BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,503,660	T→C	T149A (ACG→GCG)	b1433 ←	putative membrane transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,503,660	0	T	C	100.0%	670.0 / NA	205	T149A (ACG→GCG)	b1433	putative membrane transport protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (95/110); total (95/110)

Only 100 of 208 total aligned reads displayed.

CGATCCCAATAATCATCGCGGCAATTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGTAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGCATTGCCGCCGCAAGCGAGTGCGGAATAA  >  NC_000913/1503570‑1503749

cgatcCCAATAATCATCGCGGCAATTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCaa                                                                                         <  2:3685411/93‑1 (MQ=255)

 gatcCCAATAATCATCGCGGCAATTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCaaa                                                                                        >  2:460333/1‑93 (MQ=255)

 gatcCCAATAATCATCGCGGCAATTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCaaa                                                                                        <  2:2331226/93‑1 (MQ=255)

 gatcCCAATAATCATCGCGGCAATTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCaaa                                                                                        <  1:5841810/93‑1 (MQ=255)

    cccAATAATCATCGCGGCAATTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTg                                                                                     <  1:282256/93‑1 (MQ=255)

     ccAATAATCATCGCGGCAATTACCGCATAGCGCGGGGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGa                                                                                    >  2:3415831/1‑93 (MQ=255)

     ccAATAATCATCGCGGCAATTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGa                                                                                    >  1:4366003/1‑93 (MQ=255)

     ccAATAATCATCGCGGCAATTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGa                                                                                    >  2:614179/1‑93 (MQ=255)

      cAATAATCATCGCGGCAATTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGAc                                                                                   <  1:5711315/93‑1 (MQ=255)

      cAATAATCATCGCGGCAATTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGAc                                                                                   <  2:717644/93‑1 (MQ=255)

       aataatCATCGCGGCAATTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGAcc                                                                                  <  2:4320254/93‑1 (MQ=255)

        ataatCATCGCGGCAATTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCg                                                                                 <  1:941142/93‑1 (MQ=255)

        ataatCATCGCGGCAATTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCg                                                                                 <  1:1870882/93‑1 (MQ=255)

        ataatCATCGCGGCAATTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCg                                                                                 >  1:3563872/1‑93 (MQ=255)

           atcatcGCGGCAATTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTcc                                                                              <  1:3937119/93‑1 (MQ=255)

           atcatcGCGGCAATTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTcc                                                                              <  1:2631069/93‑1 (MQ=255)

           atcatcGCGGCAATTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACAAGCAACATACTTCCACACAACGCAAATTGACCGTcc                                                                              >  1:5258673/1‑93 (MQ=255)

            tcatcGCGGCAATTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCa                                                                             <  1:3971950/93‑1 (MQ=255)

             catcGCGGCAATTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAg                                                                            <  2:250815/93‑1 (MQ=255)

              atcGCGGCAATTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTGCACACAACGCAAATTGACCGTCCAGa                                                                           >  2:5092146/1‑93 (MQ=255)

              atcGCGGCAATTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGa                                                                           >  1:4161119/1‑93 (MQ=255)

               tcGCGGCAATTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGAc                                                                          >  1:2788874/1‑93 (MQ=255)

                cgcgGCAATTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACt                                                                         <  1:3738243/93‑1 (MQ=255)

                cgcgGCAATTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACt                                                                         <  2:11240/93‑1 (MQ=255)

                 gcgGCCATTACCGAATAGCGCTGCGCACCGGGCTTGGGTGCCAGCCATACCAGCAACATACTTCCAATCAACGCAAATTGACAGACCAgtgtg                                                                        >  2:2461648/1‑89 (MQ=255)

                 gcgGCAATTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTg                                                                        >  1:3109036/1‑93 (MQ=255)

                  cgGCAATTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTgg                                                                       <  1:5613193/93‑1 (MQ=255)

                   ggCAATTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGc                                                                      >  2:3004101/1‑93 (MQ=255)

                      aaTTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCaaa                                                                   <  2:82624/93‑1 (MQ=255)

                      aaTTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCaaa                                                                   <  2:408885/93‑1 (MQ=255)

                       aTTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAAc                                                                  <  2:2419543/93‑1 (MQ=255)

