BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,461,874	T→C	P104P (CCT→CCC)	b1399 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,461,874	0	T	C	100.0%	746.4 / NA	232	P104P (CCT→CCC)	b1399	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (121/111); total (121/111)

Only 100 of 239 total aligned reads displayed.

CATCGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCTGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGG  >  NC_000913/1461784‑1461963

 aTCGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCa                                                                                        <  1:494515/93‑1 (MQ=255)

  tCGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCAt                                                                                       >  1:1078869/1‑93 (MQ=255)

  tCGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCAt                                                                                       >  2:2908652/1‑93 (MQ=255)

   cGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATg                                                                                      <  1:2067913/93‑1 (MQ=255)

    gggCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATgg                                                                                     >  2:2528735/1‑93 (MQ=255)

    gggCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATgg                                                                                     <  2:4047816/93‑1 (MQ=255)

     ggCGACGCTGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATggg                                                                                    >  2:6135475/1‑93 (MQ=255)

     ggCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATggg                                                                                    >  2:1248124/1‑93 (MQ=255)

     ggCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATggg                                                                                    >  1:2340206/1‑93 (MQ=255)

      gCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCCGCGGAACCCGCATGGGa                                                                                   >  2:6245105/1‑93 (MQ=255)

      gCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGa                                                                                   >  2:2641327/1‑93 (MQ=255)

       cGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGAt                                                                                  <  1:654287/93‑1 (MQ=255)

          cGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGt                                                                               <  2:3477714/93‑1 (MQ=255)

            cAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTaa                                                                             >  2:3169761/1‑93 (MQ=255)

             aGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTaaa                                                                            >  2:2194660/1‑93 (MQ=255)

              gTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAAt                                                                           <  1:5717125/93‑1 (MQ=255)

                ttCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATgg                                                                         <  1:1123079/93‑1 (MQ=255)

                ttCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATgg                                                                         >  1:2979956/1‑93 (MQ=255)

                 tCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGc                                                                        <  1:5152347/93‑1 (MQ=255)

                   tataGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTc                                                                      <  2:1588849/93‑1 (MQ=255)

                    ataGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTcc                                                                     <  2:6191187/93‑1 (MQ=255)

                     taGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCt                                                                    >  1:3281256/1‑93 (MQ=255)

                      aGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTg                                                                   <  1:3679542/93‑1 (MQ=255)

                       gCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCCTGGGGTGGTAAATGGCTCCTGt                                                                  >  1:3806821/1‑93 (MQ=255)

                       gCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGt                                                                  >  1:1878666/1‑93 (MQ=255)

                       gCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGt                                                                  >  1:1006468/1‑93 (MQ=255)

                       gCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGt                                                                  <  1:2447431/93‑1 (MQ=255)

                       gCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGt                                                                  >  1:1619626/1‑93 (MQ=255)

                       gCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGt                                                                  <  1:389208/93‑1 (MQ=255)

                          tCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCTCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGc                                                               <  2:1286423/93‑1 (MQ=255)

                          tCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGc                                                               >  1:5558680/1‑93 (MQ=255)

                          tCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGc                                                               >  2:5261592/1‑93 (MQ=255)

                            aGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGctc                                                             <  2:2265124/93‑1 (MQ=255)

                             gTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGctct                                                            >  1:5649564/1‑93 (MQ=255)

                               gATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCg                                                          <  1:1388152/93‑1 (MQ=255)

                                aTAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCgg                                                         <  1:3589778/93‑1 (MQ=255)

                                 tAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCTGa                                                        >  2:5808053/1‑93 (MQ=255)

                                 tAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGa                                                        >  1:4056439/1‑93 (MQ=255)

                                  aaaGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGaa                                                       >  1:3076777/1‑93 (MQ=255)

                                   aaGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAg                                                      <  1:3326239/93‑1 (MQ=255)

                                   aaGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAg                                                      >  1:5771051/1‑93 (MQ=255)

                                   aaGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAg                                                      >  1:767651/1‑93 (MQ=255)

                                     ggCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCGTGTTGCTCTCGGAAGGt                                                    <  2:5994645/93‑1 (MQ=255)

                                      gCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGtt                                                   <  2:433204/93‑1 (MQ=255)

                                        ttGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTa                                                 <  1:2546802/93‑1 (MQ=255)

                                         tGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAg                                                >  2:4615733/1‑93 (MQ=255)

                                           cgcCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGAt                                              >  2:3494650/1‑93 (MQ=255)

                                            gcCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATa                                             <  1:843995/93‑1 (MQ=255)

                                             ccTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATaa                                            >  1:1699658/1‑93 (MQ=255)

