BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,493,567	T→C	F86L (TTT→CTT)	b1423 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,493,567	0	T	C	100.0%	583.7 / NA	184	F86L (TTT→CTT)	b1423	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (96/88); total (96/88)

Only 100 of 192 total aligned reads displayed.

AATGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGTTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATTGAT  >  NC_000913/1493477‑1493656

aaTGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGctt                                                                                         <  2:1760999/93‑1 (MQ=255)

 aTGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTg                                                                                        <  2:1710573/93‑1 (MQ=255)

 aTGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTg                                                                                        >  2:2462576/1‑93 (MQ=255)

  tGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGc                                                                                       <  1:4807868/93‑1 (MQ=255)

  tGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGc                                                                                       <  2:1869340/93‑1 (MQ=255)

      gACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCAtt                                                                                   >  1:2898946/1‑93 (MQ=255)

      gACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCAtt                                                                                   >  2:1377398/1‑93 (MQ=255)

       aCGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTa                                                                                  <  1:201731/93‑1 (MQ=255)

        cGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTAt                                                                                 >  2:217796/1‑93 (MQ=255)

         gAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATg                                                                                <  2:5838671/93‑1 (MQ=255)

           gCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATggg                                                                              >  2:472138/1‑93 (MQ=255)

           gCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATggg                                                                              <  1:4284100/93‑1 (MQ=255)

             tGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGa                                                                            >  1:1880867/1‑93 (MQ=255)

             tGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGa                                                                            <  1:574420/93‑1 (MQ=255)

                 gcgACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTa                                                                        >  1:2338745/1‑93 (MQ=255)

                   gACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTAcc                                                                      <  2:630824/93‑1 (MQ=255)

                    aCTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTAccc                                                                     >  2:1007124/1‑93 (MQ=255)

                     cTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCg                                                                    <  2:6070395/93‑1 (MQ=255)

                     cTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCg                                                                    <  2:908341/93‑1 (MQ=255)

                      tGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCgg                                                                   >  2:2429897/1‑93 (MQ=255)

                      tGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCgg                                                                   >  2:5471695/1‑93 (MQ=255)

                       gAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGt                                                                  <  1:697311/93‑1 (MQ=255)

                        aaTGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTg                                                                 >  2:3534612/1‑93 (MQ=255)

                           gTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGc                                                              <  1:5175653/93‑1 (MQ=255)

                                aCGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTa                                                         >  1:1017765/1‑93 (MQ=255)

                                aCGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTa                                                         <  2:6036045/93‑1 (MQ=255)

                                 cGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTAc                                                        <  1:4705127/93‑1 (MQ=255)

                                 cGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTAc                                                        <  2:5649556/93‑1 (MQ=255)

                                  gTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACg                                                       >  2:3388482/1‑93 (MQ=255)

                                   tCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACgt                                                      <  1:1727272/93‑2 (MQ=255)

                                   tCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGa                                                      <  2:1493831/93‑1 (MQ=255)

                                   tCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGa                                                      <  2:2873341/93‑1 (MQ=255)

                                   tCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGa                                                      >  2:4576280/1‑93 (MQ=255)

                                    cATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGAt                                                     <  1:2584719/93‑1 (MQ=255)

                                    cATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGAt                                                     >  2:5173057/1‑93 (MQ=255)

                                     aTGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGAtc                                                    >  1:3081525/1‑93 (MQ=255)

                                     aTGGGGCGATGCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGAtc                                                    <  2:5465893/93‑1 (MQ=255)

                                       ggggCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGAtctc                                                  >  1:1398876/1‑93 (MQ=255)

                                        gggCGATTCGCGTTGGGACTGCACAAGAGCTTGCAACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGAtctct                                                 <  1:1917656/93‑1 (MQ=255)

                                         ggCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGAtctctc                                                <  2:4653894/93‑1 (MQ=255)

                                            gATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCgca                                             <  1:4339057/93‑1 (MQ=255)

                                            gATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCgca                                             <  2:16076/93‑1 (MQ=255)

                                             aTTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCgcag                                            >  1:6202634/1‑93 (MQ=255)

                                             aTTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCgcag                                            >  1:2151688/1‑93 (MQ=255)

                                              ttCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCgcagg                                           >  2:4107401/1‑93 (MQ=255)

                                                cgcgTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCgcaggca                                         <  1:455427/93‑1 (MQ=255)

                                                cgcgTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCgcaggca                                         <  1:1624827/93‑1 (MQ=255)

                                                 gcgTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCgcaggcag                                        >  2:5504672/1‑93 (MQ=255)

                                                 gcgTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCgcaggcag                                        <  1:531840/93‑1 (MQ=255)

