BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,372,616	T→C	I168T (ATC→ACC)	ycjP →	putative transport system permease protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,372,616	0	T	C	100.0%	682.2 / NA	215	I168T (ATC→ACC)	ycjP	putative transport system permease protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (108/107); total (108/107)

Only 100 of 224 total aligned reads displayed.

TTTACGACACTGAGATGGCGCTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCATCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCATCACCGTGCCGTTGGCGATGTCCG  >  NC_000913/1372526‑1372705

tttACGACACTGAGATGGCGCTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCAccc                                                                                         >  1:2210811/1‑93 (MQ=255)

tttACGACACTGAGATGGCGCTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCAccc                                                                                         <  2:405279/93‑1 (MQ=255)

    cGACACTGAGATGGCGCTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGa                                                                                     <  2:4772497/93‑1 (MQ=255)

    cGACACTGAGATGGCGCTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGa                                                                                     >  1:4705917/1‑93 (MQ=255)

      acacTGAGATGGCGCTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCCCCCCCGATg                                                                                   <  1:2271012/93‑1 (MQ=255)

      acacTGAGATGGCGCTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATg                                                                                   >  1:3943122/1‑93 (MQ=255)

        acTGAGATGGCGCTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATgag                                                                                 >  2:3269871/1‑93 (MQ=255)

        acTGAGATGGCGCTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATgag                                                                                 <  2:4904026/93‑1 (MQ=255)

         cTGAGATGGCGCTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATgaga                                                                                <  1:3708007/93‑1 (MQ=255)

          tGAGATGGCGCTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGAt                                                                               <  2:3538100/93‑1 (MQ=255)

           gagaTGGCGCTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATc                                                                              <  1:1289995/93‑1 (MQ=255)

           gagaTGGCGCTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATc                                                                              <  1:512095/93‑1 (MQ=255)

           gagaTGGCGCTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATc                                                                              <  1:5384178/93‑1 (MQ=255)

            agaTGGCGCTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCg                                                                             >  2:5558277/1‑93 (MQ=255)

              aTGGCGCTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCgaa                                                                           <  1:1914888/93‑1 (MQ=255)

              aTGGCGCTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCgaa                                                                           <  1:978694/93‑1 (MQ=255)

                ggCGCTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCgaaga                                                                         <  1:1488061/93‑1 (MQ=255)

                ggCGCTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCgaaga                                                                         <  2:5390037/93‑1 (MQ=255)

                 gcgcTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGCTGAGATCgaagaa                                                                        >  2:5453786/1‑93 (MQ=255)

                  cgcTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGaagaag                                                                       >  2:1154015/1‑93 (MQ=255)

                  cgcTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGaagaag                                                                       >  1:4468473/1‑93 (MQ=255)

                  cgcTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGaagaag                                                                       <  1:1726586/93‑1 (MQ=255)

                   gcTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAgc                                                                      >  2:1564196/1‑93 (MQ=255)

                   gcTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAgc                                                                      >  2:4509742/1‑93 (MQ=255)

                   gcTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAgc                                                                      <  2:5075543/93‑1 (MQ=255)

                    cTGATCATCACCATGGTGACGCAATCTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACCCCACCCCCGATGAGATCGAAGAAgcg                                                                     <  1:1524089/93‑1 (MQ=255)

                    cTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAgcg                                                                     >  1:3315050/1‑93 (MQ=255)

                    cTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAgcg                                                                     <  2:192338/93‑1 (MQ=255)

                     tGATCATCACCATGGTGACGCAACCTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAgcgg                                                                    <  1:3196771/93‑1 (MQ=255)

                      gATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAgcggc                                                                   <  2:3871407/93‑1 (MQ=255)

                       atcatcACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAgcggcg                                                                  <  1:669972/93‑1 (MQ=255)

                       atcatcACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAgcggcg                                                                  >  1:4403903/1‑93 (MQ=255)

                        tcatcaCCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCga                                                                 >  1:2991899/1‑93 (MQ=255)

                         catcaCCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCgat                                                                >  1:1101212/1‑93 (MQ=255)

                           tcaCCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCgatga                                                              >  2:3794834/1‑93 (MQ=255)

                           tcaCCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCgatga                                                              >  2:5286301/1‑93 (MQ=255)

                           tcaCCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCgatga                                                              <  1:5818154/93‑1 (MQ=255)

                            caCCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCgatgat                                                             >  2:5610179/1‑93 (MQ=255)

                             aCCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGatgatg                                                            >  1:1150032/1‑93 (MQ=255)

                              ccATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATgatgg                                                           >  1:4646557/1‑93 (MQ=255)

                              ccATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATgatgg                                                           <  1:101035/93‑1 (MQ=255)

                               cATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATgatgga                                                          <  2:464661/93‑1 (MQ=255)

                               cATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATgatgga                                                          >  1:4282932/1‑93 (MQ=255)

                               cATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATgatgga                                                          <  1:4526903/93‑1 (MQ=255)

                                 tGGTGTCGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATgatggatg                                                        >  2:3991393/1‑93 (MQ=255)

                                 tGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATgatggatg                                                        <  1:3663611/93‑1 (MQ=255)

                                     gACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCt                                                    <  2:3634116/93‑1 (MQ=255)

                                         cAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAAc                                                >  1:4519293/1‑93 (MQ=255)

                                         cAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACAACACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGCCCTCAAc                                                >  2:4095951/1‑93 (MQ=255)