                          aCCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGcc                                                               <  2:3853912/93‑1 (MQ=255)

                          aCCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGcc                                                               >  1:5468517/1‑93 (MQ=255)

                           ccGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCt                                                              >  2:4276414/1‑93 (MQ=255)

                           ccGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCt                                                              <  1:728035/93‑1 (MQ=255)

                            cGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTg                                                             <  1:4615308/93‑1 (MQ=255)

                             gCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCACATTGACCGTCCAGACTGGCAAACGCCTGt                                                            >  1:4523923/1‑93 (MQ=255)

                             gCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGt                                                            >  1:348417/1‑93 (MQ=255)

                             gCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGt                                                            >  2:4211620/1‑93 (MQ=255)

                              cATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTa                                                           <  1:1080556/93‑1 (MQ=255)

                              cATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTa                                                           >  2:2378368/1‑93 (MQ=255)

                              cATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTa                                                           >  1:3395332/1‑93 (MQ=255)

                               aTAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTaa                                                          >  1:3320217/1‑93 (MQ=255)

                                tAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTaaa                                                         <  1:2191419/93‑1 (MQ=255)

                                 aGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAAc                                                        <  2:4768820/93‑1 (MQ=255)

                                    gcggcgCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCaa                                                     <  1:1645528/93‑1 (MQ=255)

                                    gcggcgCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCaa                                                     >  2:2626450/1‑93 (MQ=255)

                                     cggcgCACCGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACTCCTGTAAACCaaa                                                    <  2:6194498/93‑1 (MQ=255)

                                     cggcgCACCGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCaaa                                                    <  1:511132/93‑1 (MQ=255)

                                     cggcgCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCaaa                                                    >  1:580748/1‑93 (MQ=255)

                                      ggcgCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAg                                                   <  2:1776851/93‑1 (MQ=255)

                                       gcgcAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGc                                                  <  1:3598277/93‑1 (MQ=255)

                                        cgcAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCg                                                 <  1:3017581/93‑1 (MQ=255)

                                         gcAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGt                                                >  1:2927113/1‑93 (MQ=255)

                                          cAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGta                                               >  1:231613/1‑93 (MQ=255)

                                           aaCGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGtaa                                              <  1:1194526/93‑1 (MQ=255)

                                           aaCGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGtaa                                              >  1:4096938/1‑93 (MQ=255)

                                            aCGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGtaat                                             >  1:808993/1‑93 (MQ=255)

                                            aCGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGtaat                                             >  2:4702599/1‑93 (MQ=255)

                                             cGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGtaata                                            >  1:4752181/1‑93 (MQ=255)

                                                 cTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAAt                                        >  1:2043986/1‑93 (MQ=255)

                                                 cTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAAt                                        >  1:6087413/1‑93 (MQ=255)

                                                 cTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAAt                                        >  1:3654308/1‑93 (MQ=255)

                                                     gTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCg                                    >  1:1844167/1‑93 (MQ=255)

                                                     gTTGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCg                                    >  2:5313642/1‑93 (MQ=255)

                                                      ttGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCgg                                   >  1:2438120/1‑93 (MQ=255)

                                                      ttGCCAGCCATACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCgg                                   <  2:289722/93‑1 (MQ=255)

                                                         ccagccaTACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCaa                                >  2:4064954/1‑93 (MQ=255)

                                                           agccaTACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGc                              >  2:1411134/1‑93 (MQ=255)

                                                           agccaTACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGc                              <  2:213410/93‑1 (MQ=255)

                                                            gccaTACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGCa                             <  1:5996397/93‑1 (MQ=255)

