BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,426,410	T→C	Q114R (CAG→CGG)	trs55 ←	IS5 transposase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,426,410	0	T	C	100.0%	668.4 / NA	207	Q114R (CAG→CGG)	trs55	IS5 transposase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (102/105); total (102/105)

Only 100 of 211 total aligned reads displayed.

CATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCTGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCGGGCAAACAGGCGCATGGAGGC  >  NC_000913/1426321‑1426498

cATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATgccgct                                                                                       <  1:6069950/93‑1 (MQ=255)

 aTCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTc                                                                                      <  1:2891084/93‑1 (MQ=255)

  tCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTTACGGGCCAGTTGATGCCGGTCg                                                                                     >  2:4316020/1‑93 (MQ=255)

  tCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCg                                                                                     >  1:3153531/1‑93 (MQ=255)

   ccaccaAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGa                                                                                    <  2:4225853/93‑1 (MQ=255)

     accaAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGc                                                                                  <  2:1605400/93‑1 (MQ=255)

        aaaGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCTAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAgg                                                                               >  1:4373012/1‑93 (MQ=255)

        aaaGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAgg                                                                               >  1:352513/1‑93 (MQ=255)

        aaaGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAgg                                                                               <  2:5501984/93‑1 (MQ=255)

        aaaGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAgg                                                                               <  1:690207/93‑1 (MQ=255)

         aaGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAggg                                                                              >  1:732831/1‑92 (MQ=255)

              ccTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCgg                                                                         <  2:1014773/93‑1 (MQ=255)

               cTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGa                                                                        >  1:1941029/1‑93 (MQ=255)

               cTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGa                                                                        >  1:1088338/1‑93 (MQ=255)

                 tGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGgaa                                                                      >  2:5384707/1‑93 (MQ=255)

                 tGGGCCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGaaa                                                                      <  2:1295638/93‑1 (MQ=255)

                  gggTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAAAAATTGACGGGCCAGTTGGTTCCGCTCGAGCAGGGGGCGGAAAt                                                                     >  2:113874/1‑93 (MQ=14)

                   ggTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAAtt                                                                    <  2:4565050/93‑1 (MQ=255)

                     tcatcaTGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCa                                                                  >  2:1408056/1‑93 (MQ=37)

                     tcatcaTGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCa                                                                  >  1:3568695/1‑93 (MQ=37)

                     tcatcaTGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCa                                                                  >  1:4164049/1‑93 (MQ=37)

                       atcatGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCatg                                                                >  2:2672941/1‑93 (MQ=255)

                        tcatGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCatga                                                               <  1:5862286/93‑1 (MQ=255)

                        tcatGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCatga                                                               <  2:5147786/93‑1 (MQ=255)

                           tGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGAtgg                                                            >  1:2784123/1‑93 (MQ=255)

                           tGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGAGGCGGAAATTCATGAtgg                                                            >  1:2776408/1‑93 (MQ=255)

                              cGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGAtggtgg                                                         <  1:5645732/93‑1 (MQ=255)

                              cGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGAtggtgg                                                         >  1:5527412/1‑93 (MQ=255)

                              cGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGAtggtgg                                                         <  1:5193958/93‑1 (MQ=255)

                               gCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATggtggt                                                        <  1:6268456/93‑1 (MQ=255)

                                ccTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGgtggtg                                                       <  2:655627/93‑1 (MQ=255)

                                  tGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCg                                                     >  2:2801502/1‑93 (MQ=255)

                                   gCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGa                                                    >  1:3740089/1‑93 (MQ=255)

                                    cTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGAt                                                   <  2:3215208/93‑1 (MQ=255)

                                     ttCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATc                                                  <  1:4119996/93‑1 (MQ=255)

                                      tCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATcc                                                 >  2:2003586/1‑93 (MQ=255)

                                       cGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCg                                                <  2:2281826/93‑1 (MQ=255)

                                       cGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCg                                                <  2:234999/93‑1 (MQ=255)

                                        ggCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCgg                                               <  1:5140765/93‑1 (MQ=255)

                                         gccagccaGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGc                                              <  1:3323616/93‑1 (MQ=255)

                                          ccagccagCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCa                                             <  2:3660489/93‑1 (MQ=255)

                                          ccagccagCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCa                                             <  2:1098524/93‑1 (MQ=255)

                                            agccagcGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAgg                                           >  1:3466906/1‑93 (MQ=255)

                                             gccagcGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAggg                                          >  1:2592901/1‑93 (MQ=255)

                                             gccagcGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAggg                                          <  1:962759/93‑1 (MQ=255)

                                              ccagcGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGgc                                         <  1:4530714/93‑1 (MQ=255)

                                              ccagcGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGgc                                         <  1:628244/93‑1 (MQ=255)

                                              ccagcGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGgc                                         >  1:3885620/1‑93 (MQ=255)

                                                agcGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGgcgc                                       <  1:4820624/93‑1 (MQ=255)

                                                 gcGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGT‑GTGCGATCCGGCAAGGCGCTa                                     >  1:6181049/1‑93 (MQ=14)

                                                  cGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTa                                     >  1:1536575/1‑93 (MQ=255)

