BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,533,519	T→C	T122A (ACG→GCG)	yddE ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,533,519	0	T	C	100.0%	750.1 / NA	233	T122A (ACG→GCG)	yddE	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (111/122); total (111/122)

Only 100 of 239 total aligned reads displayed.

AGCCTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGTACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGATCGTGC  >  NC_000913/1533429‑1533608

aGCCTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCAc                                                                                         <  1:4852770/93‑1 (MQ=255)

aGCCTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCAc                                                                                         >  1:3706638/1‑93 (MQ=255)

 gCCTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCAcc                                                                                        >  1:2787589/1‑93 (MQ=255)

 gCCTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCAcc                                                                                        >  1:4848721/1‑93 (MQ=255)

  ccTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCt                                                                                       <  1:3018395/93‑1 (MQ=255)

  ccTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCt                                                                                       <  1:5336449/93‑1 (MQ=255)

   cTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCtt                                                                                      >  2:4122344/1‑93 (MQ=255)

   cTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCtt                                                                                      >  2:700872/1‑93 (MQ=255)

     ggCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGt                                                                                    <  1:1474931/93‑1 (MQ=255)

      gCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGtt                                                                                   >  2:542594/1‑93 (MQ=255)

       cAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTc                                                                                  >  2:1757466/1‑93 (MQ=255)

        aGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTcc                                                                                 <  2:5355692/93‑1 (MQ=255)

         gAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCa                                                                                >  2:1469572/1‑93 (MQ=255)

         gAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCa                                                                                <  2:940741/93‑1 (MQ=255)

          aaTATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAg                                                                               >  1:4767007/1‑93 (MQ=255)

           atatCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGc                                                                              >  2:1361604/1‑93 (MQ=255)

           atatCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGc                                                                              <  1:5738322/93‑1 (MQ=255)

           atatCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGc                                                                              >  2:5265512/1‑93 (MQ=255)

            tatCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCg                                                                             >  1:3531376/1‑93 (MQ=255)

            tatCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCg                                                                             <  2:1709259/93‑1 (MQ=255)

            tatCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCg                                                                             >  2:26244/1‑93 (MQ=255)

            tatCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCg                                                                             >  2:1257262/1‑93 (MQ=255)

             atCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGa                                                                            <  1:720453/93‑1 (MQ=255)

              tCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGaa                                                                           >  1:4103851/1‑93 (MQ=255)

               cGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGaaa                                                                          >  2:5214660/1‑93 (MQ=255)

                gTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAAt                                                                         <  1:5583532/93‑1 (MQ=255)

                cgccTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAAt                                                                         <  2:5078967/91‑1 (MQ=255)

                 tCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATa                                                                        >  1:2589683/1‑93 (MQ=255)

                 tCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATa                                                                        <  1:4356069/93‑1 (MQ=255)

                  ccTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATAc                                                                       >  1:4621244/1‑93 (MQ=255)

                      aGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATa                                                                   <  1:940742/93‑1 (MQ=255)

                        tGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAat                                                                 <  2:204204/93‑1 (MQ=255)

                          agaTGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAatca                                                               <  1:4012638/93‑1 (MQ=255)

                           gaTGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAatcat                                                              >  1:4384996/1‑93 (MQ=255)

                           gaTGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAatcat                                                              >  2:2020269/1‑93 (MQ=255)

                           gaTGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAatcat                                                              >  1:357284/1‑93 (MQ=255)

                            aTGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAatcatc                                                             <  2:3502775/93‑1 (MQ=255)

                            aTGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAatcatc                                                             <  2:4534935/93‑1 (MQ=255)

                             tGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCg                                                            >  2:569251/1‑93 (MQ=255)

                              gAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGt                                                           <  2:2309052/93‑1 (MQ=255)

                              gAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGt                                                           >  1:4177616/1‑93 (MQ=255)

                               aaGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGtt                                                          <  1:3182335/93‑1 (MQ=255)

                               aaGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGtt                                                          <  2:4745870/93‑1 (MQ=255)

                                 gcgcGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTtgt                                                        <  1:2154704/93‑1 (MQ=255)

                                 gcgcGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTtgt                                                        >  2:6208846/1‑93 (MQ=255)

                                  cgcgTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTtgtg                                                       >  2:3658690/1‑93 (MQ=255)

                                   gcgTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTtgtgt                                                      >  1:1214402/1‑92 (MQ=255)

                                   gcgTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGc                                                      <  2:1836778/93‑1 (MQ=255)

                                    cgTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCt                                                     <  1:3682952/93‑1 (MQ=255)

                                      ttGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCttt                                                   <  1:5257420/93‑1 (MQ=255)

                                      ttGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCttt                                                   >  1:2864043/1‑93 (MQ=255)

