BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,358,926	T→C	T3A (ACC→GCC)	b1297 ←	putative glutamine synthetase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,358,926	0	T	C	100.0%	726.9 / NA	220	T3A (ACC→GCC)	b1297	putative glutamine synthetase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (142/78); total (142/78)

Only 100 of 225 total aligned reads displayed.

GCTCCAGGTAGCGTTTCACTTCCTGCGTAAAGGCGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGTTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATGCAAACTAA  >  NC_000913/1358836‑1359015

gcTCCAGGTAGCGTTTCACTTCCTGCGTAAAGGCGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGctt                                                                                         >  1:1573387/1‑93 (MQ=255)

 cTCCAGGTAGCGTTTCACTTCCTGCGTAAAGGCGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTCGCTTc                                                                                        >  1:123168/1‑93 (MQ=255)

  tCCAGGTAGCGTTTCACTTCCTGCGTAAAGGCGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTcc                                                                                       >  2:5060669/1‑93 (MQ=255)

   ccAGGTAGCGTTTCACTTCCTGCGTAAAGGCGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCa                                                                                      >  1:3517071/1‑93 (MQ=255)

      ggTAGCGTTTCACTTCCTGCGTAAAGGCGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGa                                                                                   >  2:643222/1‑93 (MQ=255)

      ggTAGCGTTTCACTTCCTGCGTAAAGGCGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGa                                                                                   >  2:5802861/1‑93 (MQ=255)

      ggTAGCGTTTCACTTCCTGCGTAAAGGCGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGa                                                                                   >  1:2064456/1‑93 (MQ=255)

         aGCGTTTCACTTCCTGCGTAAAGGCGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGAttc                                                                                >  1:626585/1‑93 (MQ=255)

          gCGTTTCACTTCCTGCGTAAAGGCGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGAttct                                                                               >  1:1152575/1‑93 (MQ=255)

            gTTTCACTTCCTGCGTAAAGGCGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGAttcttc                                                                             >  2:749088/1‑93 (MQ=255)

             tttCACTTCCTGCGTAAAGGCGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTTCATGATTCTTCg                                                                            >  2:2121746/1‑93 (MQ=255)

             tttCACTTCCTGCGTAAAGGCGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCg                                                                            >  2:1397945/1‑93 (MQ=255)

              ttCTCTCCCTGCGTAAGGGCCCTCCCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGc                                                                           <  1:6112168/93‑1 (MQ=255)

               tCACTTCCTGCGTAAAGGCGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGcc                                                                          >  2:4669684/1‑93 (MQ=255)

                cccTTCCTGCGAAAGGCCCCCCCCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCt                                                                         <  2:2791214/91‑1 (MQ=255)

                 ccTTCCTGGAAAAAGGCCCTCCCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCtt                                                                        <  2:483323/92‑1 (MQ=255)

                   ttCCTGCGTAAAGGCGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTg                                                                      >  2:5371914/1‑93 (MQ=255)

                   ttCCTGCGTAAAGGCGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTg                                                                      >  2:1575639/1‑93 (MQ=255)

                   ttCCTGCGTAAAGGCGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTg                                                                      >  1:516044/1‑93 (MQ=255)

                     ccTGCGTAAAGGCGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGgt                                                                    >  2:1234180/1‑93 (MQ=255)

                       tGCGTAAAGGCGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGgttt                                                                  >  1:1593693/1‑93 (MQ=255)

                       cgCGTAAAGGCGCTACCTCGCCTCTCTTCTGAGTGCTGAACAAAGTTCTCTACCTCAACGATATTGGCTTGCATGATTCTTCGCCTTTGgttt                                                                  >  2:3070824/2‑93 (MQ=255)

                           tAAAGGCGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGgtttgttt                                                              >  1:650785/1‑93 (MQ=255)

                             aaGGCGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTc                                                            >  2:2269477/1‑93 (MQ=255)

                             aaGGCGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTc                                                            >  2:4087406/1‑93 (MQ=255)

                               ggCGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCg                                                          >  2:4542848/1‑93 (MQ=255)

                                gcgcTCCCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGc                                                         <  2:1734607/93‑1 (MQ=255)

                                    tACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGt                                                     >  1:5634839/1‑93 (MQ=255)

                                    tACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGt                                                     >  2:5194348/1‑93 (MQ=255)

                                       cccGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTAt                                                  <  1:2507583/93‑1 (MQ=255)

                                        ccGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATc                                                 >  1:3877834/1‑93 (MQ=255)

                                         cGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCa                                                <  2:1900765/93‑1 (MQ=255)

                                          gCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCaa                                               >  2:4210403/1‑93 (MQ=255)

                                          gCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCaa                                               <  1:2766847/93‑1 (MQ=255)

                                          gCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCaa                                               <  2:852490/93‑1 (MQ=255)

                                           ccTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCaaa                                              <  1:57018/93‑1 (MQ=255)

                                            ctctctTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAg                                             <  2:1128451/93‑1 (MQ=255)

                                            ctctctTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGAATCTTCGCCTTTGGTTTGTTTTTCGCTCGTTATCAAAg                                             >  1:3346742/1‑93 (MQ=255)

                                             tctctTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGc                                            >  2:957114/1‑93 (MQ=255)

                                             tctctTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGc                                            >  1:4243148/1‑93 (MQ=255)

                                             tctctTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGc                                            >  1:3799607/1‑93 (MQ=255)

