BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,511,995	G→A	S47S (TCG→TCA)	b1442 →	putative transport system permease protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,511,995	0	G	A	100.0%	792.0 / NA	215	S47S (TCG→TCA)	b1442	putative transport system permease protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (108/107); total (108/107)

Only 100 of 236 total aligned reads displayed.

GTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGC  >  NC_000913/1511905‑1512084

gtCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCact                                                                                         >  2:544976/1‑93 (MQ=255)

 tCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCactg                                                                                        >  2:5111664/1‑93 (MQ=255)

  ccGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCactgc                                                                                       >  1:5795141/1‑93 (MQ=255)

  ccGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCactgc                                                                                       <  2:4628580/93‑1 (MQ=255)

  ccGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCactgc                                                                                       <  2:4877417/93‑1 (MQ=255)

   cGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCtctgct                                                                                      <  2:6309435/93‑1 (MQ=255)

   cGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCactgct                                                                                      <  2:1307537/93‑1 (MQ=255)

    ggTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCActgctg                                                                                     >  1:4358610/1‑93 (MQ=255)

    ggTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCActgctg                                                                                     <  1:3315196/93‑1 (MQ=255)

     gTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGa                                                                                    <  2:509/93‑1 (MQ=255)

      tttCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGac                                                                                   <  1:4925498/93‑1 (MQ=255)

       ttcttcTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGaca                                                                                  <  2:3438755/93‑1 (MQ=255)

        tcttctGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGacac                                                                                 <  1:4412483/93‑1 (MQ=255)

         cttctGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACt                                                                                >  1:551825/1‑93 (MQ=255)

          ttctGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTg                                                                               >  2:1813497/1‑93 (MQ=255)

           tctGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGt                                                                              <  2:5986577/93‑1 (MQ=255)

            ctGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGtt                                                                             <  2:3653538/93‑1 (MQ=255)

             tGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTa                                                                            <  1:2164262/93‑1 (MQ=255)

             tGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTa                                                                            <  2:6269596/93‑1 (MQ=255)

             tGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTa                                                                            <  2:4730973/93‑1 (MQ=255)

               gCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATg                                                                          <  2:5333602/93‑1 (MQ=255)

                cATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATgg                                                                         >  1:3991003/1‑93 (MQ=255)

                  tAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCa                                                                       >  1:3087501/1‑93 (MQ=255)

                   aaTCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAg                                                                      <  1:3464385/93‑1 (MQ=255)

                    aTCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAgg                                                                     <  2:4658263/93‑1 (MQ=255)

                    aTCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAgg                                                                     <  2:48179/93‑1 (MQ=255)

                    aTCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAgg                                                                     >  2:3924481/1‑93 (MQ=255)

                      ccGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGa                                                                   >  2:1422894/1‑93 (MQ=255)

                        ggggctggggctGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGAtt                                                                 <  2:3373622/93‑1 (MQ=255)

                           gctggggctgTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGGGTTta                                                              >  2:4320707/1‑93 (MQ=255)

                           gctggggctgTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTta                                                              <  2:2205795/93‑1 (MQ=255)

                           gctggggctgTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTta                                                              <  1:4508751/93‑1 (MQ=255)

                            ctggggctgTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTtat                                                             <  1:3492394/93‑1 (MQ=255)

                            ctggggctgTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTtat                                                             <  2:2700178/93‑1 (MQ=255)

                             tggggctgTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGGTTTtata                                                            >  1:427699/1‑93 (MQ=255)

                             tggggctgTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTtatt                                                            >  1:1845833/1‑92 (MQ=255)

                              ggggctgTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTtatat                                                           >  1:2400952/1‑92 (MQ=255)

                               gggctgTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGGTTTTTTACt                                                          >  1:6291905/1‑93 (MQ=255)

                               gggctgTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACt                                                          <  1:6250815/93‑1 (MQ=255)

                                 gctgTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGGTTTTATACttt                                                        >  2:5537357/1‑93 (MQ=255)

                                 gctgTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACttt                                                        <  2:3311146/93‑1 (MQ=255)

                                 gctgTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACttt                                                        <  2:4547716/93‑1 (MQ=255)

                                  ctgTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACtttt                                                       <  1:6030967/93‑1 (MQ=255)

                                  ctgTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACtttt                                                       <  2:1666701/93‑1 (MQ=255)

                                  ctgTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACtttt                                                       <  1:670697/93‑1 (MQ=255)

                                   tgTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTTTACttttt                                                      >  2:573716/1‑92 (MQ=255)

                                    gTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGa                                                     <  1:2933212/93‑1 (MQ=255)

                                    gTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGa                                                     <  1:2595112/93‑1 (MQ=255)

                                     tttttACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGCATTTTTACCTTTgcc                                                    >  1:3749618/1‑91 (MQ=255)

                                     tttttACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGAc                                                    <  1:1903696/93‑1 (MQ=255)

                                       tttACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGa                                                  <  2:3488411/93‑1 (MQ=255)

                                         tACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGAtt                                                <  2:4758067/93‑1 (MQ=255)

