BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	177,523	T→C	V34V (GTA→GTG)	yadS ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	177,523	0	T	C	100.0%	758.8 / NA	235	V34V (GTA→GTG)	yadS	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (113/122); total (113/122)

Only 100 of 240 total aligned reads displayed.

ATCGGTGGGATCTTTCACCCAAAATACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGTACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGCAAATACCGCTGTGCCGACTATATCCAGCC  >  NC_000913/177433‑177611

 tCGGTGGGATCTTTCACCCAAAATACCGGGCCGTGATCCAGTGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGCTTACCACGCCCAGCAcc                                                                                       >  1:3054762/1‑93 (MQ=255)

  cGGTGGGATCTTTCACCCAAAATACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCa                                                                                      <  2:6087391/93‑1 (MQ=255)

   ggTGGGATCTTTCACCCAAAATACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTAGCACGCccaccaccaa                                                                                     >  2:5903287/1‑92 (MQ=255)

   ggTGGGATCTTTCACCCAAAATACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAg                                                                                     <  1:2678867/93‑1 (MQ=255)

    gTGGGATCTTTCACCCAAAATACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGGCCAGCACCAGa                                                                                    >  1:1567782/1‑93 (MQ=255)

    gTGGGATCTTTCACCCAAAATACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGa                                                                                    >  1:5672254/1‑93 (MQ=255)

    gTGGGATCTTTCACCCAAAATACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGa                                                                                    >  1:5358300/1‑93 (MQ=255)

    gTGGGATCTTTCACCCAAAATACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGa                                                                                    >  2:2384024/1‑93 (MQ=255)

     tGGGATCTTTCACCCAAAATACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGaa                                                                                   <  2:3239638/93‑1 (MQ=255)

      gggATCTTTCACCCAAAATACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAac                                                                                  >  2:1522056/1‑93 (MQ=255)

       ggATCTTTCACCCAAAATACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAaca                                                                                 >  1:3419094/1‑93 (MQ=255)

        gATCTTTCACCCAAAATACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAacac                                                                                >  1:920090/1‑93 (MQ=255)

        gATCTTTCACCCAAAATACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAacac                                                                                >  1:2547276/1‑93 (MQ=255)

        gATCTTTCACCCAAAATACCGGGCCGGGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAacac                                                                                <  1:3770646/93‑1 (MQ=255)

          tCTTTCACCCAAAATACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCa                                                                              >  1:2852988/1‑93 (MQ=255)

           cTTTCACCCAAAATACCGGGCCGTGATCCAGCGTCATGTCGCGAATTGTCCCGCCGCCTGCTGCGGTTACCGCGACCAGCACCAGAACACCaa                                                                             <  2:21272/93‑1 (MQ=255)

            tttCACCCAAAATACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCaaa                                                                            <  2:5235820/93‑1 (MQ=255)

             ttCACCCAAAATACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCaaaa                                                                           <  1:3452194/93‑1 (MQ=255)

             ttCACCCAAAATACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCaaaa                                                                           <  1:142295/93‑1 (MQ=255)

              tCACCCAAAATACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAg                                                                          >  1:5833921/1‑93 (MQ=255)

              tCACCCAAAATACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAg                                                                          >  2:4567367/1‑93 (MQ=255)

              tCACCCAAAATACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAg                                                                          <  1:6226150/93‑1 (MQ=255)

               cACCCAAAATACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAgg                                                                         <  2:2625471/93‑1 (MQ=255)

               cACCCAAAATACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAgg                                                                         <  2:5941404/93‑1 (MQ=255)

               cACCCAAAATACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAgg                                                                         <  2:4296173/93‑1 (MQ=255)

                aCCCAAAATCCCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAggg                                                                        <  2:1296626/93‑1 (MQ=255)

                aCCCAAAATACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAggg                                                                        >  2:3000308/1‑93 (MQ=255)

                 cccAAAATACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGaa                                                                                   <  2:3644481/81‑1 (MQ=255)

