BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,377,715	G→A	R603H (CGC→CAC)	ycjT →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,377,715	0	G	A	100.0%	654.5 / NA	181	R603H (CGC→CAC)	ycjT	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (85/96); total (85/96)

Only 100 of 194 total aligned reads displayed.

AACAAGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCGCACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTGGC  >  NC_000913/1377625‑1377804

aaCAAGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCACTCTGCAATTTTATGAACCGcaca                                                                                         <  1:184039/93‑1 (MQ=255)

aaCAAGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGcaca                                                                                         <  2:5131727/93‑1 (MQ=255)

 aCAAGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCacac                                                                                        <  1:2937486/93‑1 (MQ=255)

   aaGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTa                                                                                      >  2:3581934/1‑93 (MQ=255)

    aGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTAt                                                                                     <  1:130583/93‑1 (MQ=255)

    aGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTAt                                                                                     <  2:4864345/93‑1 (MQ=255)

    aGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTAt                                                                                     >  1:3861911/1‑93 (MQ=255)

     gCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTAtt                                                                                    <  2:4175301/93‑1 (MQ=255)

     gCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTAtt                                                                                    <  1:6182112/93‑1 (MQ=255)

       tGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCa                                                                                  <  2:3631678/93‑1 (MQ=255)

        gATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCAc                                                                                 >  2:972951/1‑93 (MQ=255)

        gATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCAc                                                                                 <  1:4497862/93‑1 (MQ=255)

        gATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCAc                                                                                 <  1:1658955/93‑1 (MQ=255)

          tgtgGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATTAACCGCACACTATTCACGa                                                                               >  2:1388427/1‑93 (MQ=255)

           gtggtgATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGAc                                                                              <  1:3822998/93‑1 (MQ=255)

                gATGCTCAATTGCATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCCCGACTCGTc                                                                         <  1:1366916/93‑1 (MQ=255)

                gATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTc                                                                         <  2:2235383/93‑1 (MQ=255)

                gATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTc                                                                         >  2:4664848/1‑93 (MQ=255)

                 aTGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCa                                                                        <  2:174871/93‑1 (MQ=255)

                   gCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCAtt                                                                      <  2:1204306/93‑1 (MQ=255)

                     tCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTaa                                                                    <  2:735542/93‑1 (MQ=255)

                      cAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAg                                                                   <  1:2749879/93‑1 (MQ=255)

                      cAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAg                                                                   >  1:3606323/1‑93 (MQ=255)

                       aaTTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGt                                                                  >  1:5586399/1‑93 (MQ=255)

                       aaTTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGt                                                                  <  1:5842713/93‑1 (MQ=255)

                       aaTTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGt                                                                  <  1:4045963/93‑1 (MQ=255)

                         ttACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTaa                                                                <  2:3041730/93‑1 (MQ=255)

                         ttACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTaa                                                                <  1:518958/93‑1 (MQ=255)

                           aCATGCTGCCGGAGCAGTTCTCAGCGGCATCGGGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAg                                                              >  1:5213793/1‑93 (MQ=255)

                            cATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGc                                                             <  2:3938327/93‑1 (MQ=255)

                            cATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGc                                                             <  1:991487/93‑1 (MQ=255)

                              tgctgcCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCaa                                                           <  1:281683/93‑1 (MQ=255)

                               gctgcCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAAt                                                          <  1:2812065/93‑1 (MQ=255)

                               gctgcCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAAt                                                          <  1:220700/93‑1 (MQ=255)

                                 tgcCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATcc                                                        >  1:6019991/1‑93 (MQ=255)

                                 tgcCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATcc                                                        >  2:575536/1‑93 (MQ=255)

                                 tgcCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATcc                                                        >  1:6244123/1‑93 (MQ=255)

                                  gcCGGAGCAGTTCTCAGGGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCa                                                       <  2:11040/93‑1 (MQ=255)

                                  gcCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCa                                                       >  2:3784776/1‑93 (MQ=255)

                                   ccGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCAc                                                      <  1:4835291/93‑1 (MQ=255)

                                   ccGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCAc                                                      >  2:4400344/1‑93 (MQ=255)

                                    cGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACg                                                     <  1:5899896/93‑1 (MQ=255)

                                    cGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACg                                                     >  1:2573920/1‑93 (MQ=255)

                                     ggAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACgg                                                    >  1:362169/1‑93 (MQ=255)

                                      gAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGc                                                   <  1:6263791/93‑1 (MQ=255)

                                        gCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCAt                                                 >  1:5568017/1‑93 (MQ=255)

                                         cAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCAtt                                                <  1:4081503/93‑1 (MQ=255)

                                         cAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCAtt                                                <  1:784265/93‑1 (MQ=255)

