BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,531,361	T→C	H188R (CAT→CGT)	b1462 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,531,361	0	T	C	100.0%	601.7 / NA	185	H188R (CAT→CGT)	b1462	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (110/75); total (110/75)

Only 100 of 192 total aligned reads displayed.

GCTTTGATAAAGAAACC‑TGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGATGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGCCAAAC  >  NC_000913/1531271‑1531450

gCTTTGATAAAGAAACC‑TGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGc                                                                                         >  2:3540671/1‑93 (MQ=255)

  tttGATAAAGAAACC‑TGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCaa                                                                                       >  1:5681389/1‑93 (MQ=255)

  tttGATAAAGAAACC‑TGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCaa                                                                                       >  1:5241708/1‑93 (MQ=255)

      aTAAAGAAACC‑TGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTa                                                                                   >  2:1193491/1‑93 (MQ=255)

       aaaaaaaACCGTGTTT‑AAACCATAAATCCTCACCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTa                                                                                   <  1:2977054/92‑1 (MQ=255)

        aaaGAAACC‑TGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTAtt                                                                                 >  1:5972957/1‑93 (MQ=255)

        aaaGAAACC‑TGGTT‑ATAGCATGAATGCTTAACCCGCCATAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTAtt                                                                                 >  2:2070005/1‑93 (MQ=255)

          aaaaaCC‑TTGTTAAAAGAATAAATCCTAACCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTg                                                                                <  2:4335867/91‑1 (MQ=255)

           gAAACC‑TGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAg                                                                              >  2:3430826/1‑93 (MQ=255)

           gAAACC‑TGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAg                                                                              >  2:5941727/1‑93 (MQ=255)

             aaCC‑TGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCt                                                                            >  2:4885955/1‑93 (MQ=255)

                  tGGTT‑ATAGCATGACTCCTCACCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTatc                                                                        <  1:4890996/93‑1 (MQ=255)

                  tGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTatc                                                                        >  2:666278/1‑93 (MQ=255)

                    ttt‑ATAGTATAAATGCTCACCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTatcat                                                                      <  1:849142/92‑1 (MQ=255)

                      t‑ataGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTatcatca                                                                    >  2:1464175/1‑93 (MQ=255)

                      t‑ataGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTatcatca                                                                    >  1:768209/1‑93 (MQ=255)

                           gCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCaa                                                                >  1:4025393/1‑93 (MQ=255)

                            cATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCaaa                                                               >  1:1965445/1‑93 (MQ=255)

                             agaaaTGCTAACCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAAc                                                              <  2:439511/90‑1 (MQ=255)

                             aTGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAAc                                                              >  2:3617368/1‑93 (MQ=255)

                             aTGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAAc                                                              >  2:299944/1‑93 (MQ=255)

                              tGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACt                                                             >  1:4287886/1‑93 (MQ=255)

                              tGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACt                                                             >  1:4988425/1‑93 (MQ=255)

                               gAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTg                                                            >  2:350174/1‑93 (MQ=255)

                                aaTGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGc                                                           >  2:3755214/1‑93 (MQ=255)

                                  tGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCa                                                         >  2:762412/1‑93 (MQ=255)

                                  tGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCa                                                         >  1:5539374/1‑93 (MQ=255)

                                    cTTCACCCGCCGTAACACGTTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGc                                                       <  2:1040560/93‑1 (MQ=255)

                                    cTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGc                                                       >  1:5726382/1‑93 (MQ=255)

                                      aaccccGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCgg                                                     <  1:1437799/90‑1 (MQ=255)

                                       aaCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGc                                                    >  2:121031/1‑93 (MQ=255)

                                        ccccGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGcc                                                   <  2:2787782/92‑1 (MQ=255)

                                        ccccGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGcc                                                   <  1:2390383/92‑1 (MQ=255)

                                         cccGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCt                                                  <  1:1207819/93‑1 (MQ=255)

                                          cagccgTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCtt                                                 <  2:3512170/91‑1 (MQ=255)

                                           ctccgTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTc                                                <  1:2421561/91‑1 (MQ=255)

                                            gccgTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCg                                               >  2:5885026/1‑93 (MQ=255)

                                            gccgTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCg                                               <  2:5773666/93‑1 (MQ=255)

                                             ccgTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGa                                              >  2:71420/1‑93 (MQ=255)

                                              cgTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGAc                                             >  1:466434/1‑93 (MQ=255)

                                               gTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACa                                            >  2:3112483/1‑93 (MQ=255)

                                               gTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACa                                            >  2:2930780/1‑93 (MQ=255)

                                               gTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACa                                            <  1:2332226/93‑1 (MQ=255)

                                                tAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACaa                                           <  2:4782861/93‑1 (MQ=255)

                                                 aaCACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACaaa                                          <  1:4523477/93‑1 (MQ=255)

                                                 aaCACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACaaa                                          <  2:2657803/93‑1 (MQ=255)