                  ccAAAATACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTc                                                                      <  2:1344081/93‑1 (MQ=255)

                   cAAAATACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTcc                                                                     <  1:2029574/93‑1 (MQ=255)

                    aaaaTACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCa                                                                    >  1:2180132/1‑93 (MQ=255)

                    aaaaTACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCa                                                                    >  1:1655942/1‑93 (MQ=255)

                      aaTACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATa                                                                  <  2:335430/93‑1 (MQ=255)

                      aaTACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATa                                                                  >  2:5774517/1‑93 (MQ=255)

                       aTACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATAc                                                                 <  2:5786513/93‑1 (MQ=255)

                       aTACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATAc                                                                 >  2:1205448/1‑93 (MQ=255)

                       aTACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATAc                                                                 <  2:3095447/93‑1 (MQ=255)

                         aCCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGc                                                               <  1:3641855/93‑1 (MQ=255)

                          ccGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCa                                                              >  1:4375682/1‑93 (MQ=255)

                          ccGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCa                                                              <  1:901803/93‑1 (MQ=255)

                           cGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCaa                                                             <  2:3846975/93‑1 (MQ=255)

                            gggCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAAt                                                            >  2:4662399/1‑93 (MQ=255)

                             ggCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAAtt                                                           >  1:4286735/1‑93 (MQ=255)

                                cGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTc                                                        >  1:1148296/1‑93 (MQ=255)

                                 gTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTcc                                                       <  1:123110/93‑1 (MQ=255)

                                  tGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCg                                                      >  2:4419726/1‑93 (MQ=255)

                                   gATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCgg                                                     >  1:5067504/1‑93 (MQ=255)

                                      ccAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTa                                                  >  2:5303962/1‑93 (MQ=255)

                                      ccAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTa                                                  >  1:5253993/1‑93 (MQ=255)

                                       cAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAAAAACAAAAGGGTCCATACGCAATTTTCCGGCTaa                                                 >  2:2921481/1‑93 (MQ=255)

                                         gcgcCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACa                                               >  1:3951060/1‑93 (MQ=255)

                                         gcgcCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACa                                               <  1:54497/93‑1 (MQ=255)

                                          cgcCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACaa                                              <  1:1056838/93‑1 (MQ=255)

                                           gcCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACaaa                                             <  1:960266/93‑1 (MQ=255)

                                           gcCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAAGGTCCATACGGAATTTTACGGCTAACaaa                                             >  2:2237293/1‑93 (MQ=255)

                                            ccATGTCGCGCATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCGATTTTCCGGCTAaaaaaa                                            <  2:6300605/93‑1 (MQ=255)

                                            ccATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACaaaa                                            <  2:5492923/93‑1 (MQ=255)

                                            ccATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACaaaa                                            >  1:4614228/1‑93 (MQ=255)

                                            ccATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACaaaa                                            >  1:3216730/1‑93 (MQ=255)

                                              aTGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACg                                          >  1:781757/1‑93 (MQ=255)

                                               tGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGc                                         <  1:5851922/93‑1 (MQ=255)

                                               tGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGc                                         >  1:1976781/1‑93 (MQ=255)

                                                    cgAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGgag                                    >  2:895662/1‑93 (MQ=255)

                                                     gAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGgaga                                   <  1:1894188/93‑1 (MQ=255)

                                                     gAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGgaga                                   <  2:74923/93‑1 (MQ=255)

                                                      aaTTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGAt                                  <  1:4170246/93‑1 (MQ=255)

                                                       aTTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATg                                 >  2:3773341/1‑93 (MQ=255)

                                                        ttGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATgg                                <  1:6104449/93‑1 (MQ=255)

                                                        ttGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATgg                                <  2:1132037/93‑1 (MQ=255)

                                                        ttGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATgg                                <  1:5586934/93‑1 (MQ=255)

                                                         tGTCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGc                               <  1:4238886/93‑1 (MQ=255)

                                                           tCCCGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGCaa                             >  2:4240984/1‑93 (MQ=255)

