BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	160,649	A→G	intergenic (‑45/+133)	dksA ← / ← sfsA	DksA/putative regulator for maltose metabolism

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	160,649	0	A	G	100.0%	683.1 / NA	213	intergenic (‑45/+133)	dksA/sfsA	DksA/putative regulator for maltose metabolism
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (96/117); total (96/117)

Only 100 of 237 total aligned reads displayed.

CGAGAATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGAAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACTGTGTGAGGAAAAGCGTATTT  >  NC_000913/160559‑160739

cGAGAATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGgaa                                                                                          <  1:5134035/93‑1 (MQ=255)

 gagaATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGgaaa                                                                                         >  1:819099/1‑93 (MQ=255)

  agaATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGgaaaa                                                                                        <  1:5229140/93‑1 (MQ=255)

  agaATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGgaaaa                                                                                        >  2:264692/1‑93 (MQ=255)

  agaATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGgaaaa                                                                                        <  1:2693125/93‑1 (MQ=255)

  agaATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGgaaaa                                                                                        >  1:6231652/1‑93 (MQ=255)

     aTACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAAAAGGCACTATCGATCCCCATGTTCGGGGAGAAGATGa                                                                                     >  1:3035829/1‑93 (MQ=255)

      tACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAg                                                                                    >  1:1849393/1‑93 (MQ=255)

      tACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAg                                                                                    >  2:1772711/1‑93 (MQ=255)

         tCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTGTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGcc                                                                                 <  2:4741843/93‑1 (MQ=255)

           aGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGTAAATGAGGCCGc                                                                               >  1:5554948/1‑93 (MQ=255)

           aGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGc                                                                               >  1:1159136/1‑93 (MQ=255)

           aGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGc                                                                               >  2:5612415/1‑93 (MQ=255)

            gggACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCt                                                                              <  2:2916364/93‑1 (MQ=255)

             gtaCGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCta                                                                             <  1:4863826/91‑1 (MQ=255)

              gACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCtat                                                                            <  1:2867689/93‑1 (MQ=255)

               aCGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCtata                                                                           <  2:122005/93‑1 (MQ=255)

                cGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATaa                                                                          >  1:2296013/1‑93 (MQ=255)

                 gATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATaaa                                                                         <  2:3246088/93‑1 (MQ=255)

                 gATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATaaa                                                                         <  2:4013727/93‑1 (MQ=255)

                  aTGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAAt                                                                        <  2:5803433/93‑1 (MQ=255)

                   tGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATa                                                                       <  1:2453791/93‑1 (MQ=255)

                   tGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATa                                                                       <  1:3922475/93‑1 (MQ=255)

                    gTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAg                                                                      <  1:6105392/93‑1 (MQ=255)

                    gTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAg                                                                      <  2:3556636/93‑1 (MQ=255)

                     ttttACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGc                                                                     <  1:349095/93‑1 (MQ=255)

                     ttttACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGc                                                                     <  1:1608997/93‑1 (MQ=255)

                       ttACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAg                                                                   >  2:4510280/1‑93 (MQ=255)

                           ggTTTTGGCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGc                                                               <  1:3155422/93‑1 (MQ=255)

                           ggTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGc                                                               <  2:5021420/93‑1 (MQ=255)

                           ggTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGc                                                               >  2:5676959/1‑93 (MQ=255)

                           ggTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGc                                                               >  1:164212/1‑93 (MQ=255)

                           ggTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGc                                                               <  1:3685867/93‑1 (MQ=255)

                             ttttGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCtt                                                             <  2:5456077/93‑1 (MQ=255)

                              tttGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCttt                                                            <  1:6252467/93‑1 (MQ=255)

                               ttGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCtttt                                                           <  2:2583372/93‑1 (MQ=255)

                               ttGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCtttt                                                           <  1:2972636/93‑1 (MQ=255)

                                 gCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTcc                                                         <  2:1348905/93‑1 (MQ=255)

                                 gCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTcc                                                         <  2:5163221/93‑1 (MQ=255)

                                 gCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTcc                                                         <  1:1880211/93‑1 (MQ=255)

                                  cccTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCg                                                        >  1:414024/1‑93 (MQ=255)

                                  cccTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCg                                                        >  2:1443996/1‑93 (MQ=255)

                                   ccTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCgg                                                       <  2:3049828/93‑1 (MQ=255)

                                   ccTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCgg                                                       >  2:4061750/1‑93 (MQ=255)

                                   ccTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCgg                                                       >  2:44948/1‑93 (MQ=255)

                                    cttcttGCATGTTGCTCCTCCTTAACACGCACTATCGAACCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGa                                                      <  2:4934486/93‑1 (MQ=255)

                                     ttcttGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGAt                                                     >  1:1396355/1‑93 (MQ=255)

                                      tcttGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATa                                                    >  1:425188/1‑93 (MQ=255)

                                      tcttGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATa                                                    <  1:6024547/93‑1 (MQ=255)

                                      tcttGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTGTCCGGATa                                                    <  2:6126902/93‑1 (MQ=255)