                                           gTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATTCACGGCAttgt                                              >  1:3694975/1‑93 (MQ=255)

                                           gTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCAttgt                                              <  1:5302791/93‑1 (MQ=255)

                                           gTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCAttgt                                              >  1:1684561/1‑93 (MQ=255)

                                           gTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCAttgt                                              >  2:561485/1‑93 (MQ=255)

                                            ttCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCAttgtt                                             <  1:6135255/93‑1 (MQ=255)

                                            ttCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCAttgtt                                             >  2:259061/1‑93 (MQ=255)

                                             tctcAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCAttgttg                                            >  1:3747630/1‑93 (MQ=255)

                                               tcAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGcc                                          <  2:524275/93‑1 (MQ=255)

                                                 aGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGc                                        <  1:5910887/93‑1 (MQ=255)

                                                 aGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGc                                        <  2:1849169/93‑1 (MQ=255)

                                                   cGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCAc                                      <  2:2430145/93‑1 (MQ=255)

                                                     gCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGc                                    <  2:4778140/93‑1 (MQ=255)

                                                     gCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGc                                    <  1:5645893/93‑1 (MQ=255)

                                                      cATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCt                                   >  2:3170956/1‑93 (MQ=255)

                                                       aTCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCtg                                  <  1:1583617/93‑1 (MQ=255)

                                                       aTCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCtg                                  <  2:6253672/93‑1 (MQ=255)

                                                        tCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCtgt                                 <  2:2090032/93‑1 (MQ=255)

                                                        tCGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCtgt                                 <  1:2699140/93‑1 (MQ=255)

                                                         cGTGTCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCtgtg                                >  1:733891/1‑93 (MQ=255)

                                                           tgtCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGc                              >  2:2282040/1‑93 (MQ=255)

                                                           tgtCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGc                              >  2:695506/1‑93 (MQ=255)

                                                            tttttGCAATTCTGCAATTTTATGACCCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGcc                             <  2:5895455/90‑1 (MQ=255)

                                                            gtCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGcc                             <  2:1556043/93‑1 (MQ=255)

                                                             tCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCct                            >  2:4534702/1‑93 (MQ=255)

                                                             tCTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCct                            <  2:239007/93‑1 (MQ=255)

                                                              cTTGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCctg                           >  1:2506220/1‑93 (MQ=255)

                                                               ttGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCctgc                          <  2:4091982/93‑1 (MQ=255)

                                                                tGCCAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCctgct                         <  1:2249667/93‑1 (MQ=255)

                                                                tGCAAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCctgct                         >  2:6059413/1‑93 (MQ=255)

                                                                   cAATCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGAc                      >  1:2072998/1‑93 (MQ=255)

                                                                    aaTCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGAcc                     >  1:4885837/1‑93 (MQ=255)

                                                                      tCTGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCa                   >  1:1046098/1‑93 (MQ=255)

                                                                        tGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCaaa                 >  2:3379299/1‑93 (MQ=255)

                                                                        tGCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCaaa                 >  1:1985186/1‑93 (MQ=255)

                                                                         gCAATTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAg                <  2:1482571/93‑1 (MQ=255)

                                                                           aaTTTTATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGtt              <  2:4336737/93‑1 (MQ=255)

                                                                             ttttATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTAt            >  2:4935091/1‑93 (MQ=255)

                                                                              tttATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATc           <  2:1916144/93‑1 (MQ=255)

                                                                               ttATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCa          <  1:932737/93‑1 (MQ=255)

                                                                               ttATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCa          <  2:1931866/93‑1 (MQ=255)

                                                                               ttATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCa          <  2:2103688/93‑1 (MQ=255)

                                                                                tATGAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGGCCCAAAGCTATCAg         >  1:393584/1‑93 (MQ=255)

                                                                                  tGACCCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGtt       <  1:3127465/93‑1 (MQ=255)

                                                                                   gAACCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTc      <  2:1681984/93‑1 (MQ=255)

                                                                                    aaCCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCt     <  1:755198/93‑1 (MQ=255)

                                                                                    aaCCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCt     >  1:1549971/1‑93 (MQ=255)

                                                                                     aCCGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTg    <  2:5658525/93‑1 (MQ=255)

                                                                                      ccGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTgg   <  2:1361347/93‑1 (MQ=255)

                                                                                      ccGCACACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTgg   <  1:5953628/93‑1 (MQ=255)

                                                                                       cgcaCACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTGgc  >  2:4205486/1‑93 (MQ=255)

                                                                                       cgcaCACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTGgc  >  1:5730911/1‑93 (MQ=255)

                                                                                       cgcaCACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTGgc  <  1:1229837/93‑1 (MQ=255)

AACAAGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCGCACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTGGC  >  NC_000913/1377625‑1377804

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`