                                          aCTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGAttt                                               >  2:1919672/1‑93 (MQ=255)

                                          aCTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGAttt                                               <  2:670387/93‑1 (MQ=255)

                                          aCTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGAttt                                               >  1:704385/1‑93 (MQ=255)

                                           ctgctgCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTc                                              <  1:472637/93‑1 (MQ=255)

                                           ctgctgCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTc                                              <  1:2075447/93‑1 (MQ=255)

                                             gctgctTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGGTTTTATACTTTTTACGATTTCAc                                            >  1:1399586/1‑93 (MQ=255)

                                              ctgctTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCAcc                                           <  1:919232/93‑1 (MQ=255)

                                               tgctTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCa                                          <  1:5830737/93‑1 (MQ=255)

                                                gctTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCAt                                         >  2:5489431/1‑93 (MQ=255)

                                                  ttGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGGTTTTATACTTTTGACGATTTCACCATGt                                       >  1:2997906/1‑93 (MQ=255)

                                                  ttGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGt                                       >  1:3043125/1‑93 (MQ=255)

                                                  ttGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGt                                       <  1:1324458/93‑1 (MQ=255)

                                                   tGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGGTTTTTTACTTTTGACGATTTCCCCATGtt                                      >  1:3409753/1‑92 (MQ=255)

                                                   tGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTTACGATTTCAACATGTc                                      >  1:3531600/1‑93 (MQ=255)

                                                     gCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCgg                                    >  2:2052727/1‑93 (MQ=255)

                                                         gCTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAAc                                >  1:5251912/1‑93 (MQ=255)

                                                          cTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGGTTTTATACTTTTGACGATTTCCCCATGTCGGTAACg                               >  2:1720014/1‑93 (MQ=255)

                                                          cTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTTACCATGTCGGTAACg                               >  1:1046337/1‑93 (MQ=255)

                                                          cTAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACg                               <  2:4348678/93‑1 (MQ=255)

                                                           tAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGGTTTTATACTTTTGACGATTTCACCATGTCGGTAACGc                              >  1:1210361/1‑93 (MQ=255)

                                                           tAATGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCCACATGTCGGTAAAGc                              >  2:5264529/1‑93 (MQ=255)

                                                            actgtgGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGcc                             <  2:2336339/91‑1 (MQ=255)

                                                            aaTGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGGTTTTATACTTTTGACGATTTTACCATGTCGGTAACGcc                             >  1:6216779/1‑93 (MQ=255)

                                                            aaTGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGcc                             <  1:302779/93‑1 (MQ=255)

                                                             aTGTGGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAAAGCCg                            >  1:2766850/1‑93 (MQ=255)

                                                              tgtgGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCgg                           >  2:5064986/1‑93 (MQ=255)

                                                              tgtgGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCgg                           >  2:4222178/1‑93 (MQ=255)

                                                                tgGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGaa                         <  2:786383/93‑1 (MQ=255)

                                                                tgGTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGaa                         <  2:3756931/93‑1 (MQ=255)

                                                                 ggTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAAc                        <  1:3392217/93‑1 (MQ=255)

                                                                  gTTTGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGGTTTTATACTTTTGACGATTTTACCATGTCTGTAACGCCGGAACt                       >  2:5681735/1‑93 (MQ=255)

                                                                     tGGCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGAc                    <  1:1813497/93‑1 (MQ=255)

                                                                       gCATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAAATAACGc                  >  2:306427/1‑93 (MQ=255)

                                                                       gCATTGTCTATTTCGGCTCACTGCTGACACTGTGATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGc                  <  2:2514279/93‑1 (MQ=255)

                                                                        cATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCt                 <  2:1656495/93‑1 (MQ=255)

                                                                        cATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCt                 <  1:1974972/93‑1 (MQ=255)

                                                                        cATTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCt                 >  1:2460545/1‑93 (MQ=255)

                                                                         aTTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTg                <  1:2581846/93‑1 (MQ=255)

                                                                         aTTGTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGAGTTTATTCTTTTGACGATTTTACCATGTCGGGAACGGCGGGAATGACGCTg                >  1:5604308/1‑93 (MQ=255)

                                                                            gTCTATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCg             >  2:86258/1‑93 (MQ=255)

                                                                               tATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAat          >  1:3188771/1‑93 (MQ=255)

                                                                               tATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAat          <  2:2256699/93‑1 (MQ=255)

                                                                               tATTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAat          >  2:2735595/1‑93 (MQ=255)

                                                                                aTTTCGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAata         >  1:3284198/1‑93 (MQ=255)

                                                                                    cGGCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCCTGTCGGTAACGCCGGAACTGACGCTGGCGGATATCCg     >  1:1424103/1‑93 (MQ=255)

                                                                                     ggCTCACTGCTGACACTGTTATGGCAGGGGTTTTATACTTTTGACGATTTTACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGt    >  2:4432983/1‑93 (MQ=255)

                                                                                     ggCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGt    <  1:5111664/93‑1 (MQ=255)

                                                                                     ggCTCACTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGt    >  1:1624706/1‑93 (MQ=255)

GTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGC  >  NC_000913/1511905‑1512084

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`