Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,369,184 T→C C315C (TGT→TGC ycjM → putative polysaccharide hydrolase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,369,1840TC99.5% 653.5 / NA 200C315C (TGT→TGCycjMputative polysaccharide hydrolase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (97/102);  minor base A (1/0);  total (98/102)
Fisher's exact test for biased strand distribution p-value = 4.90e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 216 total aligned reads displayed.

AGGCGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGTGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACCCGCT  >  NC_000913/1369094‑1369273
                                                                                          |                                                                                          
aGGCGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTgcgc                                                                                          >  2:906946/1‑93 (MQ=255)
aGGCGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTgcgc                                                                                          <  1:2992062/93‑1 (MQ=255)
   cGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTg                                                                                       <  2:3393084/93‑1 (MQ=255)
     aTGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTggg                                                                                     <  2:1914485/93‑1 (MQ=255)
      tGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGgc                                                                                    >  1:2331809/1‑93 (MQ=255)
        aCGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGgcgc                                                                                  <  2:2480755/93‑1 (MQ=255)
          gAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCaa                                                                                >  1:5232792/1‑93 (MQ=255)
           aaGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCaaa                                                                               >  2:2010912/1‑93 (MQ=255)
            aGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCaaaa                                                                              >  1:199390/1‑93 (MQ=255)
             gCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAAc                                                                             >  1:5309738/1‑93 (MQ=255)
             gCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAAc                                                                             <  1:3703553/93‑1 (MQ=255)
             gCACATATGGTCTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAAc                                                                             <  1:1180816/93‑1 (MQ=255)
               acaTATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCt                                                                           >  1:4861731/1‑93 (MQ=255)
                 atatGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGa                                                                         <  1:4635602/93‑1 (MQ=255)
                  tatGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGac                                                                        <  1:5759801/93‑1 (MQ=255)
                  tatGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCGTTGCGCGTGGGCGCAGAACCTGac                                                                        >  2:2238984/1‑93 (MQ=255)
                    tGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGacac                                                                      <  1:666116/93‑1 (MQ=255)
                     ggTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACt                                                                     <  1:2324270/93‑1 (MQ=255)
                      gtgtACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTa                                                                    >  1:4697192/1‑93 (MQ=255)
                       tgtACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTAc                                                                   <  1:1444423/93‑1 (MQ=255)
                       tgtACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTAc                                                                   <  2:4454915/93‑1 (MQ=255)
                        gtACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTAcc                                                                  <  1:744429/93‑1 (MQ=255)
                        gtACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTAcc                                                                  <  2:5463984/93‑1 (MQ=255)
                         tACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCt                                                                 >  2:2446811/1‑93 (MQ=255)
                         tACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCt                                                                 >  2:6147492/1‑93 (MQ=255)
                         tACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCt                                                                 <  2:5978211/93‑1 (MQ=255)
                          aCCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCtt                                                                <  2:6282060/93‑1 (MQ=255)
                            cAGTTCTCGCTGCCGCCCCTGGTGCTGCATGCGGTGCAAAAACAGAACGTGGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTcc                                                              <  2:2411876/93‑1 (MQ=255)
                             aGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCa                                                             >  2:624375/1‑93 (MQ=255)
                                tctcGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGATACTACCTTCCAGCa                                                          >  1:2571994/1‑93 (MQ=255)
                                tctcGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCa                                                          >  2:5566944/1‑93 (MQ=255)
                                   cGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAaca                                                       <  2:1237416/93‑1 (MQ=255)
                                    gCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAacac                                                      >  2:4349372/1‑93 (MQ=255)
                                      tGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAAcacca                                                   <  1:189882/93‑1 (MQ=255)
                                        ccgccACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACaccacc                                                 >  2:5503357/1‑93 (MQ=255)
                                        ccgccACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACaccacc                                                 <  1:1034088/93‑1 (MQ=255)
                                        ccgccACTGGTGCTGCATGCGGTGCAAAAACAGAACGGTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACaccacc                                                 >  2:5833960/1‑93 (MQ=255)
                                         cgccACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCt                                                <  2:3878623/93‑1 (MQ=255)
                                         cgccACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCt                                                >  1:5599721/1‑93 (MQ=255)
                                         cgccACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCt                                                <  2:638882/93‑1 (MQ=255)
                                          gccACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTg                                               >  2:5333643/1‑93 (MQ=255)
                                          gccACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTg                                               >  1:4957871/1‑93 (MQ=255)
                                          gccACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTg                                               >  1:1561432/1‑93 (MQ=255)
                                           ccACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTgg                                              >  1:2106035/1‑93 (MQ=255)
                                            cACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGt                                             >  2:2794769/1‑93 (MQ=255)
                                            cACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGt                                             >  2:4930629/1‑93 (MQ=255)
                                             aCTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGtt                                            >  1:4066385/1‑93 (MQ=255)
                                             aCTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGtt                                            <  1:5874882/93‑1 (MQ=255)
                                              cTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGttt                                           >  1:1741703/1‑93 (MQ=255)