                                                            cccGCCGCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGCaaa                            <  1:3868251/93‑1 (MQ=255)

                                                             ccgccgCCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGCAAAt                           <  2:1554955/93‑1 (MQ=255)

                                                              cgccgcCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGCAAATa                          >  2:3573006/1‑93 (MQ=255)

                                                              cgccgcCTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGCAAATa                          <  1:4821370/93‑1 (MQ=255)

                                                               gccgccTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGCAAATAc                         <  1:4867037/93‑1 (MQ=255)

                                                               gccgccTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGCAAATAc                         >  2:2738740/1‑93 (MQ=255)

                                                               gccgccTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGCAAATAc                         <  1:3029678/93‑1 (MQ=255)

                                                                ccgccTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGCAAATAcc                        <  1:5986338/93‑1 (MQ=255)

                                                                  gccTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGCAAATACCGc                      <  1:2186698/93‑1 (MQ=255)

                                                                  gccTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGCAAATACCGc                      <  2:3407468/93‑1 (MQ=255)

                                                                  gccTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGCAAATACCGc                      >  2:1889694/1‑93 (MQ=255)

                                                                  gccTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGCAAATACCGc                      >  2:6012793/1‑93 (MQ=255)

                                                                   ccTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGCAAATACCGCt                     <  1:2974820/93‑1 (MQ=255)

                                                                    cTACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGCAAATACCGCtg                    <  1:2792153/93‑1 (MQ=255)

                                                                     tACTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGCAAATACCGCtgt                   >  1:518799/1‑93 (MQ=255)

                                                                       cTGCGGTTACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGCAAATACCGCTGTGc                 <  2:5642055/93‑1 (MQ=255)

                                                                        tGCGGTTACCACGCCCAGCACCAGAGCACCAAAAGGGTCCATACGCAATTTGCCGGCTAACAAAGCGCCGGAGATGGCAAATACCGCTGTGcc                <  1:1487866/93‑1 (MQ=255)

                                                                            gTTACCACGCCCAGCACCAGAGCACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGCAAATACCGCTGTGCCGACt            <  2:5359157/93‑1 (MQ=255)

                                                                             ttACCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGCAAATACCGCTGTGCCGACta           <  1:5648873/93‑1 (MQ=255)

                                                                               aCCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGCAAATACCGCTGTGCCGACtata         <  2:4919635/93‑1 (MQ=255)

                                                                               aCCACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGCAAATACCGCTGTGCCGACtata         <  2:1298181/93‑1 (MQ=255)

                                                                                ccACGCCCAGCACCAGAACACCAAAAGGGTCCATACGCACTTTTCCGGCTAACAAAACGCCGGAGATGGCAAATACCGCTGTGCCGACTatat        >  1:4554612/1‑93 (MQ=255)

                                                                                   cGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGCAAATACCGCTGTGCCGACTATATCCa     >  2:3306114/1‑93 (MQ=255)

                                                                                   cGCCCAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGCAAATACCGCTGTGCCGACTATATCCa     <  1:729399/93‑1 (MQ=255)

                                                                                     cccAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGCAAATACCGCTGTGCCGACTATATCCAGc   <  2:3603836/93‑1 (MQ=255)

                                                                                      ccAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGCAAATACCGCTGTGCCGACTATATCCAGcc  >  2:703864/1‑93 (MQ=255)

                                                                                      ccAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGCAAATACCGCTGTGCCGACTATATCCAGcc  >  1:2090830/1‑93 (MQ=255)

                                                                                      ccAGCACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGCAAATACCGCTGTGCCGACTATATCCAGcc  >  2:408458/1‑93 (MQ=255)

ATCGGTGGGATCTTTCACCCAAAATACCGGGCCGTGATCCAGCGCCATGTCGCGAATTGTCCCGCCGCCTACTGCGGTTACCACGCCCAGTACCAGAACACCAAAAGGGTCCATACGCAATTTTCCGGCTAACAAAACGCCGGAGATGGCAAATACCGCTGTGCCGACTATATCCAGCC  >  NC_000913/177433‑177611

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`