BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,464,084	T→C	intergenic (+999/+1861)	b1400 → / ← yi222	putative transferase/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,464,084	0	T	C	100.0%	787.4 / NA	241	intergenic (+999/+1861)	b1400/yi222	putative transferase/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (110/131); total (110/131)

Only 100 of 247 total aligned reads displayed.

TAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCA  >  NC_000913/1463994‑1464173

tAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGc                                                                                         >  2:3044174/1‑93 (MQ=255)

tAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGc                                                                                         <  1:4870805/93‑1 (MQ=255)

 aaCACTGTTGCCCTTGAAGGGGTGAGAGCAGATGGCGCAACGAAGTGGCAATATAATCCCAACGGTGAGCTTGTTATTACGGGTGATAACGcc                                                                                        >  2:1476584/1‑93 (MQ=255)

    acTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCcaca                                                                                     >  1:4018141/1‑93 (MQ=255)

    acTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCcaca                                                                                     <  2:2013279/93‑1 (MQ=255)

     cTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAg                                                                                    >  1:3794254/1‑93 (MQ=255)

     cTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAg                                                                                    <  2:6243865/93‑1 (MQ=255)

     cTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAg                                                                                    <  1:4173497/93‑1 (MQ=255)

       gTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTa                                                                                  >  1:1150375/1‑93 (MQ=255)

        ttGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTaa                                                                                 >  2:5452987/1‑93 (MQ=255)

          gCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTaaaa                                                                               >  2:1289219/1‑92 (MQ=255)

          gCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAaac                                                                               <  2:4915433/93‑1 (MQ=255)

             cTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAaacaac                                                                            <  2:2483994/93‑1 (MQ=255)

             cTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAaacaac                                                                            >  2:4602903/1‑93 (MQ=255)

              ttGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAacaaca                                                                           <  1:1775271/93‑1 (MQ=255)

              ttGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAacaaca                                                                           >  1:1477580/1‑93 (MQ=255)

               tGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAAcaacaa                                                                          <  1:170378/93‑1 (MQ=255)

               tGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAAcaacaa                                                                          <  1:3258715/93‑1 (MQ=255)

                gAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAAt                                                                         >  2:2963155/1‑93 (MQ=255)

                gAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAAt                                                                         <  2:1563205/93‑1 (MQ=255)

                gAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAAt                                                                         <  2:4819646/93‑1 (MQ=255)

                gAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAAt                                                                         >  1:278324/1‑93 (MQ=255)

                 aaGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATg                                                                        <  1:187993/93‑1 (MQ=255)

                 aaGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATg                                                                        <  1:3681380/93‑1 (MQ=255)

                  aGGGATGAGCACAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATgg                                                                       <  1:5289726/93‑1 (MQ=255)

                   ggggTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGc                                                                      >  1:588415/1‑93 (MQ=255)

                   ggggTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGc                                                                      >  1:3717820/1‑93 (MQ=255)

                   ggggTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGc                                                                      <  1:4054870/93‑1 (MQ=255)

                   ggggTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGc                                                                      <  2:2374056/93‑1 (MQ=255)

                      gTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCaaa                                                                   <  2:3626602/93‑1 (MQ=255)

                        gAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAac                                                                 >  2:1345685/1‑93 (MQ=255)

                           cgcAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAaccac                                                              <  1:3616400/93‑1 (MQ=255)

                            gcAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAaccacc                                                             >  2:178144/1‑93 (MQ=255)

                            gcAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAaccacc                                                             <  2:3864176/93‑1 (MQ=255)

                              aGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGt                                                           >  2:3850463/1‑93 (MQ=255)

                              aGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGt                                                           <  1:2263736/93‑1 (MQ=255)

                               gATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGtt                                                          <  1:2976081/93‑1 (MQ=255)

                                aTGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTg                                                         <  2:3444832/93‑1 (MQ=255)

                                aTGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTg                                                         >  1:1203403/1‑93 (MQ=255)

                                 tGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGa                                                        <  1:2762142/93‑1 (MQ=255)

                                 tGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGa                                                        >  1:2001463/1‑93 (MQ=255)

                                 tGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGa                                                        >  1:5510474/1‑93 (MQ=255)

                                  ggCGCAACGAAGTGGCAATGTAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGAc                                                       >  2:6083299/1‑93 (MQ=255)

                                  ggCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGAc                                                       <  2:2421684/93‑1 (MQ=255)

                                  ggCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGAc                                                       >  1:494516/1‑93 (MQ=255)

                                       aaCGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTaa                                                  >  2:5891749/1‑93 (MQ=255)

                                       aaCGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTaa                                                  >  1:958924/1‑93 (MQ=255)