                                                  acacGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAAt                                         >  2:2247146/1‑93 (MQ=255)

                                                     cGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATAcc                                      <  1:3490748/93‑1 (MQ=255)

                                                     cGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATAcc                                      <  2:6049434/93‑1 (MQ=255)

                                                      gCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATAccc                                     <  2:3387598/93‑1 (MQ=255)

                                                       cTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGTCAGCGGCCTTCGACAAATACCCg                                    >  1:2776142/1‑93 (MQ=255)

                                                       cTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCg                                    <  1:227004/93‑1 (MQ=255)

                                                        ttGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGt                                   <  1:1322410/93‑1 (MQ=255)

                                                        ttGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGt                                   >  1:5878835/1‑93 (MQ=255)

                                                         tGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTg                                  <  2:1731650/93‑1 (MQ=255)

                                                         tGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTg                                  <  2:1791884/93‑1 (MQ=255)

                                                          gcggCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGc                                 <  2:1111130/90‑1 (MQ=255)

                                                          gCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGc                                 >  1:6304784/1‑93 (MQ=255)

                                                             gCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTc                              <  1:1016577/93‑1 (MQ=255)

                                                              cTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCt                             <  1:4192984/93‑1 (MQ=255)

                                                                  tAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCg                         <  1:6202785/93‑1 (MQ=255)

                                                                    aCAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCgct                       <  2:2881132/93‑1 (MQ=255)

                                                                      aaaCGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCgctgc                     >  2:3789745/1‑93 (MQ=255)

                                                                      aaaCGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCgctgc                     >  1:6078004/1‑93 (MQ=255)

                                                                      aaaCGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCgctgc                     <  1:5739574/93‑1 (MQ=255)

                                                                      aaaCGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCgctgc                     >  1:2180823/1‑93 (MQ=255)

                                                                      aaaCATCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCgctgc                     <  1:5344421/93‑1 (MQ=255)

                                                                       aaCGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCgctgct                    <  2:447928/93‑1 (MQ=255)

                                                                       aaCGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCgctgct                    >  1:2260968/1‑93 (MQ=255)

                                                                         cGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGa                  <  2:3892346/93‑1 (MQ=255)

                                                                          gTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAt                 >  1:1947044/1‑93 (MQ=255)

                                                                           tCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAta                >  1:936647/1‑93 (MQ=255)

                                                                           tCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAta                <  1:1860112/93‑1 (MQ=255)

                                                                            cccAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAtac               <  2:26022/93‑1 (MQ=255)

                                                                            cccAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAtac               <  1:2089525/93‑1 (MQ=255)

                                                                             ccAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAtact              >  2:4616419/1‑93 (MQ=255)

                                                                              cAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAtacta             >  2:544651/1‑93 (MQ=255)

                                                                              cAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAtacta             <  1:2032520/93‑1 (MQ=255)

                                                                              cAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAtacta             >  2:5562567/1‑93 (MQ=255)

                                                                               aGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAtactac            >  2:5801354/1‑93 (MQ=255)

                                                                                gCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATactact           >  2:2806768/1‑93 (MQ=255)

                                                                                gCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATactact           >  2:4376541/1‑93 (MQ=255)

                                                                                gCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATactact           <  2:5043388/93‑1 (MQ=255)

                                                                                 cACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACtt          <  1:5298386/93‑1 (MQ=255)

                                                                                  aCCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTc         >  2:936048/1‑93 (MQ=255)

                                                                                  aCCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTc         >  2:2830558/1‑93 (MQ=255)

                                                                                  aCCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTc         <  2:1533841/93‑1 (MQ=255)

                                                                                   ccTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCg        >  2:3667292/1‑93 (MQ=255)

                                                                                   ccTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCg        >  1:3235843/1‑93 (MQ=255)

                                                                                   ccTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCg        >  1:1117526/1‑93 (MQ=255)

                                                                                   ccTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCg        >  1:1031696/1‑93 (MQ=255)

                                                                                    cTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGc       <  1:3407383/93‑1 (MQ=255)

                                                                                     tAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGcc      >  2:1878005/1‑93 (MQ=255)

                                                                                     tAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGcc      >  1:43282/1‑93 (MQ=255)

                                                                                       aaTGACGCAACGTATTGAGCTTGTCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCgtcca    >  2:3281765/1‑89 (MQ=255)

                                                                                       aaTGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGCCaa    >  1:4836896/1‑93 (MQ=255)

                                                                                        atgacgCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGCCaaa   <  2:4240599/93‑1 (MQ=255)

                                                                                        atgacgCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGCCaaa   >  2:5348290/1‑93 (MQ=255)

                                                                                        atgacgCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGCCaaa   >  1:3619876/1‑93 (MQ=255)

                                                                                         tgacgCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGCCAAAc  >  1:5433178/1‑93 (MQ=255)

GCTTTGATAAAGAAACC‑TGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGATGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGCCAAAC  >  NC_000913/1531271‑1531450

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`