BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,531,834	A→G	R30R (CGT→CGC)	b1462 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,531,834	0	A	G	100.0%	608.1 / NA	191	R30R (CGT→CGC)	b1462	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (79/112); total (79/112)

Only 100 of 197 total aligned reads displayed.

CGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGTTTTTTTAAGCGTAGTCCGTAACGCAA  >  NC_000913/1531744‑1531923

 ggtaTTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCgg                                                                                        >  2:1693677/4‑93 (MQ=255)

 ggCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCgg                                                                                        <  2:5577118/93‑1 (MQ=255)

  gCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAggcggc                                                                                       >  1:1162615/1‑93 (MQ=255)

  gCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAggcggc                                                                                       <  1:85492/93‑1 (MQ=255)

    aTTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTg                                                                                     <  1:2559671/93‑1 (MQ=255)

     ttGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTgg                                                                                    >  1:881890/1‑93 (MQ=255)

     ttGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTgg                                                                                    >  2:4715641/1‑93 (MQ=255)

       gACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCa                                                                                  >  2:1354993/1‑93 (MQ=255)

       gACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCa                                                                                  >  2:158323/1‑93 (MQ=255)

        aCCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCAt                                                                                 <  1:4606583/93‑1 (MQ=255)

        aCCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCAt                                                                                 >  1:1685295/1‑93 (MQ=255)

            ggCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGgtg                                                                             <  2:3048422/93‑1 (MQ=255)

               tGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTaa                                                                          <  2:2564045/93‑1 (MQ=255)

               tGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTaa                                                                          >  1:4050013/1‑93 (MQ=255)

                gCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAAt                                                                         >  1:2790527/1‑93 (MQ=255)

                gCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAAt                                                                         <  2:2060207/93‑1 (MQ=255)

                   gCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCt                                                                      >  1:5538463/1‑93 (MQ=255)

                       tAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTTTAATTCTATgg                                                                  <  2:2692965/93‑1 (MQ=255)

                       tAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATgg                                                                  >  1:2417949/1‑93 (MQ=255)

                       tAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATgg                                                                  >  1:451438/1‑93 (MQ=255)

                       tAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATgg                                                                  >  1:1083669/1‑93 (MQ=255)

                       tAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGGGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGGGTAATTCTATgg                                                                  >  1:2985801/1‑93 (MQ=255)

                       tAATGCTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGCCCGTTGGACCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATgg                                                                  <  1:6131067/93‑1 (MQ=255)

                        aaTGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATggg                                                                 >  1:1215350/1‑93 (MQ=255)

                          tGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGa                                                               >  1:2760244/1‑93 (MQ=255)

                           gTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGAt                                                              <  2:3702121/93‑1 (MQ=255)

                             tACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGa                                                            <  1:4837303/93‑1 (MQ=255)

                             tACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGa                                                            <  1:4537206/93‑1 (MQ=255)

                             tACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGa                                                            >  2:3634706/1‑93 (MQ=255)

                             tACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGa                                                            <  2:2270687/93‑1 (MQ=255)

                              aCGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGaa                                                           >  1:434295/1‑93 (MQ=255)

                              aCGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGaa                                                           <  2:4080356/93‑1 (MQ=255)

                                gccgcTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATc                                                         <  2:5142501/93‑1 (MQ=255)

                                gccgcTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATc                                                         >  2:487841/1‑93 (MQ=255)

                                  cgcTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCgg                                                       >  2:4896256/1‑93 (MQ=255)

                                   gcTGGGATTGCTCATCGAAGCTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGc                                                      <  2:1801132/93‑1 (MQ=255)

                                   gcTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGc                                                      >  2:1218981/1‑93 (MQ=255)

                                      gggATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCa                                                   >  2:1275550/1‑93 (MQ=255)

                                      gggATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCa                                                   <  2:3798763/93‑1 (MQ=255)

                                        gATTGCTCATCGAAACTGGCGATCAAGACCGTTGGGCCAAGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCCTg                                                 >  2:198257/1‑93 (MQ=255)

                                         aTTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATgg                                                <  1:3552837/93‑1 (MQ=255)

                                          ttGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGt                                               <  1:352758/93‑1 (MQ=255)

                                           tGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTa                                              >  1:5702330/1‑93 (MQ=255)

                                           tGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTa                                              >  1:767604/1‑93 (MQ=255)

                                             cTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATc                                            >  1:3028561/1‑93 (MQ=255)

                                              tCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCg                                           >  1:2834717/1‑93 (MQ=255)

                                                 tCGAAACTGGTGATCAAGTCTGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCt                                        <  1:2101460/93‑1 (MQ=255)

                                                  cGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTc                                       <  1:1868081/93‑1 (MQ=255)

                                                  cGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTc                                       <  2:5357295/93‑1 (MQ=255)

                                                   gAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTcg                                      >  2:2650311/1‑93 (MQ=255)

                                                   gAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTcg                                      <  2:1916763/93‑1 (MQ=255)

                                                    aaaCTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTcgc                                     >  1:4927119/1‑93 (MQ=255)

                                                    aaaCTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTcgc                                     <  2:3543920/93‑1 (MQ=255)

