BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,490,510	C→T	S6L (TCA→TTA)	trg →	methyl‑accepting chemotaxis protein III

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,490,510	0	C	T	100.0%	814.9 / NA	216	S6L (TCA→TTA)	trg	methyl‑accepting chemotaxis protein III
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (113/103); total (113/103)

Only 100 of 225 total aligned reads displayed.

TTTGGTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTCACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTAAGT  >  NC_000913/1490420‑1490598

tttGGTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTtac                                                                                        <  2:4609163/93‑1 (MQ=255)

 ttGGTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTtaca                                                                                       <  2:1404572/93‑1 (MQ=255)

 ttGGTCATAAGTAATTACCGTCAAGCGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTtaca                                                                                       <  1:6089375/93‑1 (MQ=255)

  tGGTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAg                                                                                      <  2:491739/93‑1 (MQ=255)

   tgTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGc                                                                                     <  1:2020414/92‑1 (MQ=255)

    gTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCg                                                                                    >  2:2163709/1‑93 (MQ=255)

    gTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCg                                                                                    >  2:5443871/1‑93 (MQ=255)

     tCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGa                                                                                   <  2:3518618/93‑1 (MQ=255)

      cATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGAt                                                                                  >  2:914450/1‑93 (MQ=255)

      cATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGAt                                                                                  >  2:5929925/1‑93 (MQ=255)

       aTAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGAtt                                                                                 >  1:750683/1‑93 (MQ=255)

        tAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTa                                                                                <  1:4456434/93‑1 (MQ=255)

        tAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTa                                                                                >  1:3423121/1‑93 (MQ=255)

        tAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTa                                                                                >  1:2433440/1‑93 (MQ=255)

         aaGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAg                                                                               <  2:5807732/93‑1 (MQ=255)

         aaGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAg                                                                               <  2:1671123/93‑1 (MQ=255)

         aaGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAg                                                                               <  2:4824650/93‑1 (MQ=255)

         aaGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAg                                                                               <  2:3857254/93‑1 (MQ=255)

         aaGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAg                                                                               >  1:4493296/1‑93 (MQ=255)

          aGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAgg                                                                              >  2:3392296/1‑93 (MQ=255)

           gTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGt                                                                             <  1:640806/93‑1 (MQ=255)

           gTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGt                                                                             >  2:6079389/1‑93 (MQ=255)

           gTAATCACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGGAACTAAGACAACTCCCTTACAGCGATTAGGt                                                                             >  1:6307656/1‑93 (MQ=255)

            tAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGtt                                                                            <  1:1213823/93‑1 (MQ=255)

            tAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGtt                                                                            >  2:5031613/1‑93 (MQ=255)

              aTTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGtttt                                                                          >  2:5156716/1‑93 (MQ=255)

               ttACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAGCCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGttttt                                                                         <  2:2689339/93‑1 (MQ=255)

               ttACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGttttt                                                                         <  1:2523401/93‑1 (MQ=255)

               ttACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGttttt                                                                         >  2:3118064/1‑93 (MQ=255)

               ttACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGttttt                                                                         >  1:3917239/1‑93 (MQ=255)

                tACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGtttttt                                                                        <  2:1954947/93‑1 (MQ=255)

                tACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGtttttt                                                                        <  2:778940/93‑1 (MQ=255)

                 aCCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTg                                                                       >  1:1178575/1‑93 (MQ=255)

                  ccGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGc                                                                      >  1:5677808/1‑93 (MQ=255)

                   cGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGca                                                                     <  1:3016261/93‑1 (MQ=255)

                    gTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGcat                                                                    <  2:3025224/93‑1 (MQ=255)

                    gTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGcat                                                                    >  1:5862383/1‑93 (MQ=255)

                          ggCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGcatcacatc                                                              <  1:1767559/92‑1 (MQ=255)

                           gCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGcatcacatca                                                             <  1:1024099/93‑1 (MQ=255)

                           gCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGcatcacatca                                                             <  1:4769460/93‑1 (MQ=255)

                            ccGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAg                                                            >  2:2325292/1‑93 (MQ=255)

                             cGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAgg                                                           >  1:5519842/1‑93 (MQ=255)

                              gATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAggt                                                          >  2:5239165/1‑93 (MQ=255)

                              gATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAggt                                                          <  2:2735468/93‑1 (MQ=255)

                               aTGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAggtt                                                         <  1:944928/93‑1 (MQ=255)

                               aTGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAggtt                                                         >  1:678079/1‑93 (MQ=255)

                               aTGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAggtt                                                         <  1:4625849/93‑1 (MQ=255)

                                tGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAggttg                                                        >  1:2242556/1‑93 (MQ=255)

                                tGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAggttg                                                        <  2:1267091/93‑1 (MQ=255)

