                                               aaGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACAccag                                         <  1:4899276/93‑1 (MQ=255)

                                                  tGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACAccagccc                                      <  1:3133371/93‑1 (MQ=255)

                                                   gATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACAccagccca                                     <  2:5735110/93‑1 (MQ=255)

                                                     tGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACAccagcccagc                                   <  2:5997559/93‑1 (MQ=255)

                                                     tGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACAccagcccagc                                   <  1:230723/93‑1 (MQ=255)

                                                      gCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCTCAACa                                  >  2:5547118/1‑93 (MQ=255)

                                                      gCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCa                                  <  2:730230/93‑1 (MQ=255)

                                                       ccTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCAc                                 >  2:1500864/1‑93 (MQ=255)

                                                       ccTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCAc                                 <  1:5415361/93‑1 (MQ=255)

                                                          gcgttgcgtAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACttt                              >  2:2976469/1‑93 (MQ=255)

                                                             ttgcgtAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTAcc                           <  1:5587326/93‑1 (MQ=255)

                                                             ttgcgtAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTAcc                           >  2:3058220/1‑93 (MQ=255)

                                                              tgcgtAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCa                          <  1:1878564/93‑1 (MQ=255)

                                                               gcgtAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCaa                         >  1:3358422/1‑93 (MQ=255)

                                                               gcgtAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCaa                         >  2:2384025/1‑93 (MQ=255)

                                                                cgtAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAg                        <  2:519231/93‑1 (MQ=255)

                                                                cgtAAAGGCGAAGAAGATCGCATCTTGCCAGCAGTTAATAAAGGAGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCaac                        >  1:2690577/1‑92 (MQ=255)

                                                                 gtAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAgc                       >  2:1826511/1‑93 (MQ=255)

                                                                 gtAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAgc                       <  1:1176029/93‑1 (MQ=255)

                                                                 gtAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAgc                       <  1:4504357/93‑1 (MQ=255)

                                                                  tAAAGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAgcc                      >  2:1465388/1‑93 (MQ=255)

                                                                    aaGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAgccgc                    >  1:5276482/1‑93 (MQ=255)

                                                                     aGGCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAgccgcc                   <  1:5837538/93‑1 (MQ=255)

                                                                      ggCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCa                  <  1:482940/93‑1 (MQ=255)

                                                                       gCGATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCAg                 <  2:4923114/93‑1 (MQ=255)

                                                                         gATGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCAGcc               <  2:3336888/93‑1 (MQ=255)

                                                                          aTGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCAGccc              >  2:3319985/1‑93 (MQ=255)

                                                                          aTGAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCAGccc              >  2:3586668/1‑93 (MQ=255)

                                                                            gAAGATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCAGCCCGt            >  1:4109934/1‑93 (MQ=255)

                                                                               gATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCAGCCCGTTTc         >  1:3361091/1‑93 (MQ=255)

                                                                               gATCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCAGCCCGTTTc         <  1:5598231/93‑1 (MQ=255)

                                                                                aTCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCAGCCCGTTTCa        >  2:4361152/1‑93 (MQ=255)

                                                                                aTCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCAGCCCGTTTCa        >  1:572557/1‑93 (MQ=255)

                                                                                 tCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACCCCAGCCCAGCACTTTACCAAGCCGCCAGCCCGTTTCAg       <  1:2842681/93‑1 (MQ=255)

                                                                                 tCGCATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCAGCCCGTTTCAg       >  2:2776285/1‑93 (MQ=255)

                                                                                    cATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCAGCCCGTTTCAGTGa    <  1:635340/93‑1 (MQ=255)

                                                                                    cATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCAGCCCGTTTCAGTGa    <  2:1176135/93‑1 (MQ=255)

                                                                                    cATCTTGCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCAGCCCGTTTCAGTGa    <  2:2209403/93‑1 (MQ=255)

CCGCCTGAAAGCACGCGGTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCAGCCCGTTTCAGTGAAG  >  NC_000913/1330331‑1330509

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`