                                          gAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGa                                               >  1:834955/1‑93 (MQ=255)

                                           aaGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGAt                                              >  2:3371160/1‑93 (MQ=255)

                                           aaGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGAt                                              >  1:5993197/1‑93 (MQ=255)

                                           aaGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGAt                                              <  2:5209711/93‑1 (MQ=255)

                                           aaGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGAt                                              <  1:3848524/93‑1 (MQ=255)

                                            aGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGAtt                                             <  1:4713019/93‑1 (MQ=255)

                                             gTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTc                                            <  1:5692231/93‑1 (MQ=255)

                                             gTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTc                                            >  1:5368747/1‑93 (MQ=255)

                                              tGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTcc                                           >  2:2508063/1‑93 (MQ=255)

                                              tGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTcc                                           >  1:294035/1‑93 (MQ=255)

                                              tGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTcc                                           <  1:5209465/93‑1 (MQ=255)

                                                gCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCAc                                         >  2:3726807/1‑93 (MQ=255)

                                                 cAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCAcc                                        <  2:4133590/93‑1 (MQ=255)

                                                 cAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCAcc                                        <  2:4449855/93‑1 (MQ=255)

                                                  aaTATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCg                                       >  1:6226821/1‑93 (MQ=255)

                                                  aaTATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCg                                       <  1:43156/93‑1 (MQ=255)

                                                   atatAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCgg                                      >  2:2843670/1‑93 (MQ=255)

                                                    tataATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGt                                     >  1:162366/1‑93 (MQ=255)

                                                    tataATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGt                                     >  2:1588395/1‑93 (MQ=255)

                                                    tataATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGt                                     >  1:2043904/1‑93 (MQ=255)

                                                      taATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTAc                                   <  1:129228/93‑1 (MQ=255)

                                                      taATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTAc                                   <  2:2112447/93‑1 (MQ=255)

                                                           acaACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGaaa                              >  1:2358231/1‑93 (MQ=255)

                                                              aCGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCa                           >  1:621397/1‑93 (MQ=255)

                                                               cGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCaa                          <  1:3169714/93‑1 (MQ=255)

                                                               cGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCaa                          <  2:4587971/93‑1 (MQ=255)

                                                                ggTGATCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAAc                         <  1:3394730/93‑1 (MQ=255)

                                                                ggTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAAc                         >  2:4693253/1‑93 (MQ=255)

                                                                ggTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAAc                         >  2:4186127/1‑93 (MQ=255)

                                                                 gTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACg                        <  2:285923/93‑1 (MQ=255)

                                                                 gTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACg                        >  2:5547501/1‑93 (MQ=255)

                                                                  tGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACgg                       >  1:3434650/1‑93 (MQ=255)

                                                                    aGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGta                     >  1:3994299/1‑93 (MQ=255)

                                                                     gCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGtaa                    <  1:2598321/93‑1 (MQ=255)

                                                                        tGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAATATTCCACCGGTACGGAAACCAACGGtaataa                 <  2:5041869/93‑1 (MQ=255)

                                                                        tGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGtaataa                 <  1:757131/93‑1 (MQ=255)

                                                                          ttattaCGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACg               <  2:6274799/93‑1 (MQ=255)

                                                                          ttattaCGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACg               >  1:4759091/1‑93 (MQ=255)

                                                                            attaCGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACggg             >  2:2075972/1‑93 (MQ=255)

                                                                               aCGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGaaa          <  2:3161388/93‑1 (MQ=255)

                                                                                cGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAg         <  1:1066201/93‑1 (MQ=255)

                                                                                cGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAg         <  2:5342801/93‑1 (MQ=255)

                                                                                 gggTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAgg        >  1:1239707/1‑92 (MQ=255)

                                                                                 gggTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGt        <  1:1720884/93‑1 (MQ=255)

                                                                                 gggTGATAACCCCACAGTAAACAACAATGGCAAACCCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGt        <  2:5168868/93‑1 (MQ=255)

                                                                                    tGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGAt     <  1:442857/93‑1 (MQ=255)

                                                                                    tGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGAt     <  1:1612366/93‑1 (MQ=255)

                                                                                      aTAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTc   <  2:1117817/93‑1 (MQ=255)

                                                                                      aTAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTc   <  2:5672463/93‑1 (MQ=255)

                                                                                       tAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCa  <  1:3872916/93‑1 (MQ=255)

                                                                                       tAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCa  <  1:31179/93‑1 (MQ=255)

                                                                                       tAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCa  >  2:3537351/1‑93 (MQ=255)

                                                                                       tAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCa  <  1:1492763/93‑1 (MQ=255)

TAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCA  >  NC_000913/1463994‑1464173

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`