                                                    aaaCTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTcgc                                     >  2:5595945/1‑93 (MQ=255)

                                                    aaaCTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTcgc                                     <  1:3228925/93‑1 (MQ=255)

                                                     aaCTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTcgcg                                    >  1:679342/1‑93 (MQ=255)

                                                      aCTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCga                                   <  2:5305093/93‑1 (MQ=255)

                                                       cTGTTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCgaa                                  <  2:5998949/93‑1 (MQ=255)

                                                       cTGGTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCgaa                                  <  1:5766041/93‑1 (MQ=255)

                                                         ggTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCgaaga                                <  1:2315011/93‑1 (MQ=255)

                                                         ggTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCgaaga                                <  2:3535792/93‑1 (MQ=255)

                                                          gTGATCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCgaagaa                               <  2:1594022/93‑1 (MQ=255)

                                                             aTCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGt                            <  2:4532333/93‑1 (MQ=255)

                                                             aTCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGt                            <  2:751863/93‑1 (MQ=255)

                                                             aTCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGt                            <  1:4764808/93‑1 (MQ=255)

                                                              tCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGtt                           >  1:3858004/1‑93 (MQ=255)

                                                              tCAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGtt                           <  2:1446232/93‑1 (MQ=255)

                                                               cAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGttt                          <  1:1309682/93‑1 (MQ=255)

                                                               cAAGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGttt                          <  2:5982044/93‑1 (MQ=255)

                                                                aaGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGtttt                         <  2:252354/93‑1 (MQ=255)

                                                                 agtccGTTGGGCAATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGttttt                        <  1:5292578/90‑1 (MQ=255)

                                                                 aGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGttttt                        >  1:5638119/1‑93 (MQ=255)

                                                                 aGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGttttt                        <  2:4401639/93‑1 (MQ=255)

                                                                 aGACCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGttttt                        <  1:1577183/93‑1 (MQ=255)

                                                                   aCCGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGttttttt                      >  1:4095556/1‑93 (MQ=255)

                                                                     cGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGTTTTTTTaa                    <  2:3207407/93‑1 (MQ=255)

                                                                     cGTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGTTTTTTTaa                    >  2:5893454/1‑93 (MQ=255)

                                                                      gTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGTTTTTTTAAg                   >  1:1602860/1‑93 (MQ=255)

                                                                      gTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGTTTTTTTAAg                   <  2:461365/93‑1 (MQ=255)

                                                                      gTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGTTTTTTTAAg                   <  1:3463298/93‑1 (MQ=255)

                                                                      gTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGTTTTTTTAAg                   >  2:4090978/1‑93 (MQ=255)

                                                                      gTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGTTTTTTTAAg                   >  2:3122805/1‑93 (MQ=255)

                                                                      gTTGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGTTTTTTTAAg                   <  1:3675655/93‑1 (MQ=255)

                                                                       ttGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGTTTTTTTAAGc                  <  2:4171547/93‑1 (MQ=255)

                                                                        tGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGTTTTTTTAAGCg                 <  2:3855297/93‑1 (MQ=255)

                                                                        tGGGCCATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGTTTTTTTAAGCg                 <  1:4273070/93‑1 (MQ=255)

                                                                          ggCCATGATTAAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGTTTTTTTAAGCGTa               <  1:2149487/93‑1 (MQ=255)

                                                                             cATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGTTTTTTTAAGCGTAGTc            >  2:4237725/1‑93 (MQ=255)

                                                                             cATGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGGTTTTTTAAGCGTAGTc            >  1:2181377/1‑93 (MQ=255)

                                                                              aTGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGTTTTTTTAAGCGTAGTcc           >  1:5096746/1‑93 (MQ=255)

                                                                               tGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGTTTTTTTAAGCGTAGTCCg          <  1:1318620/93‑1 (MQ=255)

                                                                               tGATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGTTTTTTTAAGCGTAGTCCg          >  2:4813713/1‑93 (MQ=255)

                                                                                gATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATTGGATCGCCTCGCCAAGAAGGTTTTTTTAAACGTAGTCCGt         >  2:334437/1‑93 (MQ=255)

                                                                                gATTTAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGTTTTTTTAAGCGTAGTCCGt         <  2:5454136/93‑1 (MQ=255)

                                                                                  tttAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGTTTTTTTAAGCGTAGTCCGTaa       <  2:5398270/93‑1 (MQ=255)

                                                                                  tttAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGTTTTTTTAAGCGTAGTCCGTaa       <  2:4662013/93‑1 (MQ=255)

                                                                                  tttAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGTTTTTTTAAGCGTAGTCCGTaa       <  1:2926560/93‑1 (MQ=255)

                                                                                   ttAACAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGTTTTTTTAAGCGTAGTCCGTAAc      >  1:722748/1‑93 (MQ=255)

                                                                                       cAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGTTTTTTTAAGCGTAGTCCGTAACGCaa  <  1:1398200/93‑1 (MQ=255)

                                                                                       cAGGCGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGTTTTTTTAAGCGTAGTCCGTAACGCaa  >  2:862841/1‑93 (MQ=255)

CGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGTATCGCCTCGCGAAGAAGGTTTTTTTAAGCGTAGTCCGTAACGCAA  >  NC_000913/1531744‑1531923

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`