                                                   gATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTAt                                    <  2:3072580/93‑1 (MQ=255)

                                                   gATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTAt                                    <  2:5591247/93‑1 (MQ=255)

                                                    aTTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATc                                   <  1:4134166/93‑1 (MQ=255)

                                                    aTTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATc                                   <  2:4050407/93‑1 (MQ=255)

                                                       gATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAg                                >  1:389212/1‑93 (MQ=255)

                                                       gATGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAg                                >  1:2337255/1‑93 (MQ=255)

                                                        aTGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAgg                               <  1:4762807/93‑1 (MQ=255)

                                                         tGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAggg                              >  2:189439/1‑93 (MQ=255)

                                                         tGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAggg                              >  1:1103792/1‑93 (MQ=255)

                                                         tGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAggg                              >  2:1330601/1‑93 (MQ=255)

                                                         tGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAggg                              >  2:4581500/1‑93 (MQ=255)

                                                         tGGTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAggg                              >  1:5479203/1‑93 (MQ=255)

                                                          ggTCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGa                             >  2:6059157/1‑93 (MQ=255)

                                                            tCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATa                           >  2:2178987/1‑93 (MQ=255)

                                                            tCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATa                           >  2:3751488/1‑93 (MQ=255)

                                                            tCTTGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATa                           <  1:1344816/93‑1 (MQ=255)

                                                              ttGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAAt                         >  2:1461612/1‑93 (MQ=255)

                                                               tGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATc                        >  2:5680387/1‑93 (MQ=255)

                                                               tGAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATc                        <  2:1694167/93‑1 (MQ=255)

                                                                gAACAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCg                       <  2:4914800/93‑1 (MQ=255)

                                                                 aaCAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGGTAATCgg                      >  1:3117333/1‑93 (MQ=255)

                                                                 aaCAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCgg                      >  2:5933543/1‑93 (MQ=255)

                                                                 aaCAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCgg                      >  1:3201184/1‑93 (MQ=255)

                                                                  aCAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCggg                     <  1:726760/93‑1 (MQ=255)

                                                                   cAATTGTCGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCGGGc                    >  2:5237932/1‑93 (MQ=255)

                                                                   cAATTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCGGGc                    >  1:3534295/1‑93 (MQ=255)

                                                                    aaTTGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCGGGCa                   <  2:6221690/93‑1 (MQ=255)

                                                                      ttGACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCGGGCaaa                 <  1:1420879/93‑1 (MQ=255)

                                                                       tGACGGGCCAGTTTATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCGGGCAAAc                <  1:5283471/93‑1 (MQ=255)

                                                                        gACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCGGGCAAACa               <  2:2649484/93‑1 (MQ=255)

                                                                        gACGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCGGGCAAACa               <  1:2387682/93‑1 (MQ=255)

                                                                         aCGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCGGGCAAACAg              <  2:4970215/93‑1 (MQ=255)

                                                                         aCGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCGGGCAAACAg              <  2:2565352/93‑1 (MQ=255)

                                                                          cGGGCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCGGGCAAACAgg             >  2:4201231/1‑93 (MQ=255)

                                                                           gggCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCGGGCAAACAGgc            >  1:1439361/1‑93 (MQ=255)

                                                                           gggCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCGGGCAAACAGgc            >  1:4321157/1‑93 (MQ=255)

                                                                             gCCAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCGGGCAAACAGgcgc          >  2:785606/1‑93 (MQ=255)

                                                                              ccAGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCGGGCAAACAGGCGCa         <  2:1055130/93‑1 (MQ=255)

                                                                                aGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCGGGCAAACAGGCGCATg       <  1:2532174/93‑1 (MQ=255)

                                                                                aGTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCGGGCAAACAGGCGCATg       >  1:5021478/1‑93 (MQ=255)

                                                                                 gTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCGGGCAAACAGGCGCATgg      >  1:1680247/1‑93 (MQ=255)

                                                                                 gTTGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCGGGCAAACAGGCGCATgg      >  2:3963735/1‑93 (MQ=255)

                                                                                  ttGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCGGGCAAACAGGCGCATGGa     <  1:2797590/93‑1 (MQ=255)

                                                                                  ttGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCGGGCAAACAGGCGCATGGa     <  2:2819109/93‑1 (MQ=255)

                                                                                   tGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCGGGCAAACAGGCGCATGGAg    <  2:5626859/93‑1 (MQ=255)

                                                                                   tGATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCAGGCAAACAGGAGCATGGAg    <  2:6108014/93‑1 (MQ=255)

                                                                                    gATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCTGGGCGCTATCCAGGGATAATCGGGCAAACAGGCGCATGGAgg   <  1:3381470/93‑1 (MQ=255)

                                                                                    gATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCGGGCAAACAGGCGCATGGAgg   <  1:6085648/93‑1 (MQ=255)

                                                                                    gATGCCGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCGGGCAAACAGGCGCATGGAgg   >  2:4730646/1‑93 (MQ=255)

CATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCTGCTCGAGCAGGTGGCGGAAATTCATGATGGTGGTGCGATCCGGCAGGGCGCTATCCAGGGATAATCGGGCAAACAGGCGCATGGAGGC  >  NC_000913/1426321‑1426498

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`