BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,343,823	C→T	G315E (GGG→GAG)	yciR ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,343,823	0	C	T	100.0%	716.0 / NA	193	G315E (GGG→GAG)	yciR	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (95/98); total (95/98)

Only 100 of 198 total aligned reads displayed.

AAGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCCCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACACGTCGCGTAATAACTGGTCACCAAACAAATGC  >  NC_000913/1343733‑1343912

aaGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCa                                                                                         >  2:1645978/1‑93 (MQ=255)

   gggAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCt                                                                                      <  2:4132029/93‑1 (MQ=255)

   gggAGCCGTAAGCGGGTCAAAATTCGTAATGCCATTGCTTCCAGCGCGCTTTGTGAGGGGTTGGATGCCAGTACCAGAAACTCATCCTCACCt                                                                                      >  1:811736/1‑93 (MQ=255)

      aGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGa                                                                                   <  1:3566062/93‑1 (MQ=255)

        ccGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGAcg                                                                                 <  1:4956971/93‑1 (MQ=255)

        ccGTAAGCGGGTCAAAATTCGTGATGCCATTGCCTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATGCTCACCTGGAcg                                                                                 >  2:2070102/1‑93 (MQ=255)

         cGTAAGGGGGTCAAAATTCGGGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGAcgc                                                                                <  1:4700710/93‑1 (MQ=255)

           tAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACgcgc                                                                              >  2:3870573/1‑93 (MQ=255)

           tAAGCAGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACgcgc                                                                              >  2:4105786/1‑93 (MQ=255)

            aaGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGcc                                                                             <  2:6087278/93‑1 (MQ=255)

              gCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCaa                                                                           >  1:5243686/1‑93 (MQ=255)

              gCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCaa                                                                           <  2:4592751/93‑1 (MQ=255)

              gCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCaa                                                                           <  2:4744042/93‑1 (MQ=255)

              gCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCaa                                                                           >  1:3740674/1‑93 (MQ=255)

              gCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCaa                                                                           >  2:3937210/1‑93 (MQ=255)

              gCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCaa                                                                           >  1:5542145/1‑93 (MQ=255)

               cGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAac                                                                          >  2:2583193/1‑93 (MQ=255)

               cGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGAACCAGAAACTCATCCTCACCTGGACGCGCCAac                                                                          >  1:639499/1‑93 (MQ=255)

               cGGGTCAAAATTCGTGATGCCATTGCTTCCAGAGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAac                                                                          <  2:3788767/93‑1 (MQ=255)

                gggTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAaca                                                                         >  1:530892/1‑93 (MQ=255)

                gggTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAaca                                                                         >  1:5566006/1‑93 (MQ=255)

                gggTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAaca                                                                         >  1:5429245/1‑93 (MQ=255)

                 ggTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAacac                                                                        <  1:221968/93‑1 (MQ=255)

                  gTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACAcc                                                                       <  2:5989430/93‑1 (MQ=255)

                  gTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACAcc                                                                       >  1:2852339/1‑93 (MQ=255)

                   tCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCt                                                                      >  1:3339177/1‑93 (MQ=255)

                     aaaaTTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTgg                                                                    >  1:2647848/1‑93 (MQ=255)

                       aaTTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTc                                                                  >  1:3898406/1‑93 (MQ=255)

                       aaTTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTc                                                                  <  2:4930271/93‑1 (MQ=255)

                        aTTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCa                                                                 >  2:1117641/1‑93 (MQ=255)

                         ttCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCAt                                                                <  1:1205384/93‑1 (MQ=255)

                            gTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGtt                                                             <  1:3601331/93‑1 (MQ=255)

                            gTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGtt                                                             <  2:3470142/93‑1 (MQ=255)

                              gATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCg                                                           <  1:2499152/93‑1 (MQ=255)

                                tGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCgag                                                         >  2:2455876/1‑93 (MQ=255)

                                tGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCgag                                                         >  2:2643558/1‑93 (MQ=255)

                                tGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCgag                                                         >  1:1516830/1‑93 (MQ=255)

                                  ccATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGAc                                                       <  2:4240369/93‑1 (MQ=255)

                                  ccATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGAc                                                       <  2:90276/93‑1 (MQ=255)

                                   cATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACa                                                      <  2:617437/93‑1 (MQ=255)

                                     ttGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCCCCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGc                                                    <  1:3515265/93‑1 (MQ=255)

                                         ttCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTaa                                                >  2:940281/1‑93 (MQ=255)

                                           ccAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTaaaa                                              >  2:1385076/1‑93 (MQ=255)

                                            cAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAAt                                             >  2:576571/1‑93 (MQ=255)

                                            cAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAAt                                             <  1:715521/93‑1 (MQ=255)

                                             aGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATa                                            >  2:175340/1‑93 (MQ=255)

                                             aGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATa                                            <  1:4422392/93‑1 (MQ=255)

                                             aGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATa                                            <  1:1957073/93‑1 (MQ=255)