                                              cTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGttt                                           >  2:454807/1‑93 (MQ=255)
                                               tGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTa                                          >  2:4938353/1‑93 (MQ=255)
                                                ggTGCTGCATGCGGTGCAAAAAAAGAACGTTGAGGGCCTTTGGCCGGGGGGCCAAAACCTGAAACTACCTTCCACCACACCAACTTGGTTTac                                         >  2:2809471/1‑92 (MQ=255)
                                                   gctgcATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACtt                                      <  2:1722279/93‑1 (MQ=255)
                                                   gctgcATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACtt                                      >  1:1613306/1‑93 (MQ=255)
                                                    ctgcATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTc                                     <  2:1947843/93‑1 (MQ=255)
                                                    ctgcATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTc                                     <  2:3663941/93‑1 (MQ=255)
                                                     tgcATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTcc                                    <  2:3722522/93‑1 (MQ=255)
                                                     tgcATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTcc                                    <  2:3126951/93‑1 (MQ=255)
                                                      gcATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCt                                   <  1:2082108/93‑1 (MQ=255)
                                                        aTGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCg                                 >  1:3971929/1‑93 (MQ=255)
                                                         ggCGATGAAAAAACAGAACGTCGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTCCCTTCCAGCAACACCACCTGGTTTAACTTCCTCGc                                <  2:4798847/92‑1 (MQ=255)
                                                            ggTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCctc                             <  2:3558016/93‑1 (MQ=255)
                                                             gTGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCctct                            <  2:136275/93‑1 (MQ=255)
                                                              tGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCtctc                           >  2:1603116/1‑93 (MQ=255)
                                                              tGCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCtctc                           <  2:1393345/93‑1 (MQ=255)
                                                               gCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCa                          >  2:1447719/1‑93 (MQ=255)
                                                               gCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCa                          <  1:5392514/93‑1 (MQ=255)
                                                               gCAAAAACAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCa                          <  1:4235823/93‑1 (MQ=255)
                                                                   aaaCAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGAt                      >  2:271065/1‑93 (MQ=255)
                                                                   aaaCAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGAt                      >  1:2058451/1‑93 (MQ=255)
                                                                    aaCAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATg                     <  1:5019015/93‑1 (MQ=255)
                                                                     aCAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATgg                    <  2:5395853/93‑1 (MQ=255)
                                                                     aCAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATgg                    <  2:4553494/93‑1 (MQ=255)
                                                                      cAGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGc                   >  2:708799/1‑93 (MQ=255)
                                                                       aGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAGCCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCa                  <  1:3526589/93‑1 (MQ=255)
                                                                       aGAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCa                  >  1:5527532/1‑93 (MQ=255)
                                                                        gAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCAt                 <  1:6205942/93‑1 (MQ=255)
                                                                        gAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCAt                 <  1:728871/93‑1 (MQ=255)
                                                                        gAACGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCAt                 <  2:2835397/93‑1 (MQ=255)
                                                                         aaCGTTGAGGCGCTTTGCGCGTGGGCGCAAACCCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATc                <  1:3430509/93‑1 (MQ=255)
                                                                          aCGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCg               >  1:1685613/1‑93 (MQ=255)
                                                                           cGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAATACCACCTGGTTTAACTTCCTCGCCTCTCACGAGGGCATCgg              <  2:6113340/93‑1 (MQ=255)
                                                                           cGTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCgg              >  2:3945187/1‑93 (MQ=255)
                                                                            gTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCggg             >  1:3184927/1‑93 (MQ=255)
                                                                            gTTGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCggg             >  2:1733259/1‑93 (MQ=255)
                                                                             ttGAGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGc            <  2:838368/93‑1 (MQ=255)
                                                                                aGGCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTaa         >  1:809991/1‑93 (MQ=255)
                                                                                 ggCGCTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTaaa        >  1:3829730/1‑93 (MQ=255)
                                                                                   cgcTTTGCGCGTGGGCGCAAACCCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAAcc      <  2:5760389/93‑1 (MQ=255)
                                                                                   cgcTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAAcc      <  1:1861143/93‑1 (MQ=255)
                                                                                    gcTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAAccc     <  2:3485941/93‑1 (MQ=255)
                                                                                    gcTTTGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAAccc     >  1:88568/1‑93 (MQ=255)
                                                                                      tttGCGCGTGGGCGCAAAACCTGACGCTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACCCGc   <  2:3937275/93‑1 (MQ=255)
                                                                                      tttGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACCCGc   >  2:4654307/1‑93 (MQ=255)
                                                                                      tttGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACCCGc   >  1:3068767/1‑93 (MQ=255)
                                                                                      tttGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACCCGc   >  2:2346367/1‑93 (MQ=255)
                                                                                      tttGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACCCGc   <  1:5630134/93‑1 (MQ=255)
                                                                                       ttGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACCCGCt  <  1:4506022/93‑1 (MQ=255)
                                                                                       ttGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACCCGCt  <  2:3633578/93‑1 (MQ=255)
                                                                                       ttGCGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACCCGCt  <  2:2568032/93‑1 (MQ=255)
                                                                                          |                                                                                          
AGGCGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGTGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACCCGCT  >  NC_000913/1369094‑1369273

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: