Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,476,839 T→C V197A (GTC→GCC)  b1409 → putative phosphatidate cytidiltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,476,8390TC99.5% 577.3 / NA 182V197A (GTC→GCC) b1409putative phosphatidate cytidiltransferase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (107/74);  minor base A (1/0);  total (108/74)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 192 total aligned reads displayed.

GTTACTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGTCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGACCGTTAC  >  NC_000913/1476750‑1476928
                                                                                         |                                                                                         
gTTACTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGcccc                                                                                        >  1:146166/1‑93 (MQ=255)
gTTACTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGcccc                                                                                        >  1:71906/1‑93 (MQ=255)
 ttACTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCt                                                                                       >  1:2459627/1‑93 (MQ=255)
  tgcTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTa                                                                                      >  2:4267095/3‑93 (MQ=255)
  tACTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTa                                                                                      >  1:4395571/1‑93 (MQ=255)
  tACTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTa                                                                                      >  2:4821803/1‑93 (MQ=255)
  tACTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGACCCTa                                                                                      >  2:49248/1‑93 (MQ=255)
  tACTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCATGCGGCAGAAGAAAAGCGGCCCCTa                                                                                      >  1:6085915/1‑93 (MQ=255)
   aCTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTaa                                                                                     >  1:4008294/1‑93 (MQ=255)
    cTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTaaa                                                                                    >  1:6255384/1‑93 (MQ=255)
    cTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTaaa                                                                                    <  2:5122968/93‑1 (MQ=255)
     tGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAg                                                                                   >  1:4594881/1‑93 (MQ=255)
      ggTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGATGAAAAGTGGCCCCTAAAGt                                                                                  <  2:6129989/93‑1 (MQ=255)
      ggTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGt                                                                                  >  2:5884061/1‑93 (MQ=255)
      ggTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGt                                                                                  <  2:4942801/93‑1 (MQ=255)
      ggTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGt                                                                                  >  2:3676255/1‑93 (MQ=255)
       gtgtTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTc                                                                                 <  2:3184390/93‑1 (MQ=255)
       gtgtTATTTCTTGTGGCATGAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTc                                                                                 <  2:567457/93‑1 (MQ=255)
        tgtTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCa                                                                                >  2:2998624/1‑93 (MQ=255)
          ttATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGc                                                                              >  1:1209939/1‑93 (MQ=255)
           tATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGGAAAGTGGCCCCTAAAGTCAGcc                                                                             <  1:4991123/93‑1 (MQ=255)
           tATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGcc                                                                             >  1:1424013/1‑93 (MQ=255)
            aTTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGccc                                                                            <  2:281225/93‑1 (MQ=255)
             tttCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCg                                                                           <  2:4165108/93‑1 (MQ=255)
             tttCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCg                                                                           <  2:1755480/93‑1 (MQ=255)
             tttCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTAAGCCCg                                                                           >  2:3353316/1‑93 (MQ=255)
              ttCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCgg                                                                          <  1:4643277/93‑1 (MQ=255)
               tCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCggg                                                                         >  1:5545361/1‑93 (MQ=255)
               tCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCggg                                                                         <  2:3505950/93‑1 (MQ=255)
               tCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCggg                                                                         >  1:1713668/1‑93 (MQ=255)
                cTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCTTGCGGCAGAAGAAAAGTGGCCCCTAAAATCAGCCCGGGa                                                                        <  2:3000371/93‑1 (MQ=255)
                   ttGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGaaaa                                                                     >  1:2961703/1‑93 (MQ=255)
                   ttGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGaaaa                                                                     <  2:2418214/93‑1 (MQ=255)
                    tGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGaaaaa                                                                    >  1:2880446/1‑93 (MQ=255)
                     ggCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAAc                                                                   >  1:3755176/1‑93 (MQ=255)
                     ggCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAAc                                                                   >  2:2370648/1‑93 (MQ=255)
                      gCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACa                                                                  <  1:835221/93‑1 (MQ=255)
                      gCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACa                                                                  >  2:4320169/1‑93 (MQ=255)
                      gCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACa                                                                  <  2:6252786/93‑1 (MQ=255)
                        aTTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACAtt                                                                >  2:539505/1‑93 (MQ=255)
                        aTTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACAtt                                                                >  1:2453741/1‑93 (MQ=255)
                        aTTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACAtt                                                                >  1:2382072/1‑93 (MQ=255)
                        aTTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACAtt                                                                <  1:1947702/93‑1 (MQ=255)
                         ttAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTg                                                               <  1:1898129/93‑1 (MQ=255)
                           aaCCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGa                                                             >  2:5295126/1‑93 (MQ=255)
                            aCCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGaa                                                            >  2:3313184/1‑93 (MQ=255)
                            aCCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGaa                                                            <  2:802651/93‑1 (MQ=255)
                             ccGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAg                                                           >  1:1577535/1‑93 (MQ=255)
                              cGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAgg                                                          >  1:4279104/1‑93 (MQ=255)