                                                  cgTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGcaggcagg                                       <  2:2997254/93‑1 (MQ=255)

                                                  cgTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGcaggcagg                                       <  2:5689750/93‑1 (MQ=255)

                                                   gTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAggg                                      <  1:2226705/93‑1 (MQ=255)

                                                   gTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAggg                                      <  2:3068022/93‑1 (MQ=255)

                                                    ttGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAgggg                                     >  1:3914273/1‑93 (MQ=255)

                                                    ttGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAgggg                                     >  1:1182840/1‑93 (MQ=255)

                                                      gggACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTg                                   >  1:3198426/1‑93 (MQ=255)

                                                        gACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGcc                                 >  1:102382/1‑93 (MQ=255)

                                                         aCTGCACAAGAGCTTGCTGCTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCg                                <  1:1251518/93‑1 (MQ=255)

                                                         aCTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCg                                >  1:4627944/1‑93 (MQ=255)

                                                          cTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCgg                               >  2:2620234/1‑93 (MQ=255)

                                                          cTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCgg                               <  2:6008044/93‑1 (MQ=255)

                                                          cTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCgg                               <  1:4307529/93‑1 (MQ=255)

                                                           tGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCggc                              >  2:3647639/1‑92 (MQ=255)

                                                           tGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGt                              >  1:5505374/1‑93 (MQ=255)

                                                            gCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGCGTGCCGGTa                             >  2:3402100/1‑93 (MQ=255)

                                                              acaAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACa                           >  2:5065896/1‑93 (MQ=255)

                                                              acaAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACa                           <  1:4867980/93‑1 (MQ=255)

                                                              acaAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACa                           >  2:3759868/1‑93 (MQ=255)

                                                               caAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACAt                          >  2:4754010/1‑93 (MQ=255)

                                                                aaGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACAtt                         <  2:140440/93‑1 (MQ=255)

                                                                aaGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACAtt                         <  2:3265473/93‑1 (MQ=255)

                                                                 agagCTTGCTACTCTTCGGCGGATTCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTc                        <  2:4929571/93‑1 (MQ=255)

                                                                 agagCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTc                        <  1:3772279/93‑1 (MQ=255)

                                                                 agagCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTc                        >  1:3329958/1‑93 (MQ=255)

                                                                  gagCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCg                       <  1:2391400/93‑1 (MQ=255)

                                                                    gCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGAc                     <  2:4259258/93‑1 (MQ=255)

                                                                    gCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGAc                     <  2:272308/93‑1 (MQ=255)

                                                                    gCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGAc                     <  1:2663909/93‑1 (MQ=255)

                                                                     cTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACa                    <  2:3091187/93‑1 (MQ=255)

                                                                        gCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCa                 >  2:4505264/1‑93 (MQ=255)

                                                                        gCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCa                 >  1:5372077/1‑93 (MQ=255)

                                                                         cTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCAt                >  2:2817036/1‑93 (MQ=255)

                                                                          tACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCAtt               >  1:3971233/1‑93 (MQ=255)

                                                                           aCTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCAttt              >  1:3495740/1‑93 (MQ=255)

                                                                           aCTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCAttt              >  2:1328413/1‑93 (MQ=255)

                                                                            ctctTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTc             <  2:2023848/93‑1 (MQ=255)

                                                                             tctTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCg            >  2:2213578/1‑93 (MQ=255)

                                                                             tctTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCg            <  2:3477886/93‑1 (MQ=255)

                                                                               ttCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGc          >  2:5396848/1‑93 (MQ=255)

                                                                               ttCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGc          >  2:1262902/1‑93 (MQ=255)

                                                                                 cggcggATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGccc        >  2:4437394/1‑93 (MQ=255)

                                                                                   gcggATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCAt      >  2:5432805/1‑93 (MQ=255)

                                                                                    cggATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCAtt     <  2:5768422/93‑1 (MQ=255)

                                                                                     ggATGCTTGCCATTATGGGGATGTACCCTGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATtg    <  2:2078575/93‑1 (MQ=255)

                                                                                     ggATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATtg    >  2:4429215/1‑93 (MQ=255)

                                                                                      gATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATtga   >  1:1814476/1‑93 (MQ=255)

                                                                                      gATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATtga   >  1:2847410/1‑93 (MQ=255)

                                                                                      gATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATtga   <  1:3791737/93‑1 (MQ=255)

                                                                                      gATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGAGGTGCCGGTACATTCGACAGCATTTCGGCCCATtga   >  2:5735031/1‑93 (MQ=255)

                                                                                       aTGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATtgat  <  1:5847091/93‑1 (MQ=255)

AATGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGTTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATTGAT  >  NC_000913/1493477‑1493656

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`