                                          aaaCTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAAcc                                               >  2:5312307/1‑93 (MQ=255)

                                          aaaCTCTGCCCACCGCAGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAAcc                                               <  1:831467/93‑1 (MQ=255)

                                           aaCTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCg                                              >  2:1939831/1‑93 (MQ=255)

                                            aCTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGt                                             >  1:4152775/1‑93 (MQ=255)

                                             ctctGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTc                                            <  1:946335/93‑1 (MQ=255)

                                                   ccACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCaaa                                      >  2:6108273/1‑93 (MQ=255)

                                                   ccACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCaaa                                      >  2:1300756/1‑93 (MQ=255)

                                                     ccccccgTGTTTATGCTGAAAAGCTACTTCGGCCCCCCCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAAtt                                    <  1:1388144/89‑1 (MQ=255)

                                                       cgcctTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTAt                                  <  2:4547498/93‑1 (MQ=255)

                                                        gccgTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATc                                 >  2:2249273/1‑93 (MQ=255)

                                                          cgTGTTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCtt                               <  2:4854521/93‑1 (MQ=255)

                                                           gtgtTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGGGATGATGGATGGCCTCAACCGTCGGCAAATTATCTTc                              >  2:280789/1‑93 (MQ=255)

                                                           gtgtTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTc                              <  1:1595054/93‑1 (MQ=255)

                                                           gtgtTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTc                              <  2:6184139/93‑1 (MQ=255)

                                                           gtgtTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTc                              >  2:2631041/1‑93 (MQ=255)

                                                           gtgtTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTc                              <  2:2971975/93‑1 (MQ=255)

                                                           gtgtTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTc                              <  2:2449231/93‑1 (MQ=255)

                                                            tgtTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTcc                             >  1:4935603/1‑93 (MQ=255)

                                                            tgtTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTcc                             >  2:4188253/1‑93 (MQ=255)

                                                             gtTTATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCg                            >  2:3047140/1‑93 (MQ=255)

                                                             gtTTATGCTGAAAAGCTACTGCGACACCTCCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCg                            <  2:1468813/93‑1 (MQ=255)

                                                              tttATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGc                           <  1:5479089/93‑1 (MQ=255)

                                                              tttATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGc                           <  1:275949/93‑1 (MQ=255)

                                                               ttATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCa                          >  1:6179868/1‑93 (MQ=255)

                                                                tATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCAt                         >  2:4831526/1‑93 (MQ=255)

                                                                tATGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCAt                         >  2:5843872/1‑93 (MQ=255)

                                                                 aTGCTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCATc                        >  2:6060030/1‑93 (MQ=255)

                                                                    cTGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCATCAcc                     <  2:1276401/93‑1 (MQ=255)

                                                                     tGAAAATCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCATCACCg                    <  2:1783799/93‑1 (MQ=255)

                                                                     tGAAAAGCTACTTCGACACCACCCTCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCATCACCg                    <  1:2604817/93‑1 (MQ=255)

                                                                     tGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCATCACCg                    <  2:712861/93‑1 (MQ=255)

                                                                     tGAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCATCACCg                    >  2:4943285/1‑93 (MQ=255)

                                                                      gAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCATCACCGt                   >  1:521946/1‑93 (MQ=255)

                                                                      gAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCATCACCGt                   >  1:2951897/1‑93 (MQ=255)

                                                                      gAAAAGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCATCACCGt                   <  1:5586522/93‑1 (MQ=255)

                                                                         aggCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCATCACCGCGcc                <  2:832013/91‑1 (MQ=255)

                                                                         aaGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCATCACCGTGcc                >  1:572604/1‑93 (MQ=255)

                                                                          aGCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCATCACCGTGCCg               >  1:3462029/1‑93 (MQ=255)

                                                                           gCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCATCACCGTGCCGt              <  2:5490749/93‑1 (MQ=255)

                                                                           gCTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCATCACCGTGCCGt              >  1:2463410/1‑93 (MQ=255)

                                                                            cTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCATCACCGTGCCGtt             <  2:5218817/93‑1 (MQ=255)

                                                                            cTACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCGTCCGCATCACCGTGCCGtt             <  2:6132831/93‑1 (MQ=255)

                                                                             tACTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCATCACCGTGCCGTTg            <  2:5236179/93‑1 (MQ=255)

                                                                              aCTTCGACACCGCCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCATCACCGTGCCGTTgg           <  1:2113175/93‑1 (MQ=255)

                                                                               cTTCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCATCACCGTGCCGTTGGc          >  2:4980889/1‑93 (MQ=255)

                                                                                ttCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCATCACCGTGCCGTTGGCg         >  2:3409799/1‑93 (MQ=255)

                                                                                 tCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCATCACCGTGCCGTTGGCGa        <  1:3050153/93‑1 (MQ=255)

                                                                                 tCGACACCACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCATCACCGTGCCGTTGGCGa        <  1:1951547/93‑1 (MQ=255)

                                                                                     caccacCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCATCAACGTGACGTTGGCGATGTc    >  1:6189762/1‑93 (MQ=255)

                                                                                       ccACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCATCACCGTGCCGTTGGCGATGTCCg  >  2:5332347/1‑93 (MQ=255)

                                                                                       ccACCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCATCACCGTGCCGTTGGCGATGTCCg  <  1:6218400/93‑1 (MQ=255)

TTTACGACACTGAGATGGCGCTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCATCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCATCACCGTGCCGTTGGCGATGTCCG  >  NC_000913/1372526‑1372705

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`