Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,356,924 C→T P96P (CCG→CCA ycjJ ← putative amino acid/amine transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,356,9240CT99.5% 746.7 / ‑6.5 207P96P (CCG→CCAycjJputative amino acid/amine transport protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base T (121/85);  minor base G (1/0);  total (122/85)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 215 total aligned reads displayed.

GGAGAGATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGCGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACAG  >  NC_000913/1356834‑1357013
                                                                                          |                                                                                         
ggAGAGATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTgg                                                                                         >  2:3332539/1‑93 (MQ=255)
 gagagaTAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTggg                                                                                        <  1:3040998/93‑1 (MQ=255)
  agagaTAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGt                                                                                       >  1:470670/1‑93 (MQ=255)
   gagaTAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGtt                                                                                      <  2:4442619/93‑1 (MQ=255)
   gagaTAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGtt                                                                                      <  1:625561/93‑1 (MQ=255)
     gatagatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTaa                                                                                    <  1:4940726/93‑1 (MQ=255)
     gatagatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTaa                                                                                    >  1:5601254/1‑93 (MQ=255)
     gatagatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTaa                                                                                    >  2:2376028/1‑93 (MQ=255)
     gatagatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTaa                                                                                    >  1:1607358/1‑93 (MQ=255)
      atagatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAAt                                                                                   <  2:4819871/93‑1 (MQ=255)
       tagatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATc                                                                                  <  1:1783281/93‑1 (MQ=255)
        agatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCg                                                                                 <  1:2747849/93‑1 (MQ=255)
          atTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGAc                                                                               >  2:3450071/1‑93 (MQ=255)
           ttttCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACt                                                                              >  2:1584878/1‑93 (MQ=255)
           ttttCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACt                                                                              >  1:2912434/1‑93 (MQ=255)
           ttttCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACt                                                                              >  2:1170911/1‑93 (MQ=255)
            tttCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACtt                                                                             <  1:4310584/93‑1 (MQ=255)
              tCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACtttt                                                                           >  1:4461525/1‑93 (MQ=255)
              tCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACtttt                                                                           <  1:3427767/93‑1 (MQ=255)
                gCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTgc                                                                         >  1:3481644/1‑93 (MQ=255)
                   aacaaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGcgcg                                                                      >  2:1103091/1‑93 (MQ=255)
                     caaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTa                                                                    <  2:4986726/93‑1 (MQ=255)
                     caaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTa                                                                    >  1:5236298/1‑93 (MQ=255)
                     caaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTa                                                                    <  1:930846/93‑1 (MQ=255)
                     caaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTa                                                                    >  1:2809738/1‑93 (MQ=255)
                     caaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTa                                                                    <  1:2005741/93‑1 (MQ=255)
                     caaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTa                                                                    <  1:3092021/93‑1 (MQ=255)
                     aaaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTa                                                                    <  2:1939123/92‑1 (MQ=255)
                      aaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAg                                                                   >  2:762870/1‑93 (MQ=255)
                       aGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAgg                                                                  <  1:3856622/93‑1 (MQ=255)
                       aGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAgg                                                                  >  1:1844857/1‑93 (MQ=255)
                         aCGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGta                                                                >  2:513770/1‑93 (MQ=255)
                          cGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGtat                                                               >  2:2129561/1‑93 (MQ=255)
                           gTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGtata                                                              >  2:200589/1‑93 (MQ=255)
                           gTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGtata                                                              <  2:1993330/93‑1 (MQ=255)
                           gTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGtata                                                              >  2:2614312/1‑93 (MQ=255)
                            ttAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAg                                                             >  1:577278/1‑93 (MQ=255)
                              aaTCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGc                                                           <  1:387680/93‑1 (MQ=255)
                               atcatcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGcc                                                          <  2:5085599/93‑1 (MQ=255)
                                tcatcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCg                                                         <  2:5112667/93‑1 (MQ=255)
                                 catcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGa                                                        >  2:4043268/1‑93 (MQ=255)
                                  atcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGaa                                                       >  2:4883385/1‑93 (MQ=255)
                                   tcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATCAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAAc                                                      >  1:1588022/1‑93 (MQ=255)
                                   tcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAAc                                                      >  2:5374866/1‑93 (MQ=255)
                                       cAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGc                                                  <  2:648027/93‑1 (MQ=255)
                                        aaaaaGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGcc                                                 <  2:1002397/93‑1 (MQ=255)
                                         aaaaGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCt                                                >  2:2661072/1‑93 (MQ=255)
                                         aaaaGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCt                                                >  2:4231467/1‑93 (MQ=255)
                                          aaaGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTc                                               <  2:3249563/93‑1 (MQ=255)