                                              gcgcgcTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAg                                           <  1:4997174/93‑1 (MQ=255)

                                              gcgcgcTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAg                                           >  2:5453564/1‑93 (MQ=255)

                                                gcgcTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGcc                                         >  2:4001075/1‑93 (MQ=255)

                                                 cgcTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCa                                        >  2:4178513/1‑93 (MQ=255)

                                                 cgcTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCa                                        >  2:2034335/1‑93 (MQ=255)

                                                  gcTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCaa                                       >  1:297062/1‑93 (MQ=255)

                                                   cTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAAt                                      <  2:3655129/93‑1 (MQ=255)

                                                   cTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAAt                                      <  2:2218966/93‑1 (MQ=255)

                                                   cTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAAt                                      <  1:5794922/93‑1 (MQ=255)

                                                   cTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAAt                                      <  1:1391789/93‑1 (MQ=255)

                                                    tttGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATg                                     >  2:280120/1‑93 (MQ=255)

                                                      tgtgAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGac                                   <  1:4766644/93‑1 (MQ=255)

                                                      tgtgAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGac                                   >  2:5548529/1‑93 (MQ=255)

                                                       gtgAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGacg                                  <  1:6159376/93‑2 (MQ=255)

                                                       gtgAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGacg                                  >  1:5986931/1‑92 (MQ=255)

                                                        tgAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGacgc                                 >  1:1106388/1‑91 (MQ=255)

                                                        tgAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGacgc                                 <  1:1896226/93‑3 (MQ=255)

                                                         gAGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGAcgcg                                >  1:2397371/1‑93 (MQ=255)

                                                          aGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGt                               <  2:4041288/93‑1 (MQ=255)

                                                          aGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGt                               <  1:5212087/93‑1 (MQ=255)

                                                           ggTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTc                              >  2:1240590/1‑93 (MQ=255)

                                                                  gATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGtaat                       <  1:4148976/93‑1 (MQ=255)

                                                                   aTGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGtaata                      <  1:3867958/93‑1 (MQ=255)

                                                                    tGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGtaataa                     <  1:1088045/93‑1 (MQ=255)

                                                                     gCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAAc                    <  1:4499515/93‑1 (MQ=255)

                                                                      ccAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACt                   <  2:1853746/93‑1 (MQ=255)

                                                                      ccAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACt                   >  1:3823720/1‑93 (MQ=255)

                                                                       cAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTg                  >  1:3017307/1‑93 (MQ=255)

                                                                       cAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTg                  >  2:5060590/1‑93 (MQ=255)

                                                                        aGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTgg                 >  1:1282924/1‑93 (MQ=255)

                                                                         gTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGt                >  2:4301767/1‑93 (MQ=255)

                                                                          tACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTc               >  2:5896749/1‑93 (MQ=255)

                                                                               gAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaa          >  1:1650230/1‑93 (MQ=255)

                                                                               gAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaa          >  1:1123336/1‑93 (MQ=255)

                                                                                aaaCTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaa         <  1:3046703/93‑1 (MQ=255)

                                                                                 aaCTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaac        >  2:3015694/1‑93 (MQ=255)

                                                                                  aCTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaaca       <  2:5840733/93‑1 (MQ=255)

                                                                                  aCTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaaca       <  2:6290203/93‑1 (MQ=255)

                                                                                   cTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaacaa      <  2:80233/93‑1 (MQ=255)

                                                                                    tCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaacaaa     >  2:3622314/1‑93 (MQ=255)

                                                                                    tCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaacaaa     >  2:5829798/1‑93 (MQ=255)

                                                                                    tCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaacaaa     <  1:5336364/93‑1 (MQ=255)

                                                                                    tCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaacaaa     <  1:4711939/93‑1 (MQ=255)

                                                                                    tCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaacaaa     <  1:792126/93‑1 (MQ=255)

                                                                                    ccATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaacaaa     <  2:6233804/92‑1 (MQ=255)

                                                                                     cATCCTCACCTGGACGCTCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAAt    <  2:5639462/93‑1 (MQ=255)

                                                                                     cATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGGCAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAAt    <  1:4088387/93‑1 (MQ=255)

                                                                                     cATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAAt    <  2:3232134/93‑1 (MQ=255)

                                                                                     cATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAAt    <  2:3514908/93‑1 (MQ=255)

                                                                                      aTCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATg   <  1:4623250/93‑1 (MQ=255)

                                                                                      aTCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATg   <  1:5838575/93‑1 (MQ=255)

                                                                                       tCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGc  >  1:4004577/1‑93 (MQ=255)

AAGGGGAGCCGTAAGCGGGTCAAAATTCGTGATGCCATTGCTTCCAGCGCGCTTTGTGAGGTGTTGGATGCCAGTACCAGAAACTCATCCCCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACACGTCGCGTAATAACTGGTCACCAAACAAATGC  >  NC_000913/1343733‑1343912

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`