                                 gACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAggttgg                                                       <  2:1498064/93‑1 (MQ=255)

                                  aCTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAggttggt                                                      <  1:822807/93‑1 (MQ=255)

                                  aCTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAggttggt                                                      <  2:742192/93‑1 (MQ=255)

                                    tttCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTc                                                    <  1:12925/93‑1 (MQ=255)

                                     ttCTATCAGGAGTAACCCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTcc                                                   <  2:4222247/93‑1 (MQ=255)

                                     ttCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTcc                                                   <  2:356817/93‑1 (MQ=255)

                                     ttCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGGTcc                                                   >  2:1062995/1‑93 (MQ=255)

                                     ttCTATCAGGAGCAAACCTGGACGAGAGACAACGGGAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTcc                                                   >  2:3638028/1‑93 (MQ=255)

                                       cTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGt                                                 <  1:2581067/93‑1 (MQ=255)

                                        tATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGtt                                                <  2:4782444/93‑1 (MQ=255)

                                         aTCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTa                                               <  1:5115722/93‑1 (MQ=255)

                                         aTCAGGAGTAAACCTGGACGAGAGACAACGGCAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGCTCCGTTa                                               >  2:3804789/1‑93 (MQ=255)

                                          tCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTAt                                              >  1:2347133/1‑93 (MQ=255)

                                           cAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTAtt                                             >  1:5017809/1‑93 (MQ=255)

                                            aGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTAttt                                            <  1:1555392/93‑1 (MQ=255)

                                                gTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTACGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCt                                        <  1:4552879/93‑1 (MQ=255)

                                                gTAAACCTGGACGACAGACAACGGTAATGAATACAACTCCCTTACAGCGATTTGGTTTCTTGCATCACATCAGGTTGGTTCCGTTATTTGTCt                                        >  2:804002/1‑93 (MQ=255)

                                                 tAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTg                                       <  1:3714230/93‑1 (MQ=255)

                                                   aaCCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCa                                     <  2:1302013/93‑1 (MQ=255)

                                                    aCCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCAt                                    >  2:1159071/1‑93 (MQ=255)

                                                    aCCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCAt                                    >  2:55285/1‑93 (MQ=255)

                                                      cTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTc                                  >  1:1047249/1‑93 (MQ=255)

                                                      cTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTc                                  >  2:2116191/1‑93 (MQ=255)

                                                      cTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTc                                  <  2:4015914/93‑1 (MQ=255)

                                                       tGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCt                                 >  1:4039867/1‑93 (MQ=255)

                                                       tGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCt                                 >  2:155458/1‑93 (MQ=255)

                                                        ggACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTa                                >  1:31798/1‑93 (MQ=255)

                                                         gACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAg                               <  1:1835309/93‑1 (MQ=255)

                                                         gACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAg                               >  1:3371022/1‑93 (MQ=255)

                                                           cGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGc                             >  2:2487103/1‑93 (MQ=255)

                                                           cGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGc                             <  2:5288537/93‑1 (MQ=255)

                                                            gagagaCAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCg                            <  2:5712842/93‑1 (MQ=255)

                                                               agaCAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTa                         <  2:4729738/93‑1 (MQ=255)

                                                               agaCAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTa                         >  1:1602218/1‑93 (MQ=255)

                                                                gaCAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTAt                        <  2:3709985/93‑1 (MQ=255)

                                                                  cAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCt                      <  1:4015788/93‑1 (MQ=255)

                                                                  cAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCt                      <  1:5692291/93‑1 (MQ=255)

                                                                   aaCGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCtt                     >  2:3329415/1‑93 (MQ=255)

                                                                    aCGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTa                    >  1:3608837/1‑93 (MQ=255)

                                                                    aCGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTa                    >  2:6170190/1‑93 (MQ=255)

                                                                      ggTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGt                  <  1:5991809/93‑1 (MQ=255)

                                                                         aaTGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCt               >  2:4178209/1‑93 (MQ=255)

                                                                         aaTGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCt               >  1:3097905/1‑93 (MQ=255)

                                                                           tGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTAt             >  2:1850122/1‑93 (MQ=255)

                                                                             aaTACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTc           >  1:5160168/1‑93 (MQ=255)

                                                                                aCAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCa        <  1:5460823/93‑1 (MQ=255)

                                                                                 cAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCAt       <  1:3517059/93‑1 (MQ=255)

                                                                                  aaCTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCAtt      >  1:1538416/1‑93 (MQ=255)

                                                                                  aaCTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCAtt      <  1:6151631/93‑1 (MQ=255)

                                                                                     tCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTAAg   >  2:546453/1‑93 (MQ=255)

                                                                                     tCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTAAg   <  1:3299559/93‑1 (MQ=255)

TTTGGTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTCACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTAAGT  >  NC_000913/1490420‑1490598

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`