                                          aaaGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTc                                               >  2:4636282/1‑93 (MQ=255)
                                           aaGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTcc                                              <  1:2123097/93‑1 (MQ=255)
                                            agagATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCg                                             >  1:3103658/1‑93 (MQ=255)
                                             gagaTAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCgg                                            >  1:4578346/1‑93 (MQ=255)
                                             gagaTAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCgg                                            >  2:1729852/1‑93 (MQ=255)
                                              agaTAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGa                                           <  2:1691074/93‑1 (MQ=255)
                                               gaTAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGaa                                          >  1:1023961/1‑93 (MQ=255)
                                                aTAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGaaa                                         <  1:1114815/93‑1 (MQ=255)
                                                aTAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGaaa                                         <  1:3669930/93‑1 (MQ=255)
                                                 tAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAAc                                        >  1:1203296/1‑93 (MQ=255)
                                                 tAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAAc                                        <  2:5899875/93‑1 (MQ=255)
                                                 tAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAAc                                        >  2:4509683/1‑93 (MQ=255)
                                                  aaTCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACt                                       >  1:147593/1‑93 (MQ=255)
                                                   aTCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTg                                      >  2:3086214/1‑93 (MQ=255)
                                                    tCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTgg                                     >  1:3182657/1‑93 (MQ=255)
                                                       agcagcGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGACGAACCGGCCTCCGGAAACTGGCGa                                  >  1:716432/1‑93 (MQ=255)
                                                        gcagcGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGaa                                 >  1:5682358/1‑93 (MQ=255)
                                                        gcagcGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGaa                                 >  1:3255762/1‑93 (MQ=255)
                                                        acagcGAGGACCACCCCACAATAAAACCGACGTGTGGTTAAATCGACTTTCGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGaa                                 <  2:3913137/92‑1 (MQ=255)
                                                          agcGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAAcc                               >  1:601648/1‑93 (MQ=255)
                                                          agcGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAAcc                               <  1:5708769/93‑1 (MQ=255)
                                                           gcGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCa                              >  1:3836783/1‑93 (MQ=255)
                                                           gcGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCa                              >  1:2261197/1‑93 (MQ=255)
                                                           gcGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCa                              >  1:2576194/1‑93 (MQ=255)
                                                           gcGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCa                              >  2:2286163/1‑93 (MQ=255)
                                                           gcGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCa                              >  2:1965352/1‑93 (MQ=255)
                                                            cGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAg                             >  1:4901230/1‑93 (MQ=255)
                                                              aTGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGtt                           >  1:4055819/1‑93 (MQ=255)
                                                               tGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGttt                          >  1:1437547/1‑93 (MQ=255)
                                                               tGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGttt                          >  1:2646596/1‑93 (MQ=255)
                                                                gACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTg                         >  2:4058562/1‑93 (MQ=255)
                                                                 aCCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGc                        <  2:2236358/93‑1 (MQ=255)
                                                                  ccAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGcc                       <  2:12389/93‑1 (MQ=255)
                                                                    aGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGt                     <  2:683130/93‑1 (MQ=255)
                                                                     gCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTa                    <  1:6133673/93‑1 (MQ=255)
                                                                        gACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCt                 <  2:5457298/93‑1 (MQ=255)
                                                                         aCCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTg                >  2:625298/1‑93 (MQ=255)
                                                                         aCCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTg                >  1:5875827/1‑93 (MQ=255)
                                                                          ccATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGa               <  1:5490429/93‑1 (MQ=255)
                                                                          ccATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGa               >  1:3982057/1‑93 (MQ=255)
                                                                          ccACAAATCCGACGTGTGGATTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGa               <  2:855006/93‑1 (MQ=255)
                                                                           cATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGAt              <  2:4775057/93‑1 (MQ=255)
                                                                             tAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAg            >  1:2879072/1‑93 (MQ=255)
                                                                                 tCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGt        >  1:5657384/1‑93 (MQ=255)
                                                                                 tCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGt        <  1:4803476/93‑1 (MQ=255)
                                                                                   cGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCATCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTaa      <  1:2349499/93‑1 (MQ=255)
                                                                                    gACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTaaa     >  2:3808382/1‑93 (MQ=255)
                                                                                     aCGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAAc    <  2:2995444/93‑1 (MQ=255)
                                                                                      cGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACa   <  2:4369584/93‑1 (MQ=255)
                                                                                      cGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACa   <  2:3581405/93‑1 (MQ=255)
                                                                                       gtgtGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACAg  >  1:1626676/1‑93 (MQ=255)
                                                                                          |                                                                                         
GGAGAGATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGCGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACAG  >  NC_000913/1356834‑1357013

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: