BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,343,880	A→G	V296A (GTG→GCG)	yciR ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,343,880	0	A	G	100.0%	686.6 / NA	214	V296A (GTG→GCG)	yciR	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (92/122); total (92/122)

Only 100 of 219 total aligned reads displayed.

GAGGTGTTGGATGCCAGTACCAGAAACTCATCCCCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACACGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCAAATCAAGATACACAACCCCAACT  >  NC_000913/1343790‑1343969

 aGGTGTTGGATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGt                                                                                          >  2:4652098/1‑93 (MQ=255)

         gATGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGtaat                                                                                  <  1:813688/93‑1 (MQ=255)

          aTGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGtaata                                                                                 <  1:5197113/93‑1 (MQ=255)

          aTGCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGtaata                                                                                 <  1:3867958/93‑1 (MQ=255)

            tccAGTACCAGAAACTCATCCGCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTTATAAc                                                                               <  2:3992090/92‑1 (MQ=255)

            gCCAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAAc                                                                               <  2:2104562/93‑1 (MQ=255)

             ccAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACt                                                                              >  1:3823720/1‑93 (MQ=255)

             ccAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACt                                                                              <  1:3481108/93‑1 (MQ=255)

              cAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTg                                                                             <  1:4353957/93‑1 (MQ=255)

              cAGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTg                                                                             >  1:3017307/1‑93 (MQ=255)

               aGTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTgg                                                                            >  1:1282924/1‑93 (MQ=255)

                gTACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGt                                                                           >  2:4301767/1‑93 (MQ=255)

                 tACCAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTc                                                                          <  2:4758469/93‑1 (MQ=255)

                   ccAGAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCAc                                                                        >  2:378856/1‑93 (MQ=255)

                      gAAACTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaa                                                                     >  1:1123336/1‑93 (MQ=255)

                       aaaCTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaa                                                                    <  1:3046703/93‑1 (MQ=255)

                       aaaCTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaa                                                                    <  2:5583597/93‑1 (MQ=255)

                       aaaCTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCAAATGACGCGTCGCGTAATAACTAGTCACcaaa                                                                    >  1:264946/1‑93 (MQ=255)

                        aaCTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaac                                                                   >  2:3015694/1‑93 (MQ=255)

                         aCTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaaca                                                                  <  2:5840733/93‑1 (MQ=255)

                          cTCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaacaa                                                                 <  2:80233/93‑1 (MQ=255)

                           tCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaacaaa                                                                <  1:5336364/93‑1 (MQ=255)

                           tCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaacaaa                                                                <  1:792126/93‑1 (MQ=255)

                           tCATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaacaaa                                                                <  2:5035110/93‑1 (MQ=255)

                           ccATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACcaaacaaa                                                                <  2:6233804/92‑1 (MQ=255)

                            cATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAAt                                                               <  2:3232134/93‑1 (MQ=255)

                            cATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAAt                                                               >  2:3506454/1‑93 (MQ=255)

                            cATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAAt                                                               <  2:173748/93‑1 (MQ=255)

                            cATCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAAt                                                               <  1:4107509/93‑1 (MQ=255)

                             aTCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATg                                                              <  1:5838575/93‑1 (MQ=255)

                             aTCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATg                                                              <  1:4623250/93‑1 (MQ=255)

                              tCCTCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGc                                                             >  2:3621446/1‑93 (MQ=255)

                               cctcACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGcc                                                            <  1:960832/90‑1 (MQ=255)

                                ctcACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGccc                                                           >  1:1017862/3‑93 (MQ=255)

                                 tcACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCa                                                          >  1:4077169/2‑93 (MQ=255)

                                   aCCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATa                                                        <  2:138905/93‑1 (MQ=255)

                                   aCCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATa                                                        <  2:447930/93‑1 (MQ=255)

                                    ccTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCTAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAg                                                       >  1:5583379/1‑93 (MQ=255)

                                    ccTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAg                                                       >  1:5134179/1‑93 (MQ=255)

                                     cTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAgg                                                      <  2:5449444/93‑1 (MQ=255)

                                      tGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGc                                                     <  2:5975770/93‑1 (MQ=255)

                                      tGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGc                                                     >  2:483195/1‑93 (MQ=255)

                                      tGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGc                                                     >  2:2505366/1‑93 (MQ=255)

                                        gACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGcgt                                                   >  1:1801457/1‑93 (MQ=255)

                                         aCGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGcgtc                                                  <  1:471913/93‑1 (MQ=255)

                                         aCGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGcgtc                                                  <  1:3295492/93‑1 (MQ=255)

                                         aCGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGcgtc                                                  >  2:2819971/1‑93 (MQ=255)

                                            cgcCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGtt                                               <  1:1257013/93‑1 (MQ=255)

                                             gcCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTg                                              <  1:320894/93‑1 (MQ=255)

                                             gcCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTg                                              <  2:2327605/93‑1 (MQ=255)

                                                aaCACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGAcc                                           <  1:3265508/93‑1 (MQ=255)

                                                aaCACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGAcc                                           >  2:4985624/1‑93 (MQ=255)

                                                aaCACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGAcc                                           <  1:2297992/93‑1 (MQ=255)

                                                 actccTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCt                                          <  2:2604103/90‑1 (MQ=255)