                              cGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAgg                                                          >  1:4442526/1‑93 (MQ=255)
                              cGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAgg                                                          >  2:2197046/1‑93 (MQ=255)
                               gAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGt                                                         >  1:2617860/1‑93 (MQ=255)
                               gAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGt                                                         >  2:5037086/1‑93 (MQ=255)
                               gAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGt                                                         >  1:3671110/1‑93 (MQ=255)
                                aGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTc                                                        <  2:1934529/93‑1 (MQ=255)
                                 gTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCt                                                       <  2:3734432/93‑1 (MQ=255)
                                   cAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGa                                                     <  2:4293911/93‑1 (MQ=255)
                                   cAAACCATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGa                                                     <  2:2542255/93‑1 (MQ=255)
                                    aaaCGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGAt                                                    >  1:2791288/1‑93 (MQ=255)
                                    aaaCGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGAt                                                    <  1:5155188/93‑1 (MQ=255)
                                     aaCGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATg                                                   >  2:5494830/1‑93 (MQ=255)
                                     aaCGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATg                                                   >  1:93437/1‑93 (MQ=255)
                                      aCGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATgg                                                  >  1:4569048/1‑93 (MQ=255)
                                        gATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGggc                                                <  1:3937906/93‑1 (MQ=255)
                                          tatTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGggcgg                                              >  2:421352/1‑93 (MQ=255)
                                          tatTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGggcgg                                              >  2:4855028/1‑93 (MQ=255)
                                           atTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGggcggc                                             <  2:5738447/93‑1 (MQ=255)
                                           atTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGggcggc                                             >  1:200343/1‑93 (MQ=255)
                                           atTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGggcggc                                             >  2:6222799/1‑93 (MQ=255)
                                               cacaGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGtca                                         >  1:110111/1‑93 (MQ=255)
                                                acaGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGtcat                                        >  1:1754529/1‑93 (MQ=255)
                                                acaGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGtcat                                        >  2:2396491/1‑93 (MQ=255)
                                                acaGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGtcat                                        >  1:3726768/1‑93 (MQ=255)
                                                 caGTATTTATGGGGAATATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGtcatc                                       <  2:3419649/93‑1 (MQ=255)
                                                 caGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGtcatc                                       <  2:2015040/93‑1 (MQ=255)
                                                    tATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCAcc                                    >  1:4891432/1‑93 (MQ=255)
                                                     aTTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAATTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACca                                   >  2:56309/1‑93 (MQ=255)
                                                                 aagtcTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGTGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGt                       <  2:4895445/89‑1 (MQ=255)
                                                                 aaTCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGt                       <  1:4750143/93‑1 (MQ=255)
                                                                  aTCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTc                      <  2:3577941/93‑1 (MQ=255)
                                                                  aTCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTc                      <  1:3275875/93‑1 (MQ=255)
                                                                   tCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCa                     <  1:510149/93‑1 (MQ=255)
                                                                   tCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCa                     >  1:5251067/1‑93 (MQ=255)
                                                                    ccTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCAc                    >  2:4534491/1‑93 (MQ=255)
                                                                     cTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACt                   >  1:1873441/1‑93 (MQ=255)
                                                                     cTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACt                   <  1:4074949/93‑1 (MQ=255)
                                                                         ggCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGAtt               <  2:5844524/93‑1 (MQ=255)
                                                                         ggCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGAtt               <  2:4022952/93‑1 (MQ=255)
                                                                         ggCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGAtt               <  1:479094/93‑1 (MQ=255)
                                                                         ggCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGAtt               >  2:1157145/1‑93 (MQ=255)
                                                                          gCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTa              >  1:2830569/1‑93 (MQ=255)
                                                                           cAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTAt             <  2:1641905/93‑1 (MQ=255)
                                                                            agaagaAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATc            <  1:4074960/93‑1 (MQ=255)
                                                                            agaagaAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATc            <  1:5881473/93‑1 (MQ=255)
                                                                                gaaAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGAc        >  2:69852/1‑93 (MQ=255)
                                                                                   aaGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGACCGt     <  2:2378340/93‑1 (MQ=255)
                                                                                    aGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGACCGtt    >  1:6165494/1‑93 (MQ=255)
                                                                                    aGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGACCGtt    >  2:1131631/1‑93 (MQ=255)
                                                                                      tGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGACCGTTAc  <  2:397961/93‑1 (MQ=255)
                                                                                      tGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGACCGTTAc  <  2:1646321/93‑1 (MQ=255)
                                                                                         |                                                                                         
GTTACTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGTCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGACCGTTAC  >  NC_000913/1476750‑1476928

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: