BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,535,627	A→G	R417R (CGT→CGC)	narY ←	cryptic nitrate reductase 2 beta subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,535,627	0	A	G	100.0%	676.2 / NA	209	R417R (CGT→CGC)	narY	cryptic nitrate reductase 2 beta subunit
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (104/105); total (104/105)

Only 100 of 222 total aligned reads displayed.

AGATAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAACGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGATATTG  >  NC_000913/1535538‑1535716

 gaTAGCGATACATCTCTTCGACCTTGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCa                                                                                       <  1:2910334/93‑1 (MQ=255)

 gaTAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCa                                                                                       >  2:3778297/1‑93 (MQ=255)

  aTAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCat                                                                                      <  1:3081382/93‑1 (MQ=255)

   tAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCata                                                                                     <  1:1199870/93‑1 (MQ=255)

   tAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCata                                                                                     >  1:5361857/1‑93 (MQ=255)

   tAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCata                                                                                     >  1:3261980/1‑93 (MQ=255)

   tAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCata                                                                                     <  2:5304253/93‑1 (MQ=255)

     gCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCAtata                                                                                   <  1:5463231/93‑1 (MQ=255)

       gATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAgg                                                                                 >  1:1908244/1‑92 (MQ=255)

        aTACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTg                                                                                >  2:776413/1‑93 (MQ=255)

        aTACATCTCTTCGACCTGGGCGACGCTCAGCCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTg                                                                                <  1:6214748/93‑1 (MQ=255)

         tACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTgg                                                                               <  2:1458243/93‑1 (MQ=255)

          aCATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGgc                                                                              <  2:1187400/93‑1 (MQ=255)

             tctcTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCa                                                                           >  2:4737860/1‑93 (MQ=255)

             tctcTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCa                                                                           >  2:2732187/1‑93 (MQ=255)

               tctTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATc                                                                         <  1:4432558/93‑1 (MQ=255)

               tctTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATc                                                                         <  2:1218574/93‑1 (MQ=255)

                 ttCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGGGTATCAGTAAGGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGc                                                                       >  2:1420254/1‑93 (MQ=255)

                    gACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCcat                                                                    >  2:1790026/1‑93 (MQ=255)

                    gACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCcat                                                                    >  1:5558024/1‑93 (MQ=255)

                    gACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCcat                                                                    >  1:5134512/1‑93 (MQ=255)

                     aCCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCcatc                                                                   >  1:3581325/1‑93 (MQ=255)

                     aCCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCcatc                                                                   >  1:3162751/1‑93 (MQ=255)

                      ccTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCcatca                                                                  >  2:4380863/1‑93 (MQ=255)

                      ccTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCcatca                                                                  <  1:2130029/93‑1 (MQ=255)

                      ccTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCcatca                                                                  >  2:5981502/1‑93 (MQ=255)

                       cTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCcatcat                                                                 <  1:3362034/93‑1 (MQ=255)

                       cTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTACACGGTTTGTGAGCGCATATAGTGGCGCATCGCcatcat                                                                 >  2:3323772/1‑93 (MQ=255)

                        tGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCatcatc                                                                <  2:2659476/93‑1 (MQ=255)

                         gggCGACGCTCAGGCCTACTTCGTCGATGGCACTAGCATCAGTAACGCCTTTCTCGGTTTGTCAGCGCAGATAGGTGCGCATCGCCATCAccc                                                               >  2:4681139/1‑93 (MQ=255)

                         gggCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATcc                                                               >  1:1754936/1‑93 (MQ=255)

                           gCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGt                                                             >  1:2676400/1‑93 (MQ=255)

                             gACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGttt                                                           >  2:1494555/1‑93 (MQ=255)

                              aCGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTc                                                          >  2:656406/1‑93 (MQ=255)

                               cGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCa                                                         <  1:2432012/93‑1 (MQ=255)

                                gCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAg                                                        >  2:5606339/1‑93 (MQ=255)

                                 cTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCatc                                                       >  2:3328977/1‑91 (MQ=255)

                                 cTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAgc                                                       <  2:4868302/93‑1 (MQ=255)

                                   cAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAgcgc                                                     <  1:5278669/93‑1 (MQ=255)

                                   cAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAgcgc                                                     >  1:5075248/1‑93 (MQ=255)

                                   cAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAgcgc                                                     >  2:4498555/1‑93 (MQ=255)

                                    aGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGcc                                                    <  2:6115168/93‑1 (MQ=255)

                                     ggCTTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGccc                                                   <  2:2985810/93‑1 (MQ=255)

                                     ggCCTACTTCGTCGATGGCATGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGccc                                                   >  1:4930594/1‑93 (MQ=255)

                                     ggCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGccc                                                   <  2:1333776/93‑1 (MQ=255)

                                      gCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCg                                                  <  2:92634/93‑1 (MQ=255)

                                        cTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCa                                                <  2:6300142/93‑1 (MQ=255)

                                        cTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCa                                                >  2:1948118/1‑93 (MQ=255)

                                         tACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCGACGGTTTTTAAGCGCATATAGTGGAGCCTAGCCATCATCCGTTTCAGCGCCCGCAg                                               >  2:4260482/1‑93 (MQ=255)

                                          aCTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGt                                              >  1:1060712/1‑93 (MQ=255)

                                           cTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTa                                             <  1:970403/93‑1 (MQ=255)

                                           cTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTa                                             >  1:3672/1‑93 (MQ=255)

                                           cTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTa                                             >  1:4468015/1‑93 (MQ=255)

                                           cTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTa                                             <  2:1581326/93‑1 (MQ=255)

                                            ttCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTac                                            <  2:4187110/93‑1 (MQ=255)

                                             tcgtcgATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTacc                                           >  1:4788714/1‑93 (MQ=255)

                                             tcgtcgATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTacc                                           >  1:852211/1‑93 (MQ=255)

                                                tcgATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTaccgga                                        >  2:1711701/1‑93 (MQ=255)

                                                tcgATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTaccgga                                        <  1:1531055/93‑1 (MQ=255)

                                                tcgATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTaccgga                                        >  1:4312207/1‑93 (MQ=255)

                                                  gATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTaccggacc                                      >  1:5326983/1‑93 (MQ=255)

                                                   aTGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTaccggaccg                                     <  1:5903673/93‑1 (MQ=255)

                                                   aTGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTaccggaccg                                     <  2:4991691/93‑1 (MQ=255)

                                                     ggCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGt                                   >  2:6057191/1‑93 (MQ=255)

                                                       cACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTAt                                 >  2:88256/1‑93 (MQ=255)

                                                       cACGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTAt                                 <  2:408936/93‑1 (MQ=255)

                                                         cGAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCg                               >  1:2279879/1‑93 (MQ=255)

                                                          gAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGc                              <  1:1788586/93‑1 (MQ=255)

                                                          gAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGc                              <  2:3847133/93‑1 (MQ=255)

                                                          gAGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGc                              <  1:25735/93‑1 (MQ=255)

                                                           aGTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGcc                             >  2:1848072/1‑93 (MQ=255)

                                                            gTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCg                            <  2:3093752/93‑1 (MQ=255)

                                                            gTATCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCg                            >  1:3642881/1‑93 (MQ=255)

                                                               tCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCa                         <  1:4573719/93‑1 (MQ=255)

                                                               tCAGTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCa                         >  2:581959/1‑93 (MQ=255)

                                                                  gTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTc                      <  1:1246402/93‑1 (MQ=255)

                                                                  gTAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTc                      <  2:3609148/93‑1 (MQ=255)

                                                                  gTAACCCCTTCCACGGTTTGGGAGCGCAGATAGTGGCCCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTc                      <  2:5209535/93‑1 (MQ=255)

                                                                   tAACGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCa                     <  2:2242496/93‑1 (MQ=255)

                                                                    aaCGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCaa                    <  1:1690094/93‑1 (MQ=255)

                                                                      cGCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCAGACCGGTATCGCCGGCACTCAACa                  <  1:3745236/93‑1 (MQ=255)

                                                                       gcattCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACat                 <  2:1066003/90‑1 (MQ=255)

                                                                       gCCTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACat                 >  2:4572473/1‑93 (MQ=255)

                                                                       cccTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACat                 <  2:3505829/92‑1 (MQ=255)

                                                                        ccTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACata                <  1:4051159/93‑1 (MQ=255)

                                                                         cTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACatat               <  1:5958714/93‑1 (MQ=255)

                                                                         cTTCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACatat               <  1:199719/93‑1 (MQ=255)

                                                                          ttCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATAtt              <  2:3970407/93‑1 (MQ=255)

                                                                          ttCCACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATAtt              <  2:1886504/93‑1 (MQ=255)

                                                                          ttCCACGGTTTGTGAGCGCATATAGTGGAGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATAtt              >  2:494716/1‑93 (MQ=255)

                                                                          tgtcACGGGTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATAtt              <  2:5222661/90‑1 (MQ=255)

                                                                            ccACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTgg            >  2:846727/1‑93 (MQ=255)

                                                                            ccACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTgg            >  2:442561/1‑93 (MQ=255)

                                                                             cACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGc           >  1:727202/1‑93 (MQ=255)

                                                                             cACGGTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGc           >  1:4132616/1‑93 (MQ=255)

                                                                                ggTTTGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCgag        >  2:5538080/1‑93 (MQ=255)

                                                                                  tttGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGat      <  1:301354/93‑1 (MQ=255)

                                                                                   ttGTGAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGata     <  1:3376379/93‑1 (MQ=255)

                                                                                    tgtgAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGatat    <  2:3299808/93‑1 (MQ=255)

                                                                                      tgAGCGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGATATTg  <  1:349187/93‑1 (MQ=255)

AGATAGCGATACATCTCTTCGACCTGGGCGACGCTCAGGCCTACTTCGTCGATGGCACGAGTATCAGTAACGCCTTCCACGGTTTGTGAACGCATATAGTGGCGCATCGCCATCATCCGTTTCAGCGCCCGCAGTACCGGACCGGTATCGCCGGCACTCAACATATTGGCGAGATATTG  >  NC_000913/1535538‑1535716

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`