                                                 acacCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCt                                          <  2:6094980/93‑1 (MQ=255)

                                                   acCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCttt                                        >  2:4384351/1‑93 (MQ=255)

                                                   acCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCttt                                        >  1:3999902/1‑93 (MQ=255)

                                                    ccTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCtttt                                       >  2:1518051/1‑93 (MQ=255)

                                                      tGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTg                                     <  2:1412712/93‑1 (MQ=255)

                                                      tGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTg                                     <  1:1987579/93‑1 (MQ=255)

                                                          cATGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAAt                               >  2:1208145/1‑93 (MQ=255)

                                                           aTGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAAtt                              >  2:4912270/1‑93 (MQ=255)

                                                           aTGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAAtt                              <  1:5598425/93‑1 (MQ=255)

                                                           aTGTTCGAGACAGCTTAAAATAGCCAAGGACGCGTCGCGTAAGTACTGGGCACCAAACAAATGCCCATAGGCGGCGTTGACCTTTTGG‑‑AAAta                              >  1:6308988/1‑92 (MQ=255)

                                                            tGTTCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTa                             >  1:2360720/1‑93 (MQ=255)

                                                               tCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATcc                          <  1:4348877/93‑1 (MQ=255)

                                                               tCGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATcc                          <  2:6175390/93‑1 (MQ=255)

                                                                cGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCa                         <  2:5754665/93‑1 (MQ=255)

                                                                cGAGACAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCa                         <  1:1363583/93‑1 (MQ=255)

                                                                 gagaCAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCaa                        >  2:2000565/1‑93 (MQ=255)

                                                                  agaCAGCTTAAAATAGCCAATGACGCGTCGTTTAATAGCTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCaaa                       <  1:2070102/93‑1 (MQ=255)

                                                                  agaCAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCaaa                       <  2:510022/93‑1 (MQ=255)

                                                                   gaCAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCAAAt                      <  2:664921/93‑1 (MQ=255)

                                                                   gaCAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCAAAt                      <  1:2761119/93‑1 (MQ=255)

                                                                   gaCAGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCAAAt                      >  1:5371738/1‑93 (MQ=255)

                                                                      aGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCAAATCaa                   <  1:298604/93‑1 (MQ=255)

                                                                      aGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCAAATCaa                   >  2:3872092/1‑93 (MQ=255)

                                                                      aGCTTAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCAAATCaa                   <  1:3727488/93‑1 (MQ=255)

                                                                         ttAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACTAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCAAATCAAGAt                >  1:567035/1‑93 (MQ=255)

                                                                         ttAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCAAATCAAGAt                >  2:4862916/1‑93 (MQ=255)

                                                                         ttAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCAAATCAAGAt                <  1:495772/93‑1 (MQ=255)

                                                                          tAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCAAATCAAGATa               >  2:4462539/1‑93 (MQ=255)

                                                                          tAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCAAATCAAGATa               <  1:5222445/93‑1 (MQ=255)

                                                                          tAAAATAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCAAATCAAGATa               <  2:5688900/93‑1 (MQ=255)

                                                                           aaaaTAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCAAATCAAGATac              >  1:3165160/1‑93 (MQ=255)

                                                                           aaaaTAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCAAATCAAGATac              >  2:2963594/1‑93 (MQ=255)

                                                                            aaaTAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCAAATCAAGATaca             >  1:2805367/1‑93 (MQ=255)

                                                                            aaaTAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCAAATCAAGATaca             <  2:5273422/93‑1 (MQ=255)

                                                                            aaaTAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCAAATCAAGATaca             <  1:5723479/93‑1 (MQ=255)

                                                                            aaaTAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCAAATCAAGATaca             <  1:1740176/93‑1 (MQ=255)

                                                                              aTAGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCAAATCAAGATAcaca           <  1:164150/93‑1 (MQ=255)

                                                                                aGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCAAATCAAGATACACAAc         >  2:5780494/1‑93 (MQ=255)

                                                                                aGCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCAAATCAAGATACACAAc         >  1:4595576/1‑93 (MQ=255)

                                                                                 gCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCAAATCAAGATACACAAcc        >  2:1811247/1‑93 (MQ=255)

                                                                                 gCCAATGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCAAATCAAGATACACAAcc        >  2:3246604/1‑93 (MQ=255)

                                                                                    aaTGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCAAATCAAGATACACAACCCCa     >  2:514628/1‑93 (MQ=255)

                                                                                     aTGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCAAATCAAGATACACAACCCCaa    >  1:5458283/1‑93 (MQ=255)

                                                                                      tGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTGAAAAATTATCCAAATCAAGATACACAACCCCa     >  1:2057050/1‑93 (MQ=255)

                                                                                      tGACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCAAATCAAGATACACAACCCCAAc   <  1:4554809/93‑1 (MQ=255)

                                                                                       gACGCGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCAAATCAAGATACACAACCCCAACt  >  2:2412435/1‑93 (MQ=255)

GAGGTGTTGGATGCCAGTACCAGAAACTCATCCCCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAATAGCCAATGACACGTCGCGTAATAACTGGTCACCAAACAAATGCCCATAGGCGTCGTTGACCTTTTTG‑‑AAATTATCCAAATCAAGATACACAACCCCAACT  >  NC_000913/1343790‑1343969

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`