                                              ctctTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCg                                           <  2:4489052/93‑1 (MQ=255)

                                              ctctTCTCACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCg                                           >  1:5974587/1‑93 (MQ=255)

                                               tcttctGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGt                                          <  2:5507202/93‑1 (MQ=255)

                                                cttctGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTa                                         >  1:10686/1‑93 (MQ=255)

                                                 ttctGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTaa                                        >  2:5639630/1‑93 (MQ=255)

                                                 ttctGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTaa                                        >  2:4330130/1‑93 (MQ=255)

                                                  tctGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTaaa                                       <  2:2404228/93‑1 (MQ=255)

                                                   ctGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTaaaa                                      >  1:583560/1‑93 (MQ=255)

                                                   ctGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTaaaa                                      <  1:5755750/93‑1 (MQ=255)

                                                   ctGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTaaaa                                      <  2:343306/93‑1 (MQ=255)

                                                     gACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAata                                    >  1:1027732/1‑93 (MQ=255)

                                                     gACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAata                                    <  1:5915841/93‑1 (MQ=255)

                                                      aCTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAatat                                   <  1:3560125/93‑1 (MQ=255)

                                                      aCTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAataa                                   >  1:4890143/1‑92 (MQ=255)

                                                       ctgctgAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAAtata                                  >  2:2648951/1‑93 (MQ=255)

                                                       ctgctgAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAAtata                                  >  2:1013535/1‑93 (MQ=255)

                                                        tgctgAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATaa                                 >  1:188755/1‑93 (MQ=255)

                                                         gctgAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAAt                                >  2:5548548/1‑93 (MQ=255)

                                                         gctgAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAAt                                >  2:2920077/1‑93 (MQ=255)

                                                             aaCAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGacc                            <  2:779424/93‑1 (MQ=255)

                                                             aaCAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGacc                            >  2:1342842/1‑93 (MQ=255)

                                                               cAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGaccac                          >  1:724141/1‑93 (MQ=255)

                                                                aaaGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGaccacc                         <  1:910234/93‑1 (MQ=255)

                                                                 aaGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGAccacca                        <  1:14768/93‑1 (MQ=255)

                                                                   gTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCAtt                      <  1:1405885/93‑1 (MQ=255)

                                                                   gTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCAACAtt                      <  2:33163/93‑1 (MQ=255)

                                                                    ttCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTc                     >  1:4692814/1‑93 (MQ=255)

                                                                     tctcTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCg                    >  1:237041/1‑93 (MQ=255)

                                                                       tctACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGaa                  >  2:6169401/1‑93 (MQ=255)

                                                                       tctACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGaa                  <  1:3200155/93‑1 (MQ=255)

                                                                        ctACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAAt                 >  1:4180465/1‑93 (MQ=255)

                                                                        ctACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAAt                 >  1:5045568/1‑93 (MQ=255)

                                                                        ctACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAAt                 >  1:295922/1‑93 (MQ=255)

                                                                         tACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATc                >  1:5531428/1‑93 (MQ=255)

                                                                         tACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATc                <  2:5703904/93‑1 (MQ=255)

                                                                         tACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATc                <  1:1647052/93‑1 (MQ=255)

                                                                          aCTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCt               >  1:2801370/1‑93 (MQ=255)

                                                                            ttCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGt             >  2:3514388/1‑93 (MQ=255)

                                                                            ttCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGt             >  2:1649612/1‑93 (MQ=255)

                                                                            ttCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGt             <  1:4448409/93‑1 (MQ=255)

                                                                            ttCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGt             >  1:5275515/1‑93 (MQ=255)

                                                                             tCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTa            <  1:3955610/93‑1 (MQ=255)

                                                                               aaCGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATg          >  1:4544812/1‑93 (MQ=255)

                                                                               aaCGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATg          <  1:4278397/93‑1 (MQ=255)

                                                                               aaCGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATg          >  1:3724245/1‑93 (MQ=255)

                                                                                aCGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATGc         <  2:3928488/93‑1 (MQ=255)

                                                                                aCGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATGc         >  2:3526323/1‑93 (MQ=255)

                                                                                aCGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATGc         <  1:216758/93‑1 (MQ=255)

                                                                                aCGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATGc         <  1:4196798/93‑1 (MQ=255)

                                                                                  gATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATGCaa       >  1:1863141/1‑93 (MQ=255)

                                                                                   atatTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGGATCTGTATGCaaa      >  2:257351/1‑93 (MQ=255)

                                                                                   atatTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATGCaaa      >  2:2646389/1‑93 (MQ=255)

                                                                                   atatTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATGCaaa      >  1:1916224/1‑93 (MQ=255)

                                                                                      ttGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATGCAAACTa   >  2:6069362/1‑93 (MQ=255)

                                                                                      ttGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATGCAAACTa   <  2:2031745/93‑1 (MQ=255)

                                                                                      ttGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATGCAAACTa   <  1:2693400/93‑1 (MQ=255)

                                                                                      ttGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATGCAAACTa   >  2:3270617/1‑93 (MQ=255)

                                                                                      ttGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATGCAAACTa   >  1:5249450/1‑93 (MQ=255)

                                                                                       tGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATGCAAACTaa  <  2:6201374/93‑1 (MQ=255)

GCTCCAGGTAGCGTTTCACTTCCTGCGTAAAGGCGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGTTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATGCAAACTAA  >  NC_000913/1358836‑1359015

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`