                                        gATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTc                                                 <  2:42037/93‑1 (MQ=255)

                                        gATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTc                                                 <  1:5304651/93‑1 (MQ=255)

                                        gATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTc                                                 >  1:4476653/1‑93 (MQ=255)

                                        gATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTc                                                 >  1:3490062/1‑93 (MQ=255)

                                        gATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTc                                                 <  2:5888137/93‑1 (MQ=255)

                                           aaTCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGAt                                              <  1:1564439/93‑1 (MQ=255)

                                           aaTCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGAt                                              >  1:5608654/1‑93 (MQ=255)

                                            aTCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATa                                             >  2:3249334/1‑93 (MQ=255)

                                            aTCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATa                                             <  2:256101/93‑1 (MQ=255)

                                             tCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAg                                            <  2:49162/93‑1 (MQ=255)

                                               cccgcACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAgcc                                          <  1:1776859/92‑3 (MQ=255)

                                                ccgcACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCa                                         <  2:4428031/93‑1 (MQ=255)

                                                ccgcACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCa                                         <  2:1648784/93‑1 (MQ=255)

                                                ccgcACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCa                                         <  1:1015770/93‑1 (MQ=255)

                                                 cgcACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCAc                                        <  2:243565/93‑1 (MQ=255)

                                                  gcACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCAcg                                       <  2:2870387/93‑1 (MQ=255)

                                                  gcACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCAcg                                       >  2:838171/1‑93 (MQ=255)

                                                   cACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCAcgc                                      <  2:2249231/93‑1 (MQ=255)

                                                   cACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCAcgc                                      <  2:6272209/93‑1 (MQ=255)

                                                   cACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCAcgc                                      >  2:4260450/1‑93 (MQ=255)

                                                    aCGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCAcgcg                                     >  2:2693603/1‑93 (MQ=255)

                                                    aCGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCAcgcg                                     >  2:3547083/1‑93 (MQ=255)

                                                      gtgtTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGAt                                   >  2:4087932/1‑93 (MQ=255)

                                                       tgtTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATg                                  >  1:6137422/1‑93 (MQ=255)

                                                       tgtTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATg                                  >  1:5988386/1‑93 (MQ=255)

                                                        gtTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCCATGt                                 >  2:5734441/1‑93 (MQ=255)

                                                            cACCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTc                             <  1:1105117/93‑1 (MQ=255)

                                                             aCCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTcc                            >  1:1321304/1‑93 (MQ=255)

                                                             aCCTTCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTcc                            >  2:5791338/1‑93 (MQ=255)

                                                                ttCCAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGc                         <  2:18574/93‑1 (MQ=255)

                                                                   cAGCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAg                      >  2:1073588/1‑93 (MQ=255)

                                                                     gCGGTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCg                    >  2:610182/1‑93 (MQ=255)

                                                                       ggTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGAt                  <  1:1112456/93‑1 (MQ=255)

                                                                       ggTGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGAt                  <  1:1289465/93‑1 (MQ=255)

                                                                         tGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGt                <  1:2925950/93‑1 (MQ=255)

                                                                         tGGCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGt                >  2:3092491/1‑93 (MQ=255)

                                                                          ggCTCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGtt               <  1:4522820/93‑1 (MQ=255)

                                                                             tCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGc            >  1:2322096/1‑93 (MQ=255)

                                                                             tCAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGc            <  1:20391/93‑1 (MQ=255)

                                                                              cAAAGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGcc           >  1:1622350/1‑93 (MQ=255)

                                                                               aaaGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCa          <  1:2879411/93‑1 (MQ=255)

                                                                               aaaGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCa          >  1:634404/1‑93 (MQ=255)

                                                                               aaaGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCa          <  2:4741756/93‑1 (MQ=255)

                                                                                 aGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGa        <  1:4289942/93‑1 (MQ=255)

                                                                                 aGCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGa        <  1:4045678/93‑1 (MQ=255)

                                                                                  gCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGAt       <  2:4193177/93‑1 (MQ=255)

                                                                                  gCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGAt       <  1:2460201/93‑1 (MQ=255)

                                                                                  gCCCGGCGCACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGAt       <  2:1118864/93‑1 (MQ=255)

                                                                                       gcgcACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGATCGTGc  <  2:2983053/93‑1 (MQ=255)

AGCCTGGCAGAATATCGTCCTCAGTGAGATGAAGCGCGTTGATAATCGCCGCACGTGTTTCACCTTCCAGCGGTGGCTCAAAGCCCGGCGTACCTTGTTCCAGCGAAATACGATAATCATCGTTGTGCTTTTCGATAGTCACGCGATGTTTTCCTGCCAGCGATGTTTGCCAGATCGTGC  >  NC_000913/1533429‑1533608

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`