BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,371,769	T→C	F175S (TTC→TCC)	ycjO →	putative binding‑protein dependent transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,371,769	0	T	C	100.0%	561.0 / NA	173	F175S (TTC→TCC)	ycjO	putative binding‑protein dependent transport protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (81/92); total (81/92)

Only 100 of 183 total aligned reads displayed.

TTCTGCATCTCTATGAGCAGGCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTTCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCAGAGATGGATGGCGCTAATGCCT  >  NC_000913/1371679‑1371858

ttctGCATCTCTATGAGCAGGCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTccc                                                                                         >  1:4937410/1‑93 (MQ=255)

ttctGCATCTCTATGAGCAGGCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTccc                                                                                         <  1:3734194/93‑1 (MQ=255)

ttctGCATCTCTATGAGCAGGCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTccc                                                                                         <  2:5407109/93‑1 (MQ=255)

 tctGCATCTCTATGAGCAGGCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTcccc                                                                                        >  1:3004206/1‑93 (MQ=255)

   tGCATCTCTATGAGCAGGCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCTATCTGGCGCTACTCCCCGt                                                                                      <  2:6149869/93‑1 (MQ=255)

    gCATCTCTATGAGCAGGCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTa                                                                                     <  2:3475038/93‑1 (MQ=255)

    gCATCTCTATGAGCAGGCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTa                                                                                     <  2:567018/93‑1 (MQ=255)

     cATCTCTATGAGCAGGCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTAt                                                                                    >  1:157932/1‑93 (MQ=255)

      aTCTCTATGAGCAGGCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATg                                                                                   >  2:1800574/1‑93 (MQ=255)

       tctcTATGAGCAGGCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGc                                                                                  >  1:6050826/1‑93 (MQ=255)

         tctATGAGCAGGCACCGCTGTGGTTGGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCt                                                                                >  1:5856518/1‑93 (MQ=255)

         tctATGAGCAGGCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCt                                                                                <  1:379212/93‑1 (MQ=255)

          ctATGAGCAGGCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCtt                                                                               <  1:1772781/93‑1 (MQ=255)

           tATGAGCAGGCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCttt                                                                              >  2:4155440/1‑93 (MQ=255)

           tATGAGCAGGCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCttt                                                                              <  2:3180094/93‑1 (MQ=255)

            aTGAGCAGGCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTa                                                                             <  1:2359899/93‑1 (MQ=255)

            aTGAGCAGGCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTa                                                                             <  2:4079008/93‑1 (MQ=255)

            aTGAGCAGGCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTa                                                                             <  1:1969295/93‑1 (MQ=255)

              gAGCAGGCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTAtc                                                                           >  2:4796982/1‑93 (MQ=255)

              gAGCAGGCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTAtc                                                                           <  2:4952484/93‑1 (MQ=255)

               aGCAGGCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTAtct                                                                          <  2:6210131/93‑1 (MQ=255)

                gCAGGCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTAtctc                                                                         >  2:2956184/1‑93 (MQ=255)

                 cAGGCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCg                                                                        <  1:4515781/93‑1 (MQ=255)

                  aGGCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGt                                                                       <  2:5312741/93‑1 (MQ=255)

                  aGGCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGt                                                                       >  2:5416625/1‑93 (MQ=255)

                   ggCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTGTCTCGtt                                                                      >  2:2913621/1‑93 (MQ=255)

                   ggCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCggt                                                                      >  1:6201866/1‑91 (MQ=255)

                   ggCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGtt                                                                      >  2:1497098/1‑93 (MQ=255)

                     cACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTc                                                                    <  2:1181151/93‑1 (MQ=255)

                     cACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTc                                                                    >  2:4754687/1‑93 (MQ=255)

                      aCCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCt                                                                   >  1:5109932/1‑93 (MQ=255)

                       ccGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTg                                                                  <  1:3386187/93‑1 (MQ=255)

                       ccGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTg                                                                  >  1:5047032/1‑93 (MQ=255)

                         gCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGc                                                                >  2:2557187/1‑93 (MQ=255)

                           tgtgGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGa                                                              >  2:1308048/1‑93 (MQ=255)

                             tgGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCCTCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGAtt                                                            >  2:2603219/1‑93 (MQ=255)

                              ggTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGAttt                                                           <  2:2249313/93‑1 (MQ=255)

                               gTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGAtttt                                                          >  2:698669/1‑93 (MQ=255)

                               gTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGAtttt                                                          <  1:2903502/93‑1 (MQ=255)

                                 tCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGc                                                        <  1:5647859/93‑1 (MQ=255)

                                  cGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCa                                                       <  1:3935919/93‑1 (MQ=255)

                                  cGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCa                                                       <  2:1479670/93‑1 (MQ=255)

                                   gATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAg                                                      >  1:4596638/1‑93 (MQ=255)

                                    aTAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGa                                                     <  1:1269165/93‑1 (MQ=255)

                                    aTAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGa                                                     >  2:2933675/1‑93 (MQ=255)

                                    aTAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGa                                                     >  1:2538059/1‑93 (MQ=255)

                                     tAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGAc                                                    >  1:2620049/1‑93 (MQ=255)

                                     tAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGAc                                                    >  1:890426/1‑93 (MQ=255)

                                       aTCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCa                                                  >  2:3153224/1‑93 (MQ=255)

                                       aTCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCa                                                  <  1:251709/93‑1 (MQ=255)