                                                            gccaTACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGCa                             <  1:200873/93‑1 (MQ=255)

                                                            gccaTACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCCGCAAGCa                             >  1:188886/1‑93 (MQ=255)

                                                              caTACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGCAtt                           <  1:5931934/93‑1 (MQ=255)

                                                               aTACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGCATTg                          <  2:1965621/93‑1 (MQ=255)

                                                                tACCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGCATTgc                         >  2:2493364/1‑93 (MQ=255)

                                                                 aCCAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGCATTgcc                        >  1:3249871/1‑93 (MQ=255)

                                                                  ccAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGCATTgccg                       <  2:3283168/93‑1 (MQ=255)

                                                                  ccAGCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGCATTgccg                       >  2:5638603/1‑93 (MQ=255)

                                                                     gCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGCATTGccgccg                    >  2:2814617/1‑93 (MQ=255)

                                                                     gCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGCATTGccgccg                    >  2:128230/1‑93 (MQ=255)

                                                                     gCAACATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGCATTGccgccg                    >  2:3391881/1‑93 (MQ=255)

                                                                       aaCATACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGCATTGCCGCCGCa                  >  2:5688556/1‑93 (MQ=255)

                                                                          aTACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGCATTGCCGCCGCAAGc               >  1:4939554/1‑93 (MQ=255)

                                                                           tACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCTGCAAGCATTGCCGCCGCAAGCg              >  1:6110410/1‑93 (MQ=255)

                                                                           tACTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGCATTGCCGCCGCAAGCg              <  1:4200030/93‑1 (MQ=255)

                                                                             cTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGCATTGCCGCCGCAAGCGAg            <  2:3761225/93‑1 (MQ=255)

                                                                             cTTCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGCATTGCCGCCGCAAGCGAg            <  1:3427271/93‑1 (MQ=255)

                                                                               tCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGCATTGCCGCCGCAAGCGAGTg          >  2:4937538/1‑93 (MQ=255)

                                                                               tCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGCATTGCCGCCGCAAGCGAGTg          >  1:5422692/1‑93 (MQ=255)

                                                                               tCCACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGCATTGCCGCCGCAAGCGAGTg          >  1:1372675/1‑93 (MQ=255)

                                                                                ccACACAACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGGAAGCCATGCCGCCGCCAGCGAgggg         >  2:4407130/1‑90 (MQ=255)

                                                                                 cacacaACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGCATTGCCGCCGCAAGCGAGTGCg        >  1:5560732/1‑93 (MQ=255)

                                                                                 cacacaACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGCATTGCCGCCGCAAGCGAGTGCg        <  1:2358532/93‑1 (MQ=255)

                                                                                  acacaACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGCATTGCCGCCGCAAGCGAGTGCgg       >  2:396230/1‑93 (MQ=255)

                                                                                  acacaACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGCATTGCCGCCGCAAGCGAGTGCgg       >  2:3154478/1‑93 (MQ=255)

                                                                                    acaACGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGCATTGCCGCCGCAAGCGAGTGCGGaa     <  2:5860551/93‑1 (MQ=255)

                                                                                      aaCGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGCATTGCCGCCGCAAGCGAGTGCGGaata   >  1:6235754/1‑93 (MQ=255)

                                                                                       aCGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCTAGCATTGCCGCCGCAAGCGAGTGCGGaataa  <  2:5039246/93‑1 (MQ=255)

                                                                                       aCGCAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGCATTGCCGCCGCAAGCGAGTGCGGaataa  <  2:908966/93‑1 (MQ=255)

CGATCCCAATAATCATCGCGGCAATTACCGCATAGCGCGGCGCAACGGCCTTGGTTGCCAGCCATACCAGCAACATACTTCCACACAACGTAAATTGACCGTCCAGACTGGCAAACGCCTGTAAACCAAAGCGTAATAAAATCCCGGCAAGCATTGCCGCCGCAAGCGAGTGCGGAATAA  >  NC_000913/1503570‑1503749

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`