                                             ccTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATaa                                            <  2:4472441/93‑1 (MQ=255)

                                             ccTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATaa                                            <  1:2308130/93‑1 (MQ=255)

                                              cTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATaaa                                           >  2:3922471/1‑93 (MQ=255)

                                              cTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATaaa                                           <  2:4660059/93‑1 (MQ=255)

                                                 aCGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCa                                        >  1:3959112/1‑93 (MQ=255)

                                                  cgcgACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCaa                                       <  2:4454785/93‑1 (MQ=255)

                                                  cgcgACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCaa                                       <  1:2605460/93‑1 (MQ=255)

                                                   gcgACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAAc                                      >  2:4962148/1‑93 (MQ=255)

                                                   gcgACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAAc                                      <  1:1465242/93‑1 (MQ=255)

                                                   gcgACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAAc                                      <  2:5951083/93‑1 (MQ=255)

                                                    cgACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACg                                     <  2:407793/93‑1 (MQ=255)

                                                     gACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACgc                                    >  1:437139/1‑93 (MQ=255)

                                                     gACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACgc                                    <  2:176102/93‑1 (MQ=255)

                                                      aCGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACgct                                   <  2:1965677/93‑1 (MQ=255)

                                                      aCGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACgct                                   <  1:4069309/93‑1 (MQ=255)

                                                       cGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACgctg                                  <  2:572462/93‑1 (MQ=255)

                                                         ggCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACgctggc                                >  2:2744841/1‑93 (MQ=255)

                                                            aGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGa                             >  2:4099296/1‑93 (MQ=255)

                                                            aGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGa                             <  1:2514767/93‑1 (MQ=255)

                                                             gAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGAt                            >  2:3646313/1‑93 (MQ=255)

                                                             gAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGAt                            <  2:6049730/93‑1 (MQ=255)

                                                             gAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGAt                            >  1:5879042/1‑93 (MQ=255)

                                                             gAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGAt                            >  1:3213161/1‑93 (MQ=255)

                                                             gAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGAt                            >  1:3884250/1‑93 (MQ=255)

                                                              aaaGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATg                           >  1:3041120/1‑93 (MQ=255)

                                                                 gTAAAATTTATCGCGCCGAGCAAACCGCCTGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATAAACGCTGGCTGATGTCa                        >  2:1169847/1‑93 (MQ=255)

                                                                  tAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCaa                       >  1:6180721/1‑93 (MQ=255)

                                                                    aaaTTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCaaaa                     >  1:4515356/1‑93 (MQ=255)

                                                                      aTTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAg                   <  1:1197878/93‑1 (MQ=255)

                                                                       tttATTGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGc                  <  1:3395949/93‑1 (MQ=255)

                                                                        ttATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCa                 <  2:5377089/93‑1 (MQ=255)

                                                                         tATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAg                <  1:4305111/93‑1 (MQ=255)

                                                                          aTCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGt               >  2:643741/1‑93 (MQ=255)

                                                                          aTCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGt               <  1:2908652/93‑1 (MQ=255)

                                                                           tCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGGTGATGTCAAAAAGCCGtt              >  1:5454643/1‑93 (MQ=255)

                                                                           tCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGtt              >  2:3134755/1‑93 (MQ=255)

                                                                           tCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGtt              >  2:2997252/1‑93 (MQ=255)

                                                                           tCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGtt              <  2:371172/93‑1 (MQ=255)

                                                                           tCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGtt              >  1:5534814/1‑93 (MQ=255)

                                                                               gcAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATc          <  1:5052228/93‑1 (MQ=255)

                                                                               gcAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATc          <  1:2665208/93‑1 (MQ=255)

                                                                               gcAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATc          >  1:4149144/1‑93 (MQ=255)

                                                                                cAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCt         >  2:5436482/1‑93 (MQ=255)

                                                                                cAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCt         <  1:2002087/93‑1 (MQ=255)

                                                                                  gagCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTgg       >  2:2712109/1‑93 (MQ=255)

                                                                                   agCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGc      >  2:576474/1‑93 (MQ=255)

                                                                                    gCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCa     <  1:4548073/93‑1 (MQ=255)

                                                                                     cAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCag    >  1:5819632/1‑92 (MQ=255)

                                                                                      aaCCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAg   <  2:5015409/93‑1 (MQ=255)

                                                                                       aCCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAgg  >  2:1051884/1‑93 (MQ=255)

                                                                                       aCCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAgg  >  1:5363066/1‑93 (MQ=255)

CATCGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCTGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGG  >  NC_000913/1461784‑1461963

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`