                                        tacGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCAt                                                 >  2:1543496/3‑93 (MQ=255)

                                        tCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCAt                                                 <  1:4212574/93‑1 (MQ=255)

                                        tCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCAt                                                 <  2:6217101/93‑1 (MQ=255)

                                           gggCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGa                                              >  2:4383749/1‑93 (MQ=255)

                                            ggCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGAc                                             <  2:4134470/93‑1 (MQ=255)

                                             gCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACa                                            <  2:4251378/93‑1 (MQ=255)

                                                gTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAAt                                         >  2:2053932/1‑93 (MQ=255)

                                                 tAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATc                                        >  1:3069105/1‑93 (MQ=255)

                                                   gCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGc                                      >  1:1141000/1‑93 (MQ=255)

                                                    cTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCt                                     <  2:3512855/93‑1 (MQ=255)

                                                     tttGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTg                                    <  1:5242027/93‑1 (MQ=255)

                                                      ttGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGt                                   <  2:3875414/93‑1 (MQ=255)

                                                        gtgCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTAc                                 <  1:1113402/93‑1 (MQ=255)

                                                        gtgCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTAc                                 <  2:1093304/93‑1 (MQ=255)

                                                          gCTGGTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGa                               <  1:1061652/93‑1 (MQ=255)

                                                           cTGTTGGTGCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGaa                              <  2:188875/93‑1 (MQ=255)

                                                              gtggtgCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCg                           <  1:1577899/93‑1 (MQ=255)

                                                                ggtgCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGc                         >  1:5418629/1‑93 (MQ=255)

                                                                ggtgCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGc                         <  1:3359489/93‑1 (MQ=255)

                                                                ggtgCTGGTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGc                         >  2:6196487/1‑93 (MQ=255)

                                                                 gtgCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCa                        <  1:5168443/93‑1 (MQ=255)

                                                                 gtgCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCa                        >  2:4999209/1‑93 (MQ=255)

                                                                   gCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCaga                      <  1:5908232/93‑1 (MQ=255)

                                                                   gCTGTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCaga                      <  1:1446807/93‑1 (MQ=255)

                                                                     cgTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCAgaga                    <  2:5725017/92‑1 (MQ=255)

                                                                      gTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCAGAgat                   <  1:659253/93‑1 (MQ=255)

                                                                      gTTCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCAGAgat                   <  1:3338655/93‑1 (MQ=255)

                                                                       ttCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCAGAgatg                  >  2:5782041/1‑93 (MQ=255)

                                                                       ttCGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCAGAgatg                  >  1:3155246/1‑93 (MQ=255)

                                                                         cGCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCAGAgatgga                <  1:3452519/93‑1 (MQ=255)

                                                                          gCCATCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCAGAgatggat               >  2:4584775/1‑93 (MQ=255)

                                                                           ccATCTTGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCAGAgatggatg              <  1:2084410/93‑1 (MQ=255)

                                                                             aTCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGCAGCGGCAGAGCTGGATGgc            >  2:5519064/1‑93 (MQ=255)

                                                                             aTCTGGCGCTACTCCCCGTATGCCTTTAGCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCAGAGATGGATGgc            <  1:5695427/93‑1 (MQ=255)

                                                                              tCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCAGAGATGGATGgcg           >  2:3694648/1‑93 (MQ=255)

                                                                              tCTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCAGAGATGGATGgcg           >  1:1914137/1‑93 (MQ=255)

                                                                               cTGGCGCTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCAGAGATGGATGgcgc          <  2:3758337/93‑1 (MQ=255)

                                                                                  gcgcTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCAGAGATGGATGGCGCTaa       >  1:4873494/1‑93 (MQ=255)

                                                                                  gcgcTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCAGAGATGGATGGCGCTaa       <  1:5048169/93‑1 (MQ=255)

                                                                                  gcgcTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCAGAGATGGATGGCGCTaa       >  1:3664021/1‑93 (MQ=255)

                                                                                  gcgcTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCAGAGATGGATGGCGCTaa       <  2:3460399/93‑1 (MQ=255)

                                                                                  gcgcTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCAGAGATGGATGGCGCTaa       <  1:1710500/93‑1 (MQ=255)

                                                                                  gcgcTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCAGAGATGGATGGCGCTaa       >  2:1617358/1‑93 (MQ=255)

                                                                                  gcgcTACTCCCCGTATGCCTTTATCTCGTCTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCAGAGATGGATGGCGCTaa       >  1:4157546/1‑93 (MQ=255)

                                                                                   cgcTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCAGAGATGGATGGCGCTAAt      <  1:955623/93‑1 (MQ=255)

                                                                                    gcTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCAGAGATGGATGGCGCTAATg     >  1:214016/1‑93 (MQ=255)

                                                                                     cTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCAGAGATGGATGGCGCTAATGc    <  2:772306/93‑1 (MQ=255)

                                                                                     cTACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCAGAGATGGATGGCGCTAATGc    >  2:3236879/1‑93 (MQ=255)

                                                                                      tACTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCAGAGATGGATGGCGCTAATGcc   >  2:5102026/1‑93 (MQ=255)

                                                                                       aCTCCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCAGAGATGGATGGCGCTAATGCCt  <  2:1698751/93‑1 (MQ=255)

TTCTGCATCTCTATGAGCAGGCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTTCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCAGAGATGGATGGCGCTAATGCCT  >  NC_000913/1371679‑1371858

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`