                                          gCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCaa                                                <  2:2051982/93‑1 (MQ=255)

                                          gCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCaa                                                >  2:6186925/1‑93 (MQ=255)

                                          gCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCaa                                                >  1:1438782/1‑93 (MQ=255)

                                          gCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCaa                                                <  1:5082877/93‑1 (MQ=255)

                                             tGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTa                                             >  2:224318/1‑93 (MQ=255)

                                              gTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTAt                                            >  2:3853706/1‑93 (MQ=255)

                                               ttGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATc                                           <  1:4667733/93‑1 (MQ=255)

                                               ttGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATc                                           <  2:4665062/93‑1 (MQ=255)

                                               ttGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATc                                           >  1:1715605/1‑93 (MQ=255)

                                                 gCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTa                                         <  2:3791515/93‑1 (MQ=255)

                                                   ttCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTaaa                                       <  1:5421595/93‑1 (MQ=255)

                                                    tctcCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAAc                                      <  1:3611898/93‑1 (MQ=255)

                                                      tcCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGt                                    <  2:1108657/93‑1 (MQ=255)

                                                        cTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTaa                                  >  1:1463813/1‑93 (MQ=255)

                                                         ttAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAac                                 <  2:5606700/93‑1 (MQ=255)

                                                         ttAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAac                                 >  1:2391386/1‑93 (MQ=255)

                                                          tAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAaca                                >  1:6292333/1‑93 (MQ=255)

                                                             cacGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACtt                             >  2:4979412/1‑93 (MQ=255)

                                                             cacGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACtt                             >  1:1013731/1‑93 (MQ=255)

                                                              ccGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTg                            <  1:6159198/92‑1 (MQ=255)

                                                              acGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTg                            >  2:3052190/1‑93 (MQ=255)

                                                                gcccTATCGATCCCCATGTTCGGGGGGAAAACGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGAc                          <  2:4092345/90‑1 (MQ=255)

                                                                gCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGAc                          <  1:2502647/93‑1 (MQ=255)

                                                                gCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGAc                          <  2:4577491/93‑1 (MQ=255)

                                                                 cACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACa                         >  2:2187168/1‑93 (MQ=255)

                                                                  aCTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACaa                        <  2:3303059/93‑1 (MQ=255)

                                                                   cTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAAc                       <  2:311408/93‑1 (MQ=255)

                                                                    tATCGATCCCCATGTTCGGGGGTAAAATGAGTCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACt                      <  2:5721209/93‑1 (MQ=255)

                                                                        gATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACtgtgt                  >  2:5097442/1‑93 (MQ=255)

                                                                        gATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACtgtgt                  <  2:2320169/93‑1 (MQ=255)

                                                                         aTCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACtgtgtg                 >  2:213743/1‑93 (MQ=255)

                                                                         aTCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACtgtgtg                 >  1:2229951/1‑93 (MQ=255)

                                                                         aTCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACtgtgtg                 >  2:3522113/1‑93 (MQ=255)

                                                                          tCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACTGTGTGa                <  1:4029553/93‑1 (MQ=255)

                                                                          tCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACTGTGTGa                >  1:1112162/1‑93 (MQ=255)

                                                                           ccccATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACTGTGTGAg               <  2:1680205/93‑1 (MQ=255)

                                                                             ccATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACTGTGTGAGGa             <  1:6005195/93‑1 (MQ=255)

                                                                             ccATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACTGTGTGAGGa             >  2:3707600/1‑93 (MQ=255)

                                                                             ccATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACTGTGTGAGGa             >  1:4330790/1‑93 (MQ=255)

                                                                               aTGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACTGTGTGAGGaaa           <  1:3717122/93‑1 (MQ=255)

                                                                                tGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACTGTGTGAGGaaaa          <  1:2614189/93‑1 (MQ=255)

                                                                                tGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACTGTGTGAGGaaaa          <  2:5387398/93‑1 (MQ=255)

                                                                                tGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACTGTGTGAGGaaaa          <  1:3355729/93‑1 (MQ=255)

                                                                                tGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACTGTGTGAGGaaaa          <  1:4947841/93‑1 (MQ=255)

                                                                                  ttCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACTGTGTGAGGAAAAGc        <  1:2222871/93‑1 (MQ=255)

                                                                                  ttCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACTGTGTGAGGAAAAGc        >  2:4252871/1‑93 (MQ=255)

                                                                                   tCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACTGTGTGAGGAAAAGCg       <  2:2400009/93‑1 (MQ=255)

                                                                                     ggggggAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACTGTGTGAGGAAAAGCGTa     <  2:1964699/93‑1 (MQ=255)

                                                                                      ggggGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACTGTGTGAGGAAAAGCGTAt    <  2:1241424/93‑1 (MQ=255)

                                                                                       ggggAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACTGTGTGAGGAAAAGCGTAtt   <  2:548832/93‑1 (MQ=255)

CGAGAATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGAAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACTGTGTGAGGAAAAGCGTATTT  >  NC_000913/160559‑160739

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`