BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,567,922	A→G	F198L (TTC→CTC)	xasA ←	acid sensitivity protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,567,922	0	A	G	100.0%	662.6 / NA	203	F198L (TTC→CTC)	xasA	acid sensitivity protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (90/113); total (90/113)

Only 100 of 211 total aligned reads displayed.

CATTTCATTGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAAGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAAAATAAATG  >  NC_000913/1567833‑1568011

catttcattGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTc                                                                                        >  1:5878007/1‑93 (MQ=255)

 atttcattGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGACGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCa                                                                                       <  2:5134869/93‑1 (MQ=255)

  tttcattGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAg                                                                                      >  2:3380163/1‑93 (MQ=255)

    tcattGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAggg                                                                                    >  1:2848817/1‑93 (MQ=255)

     tattGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGga                                                                                   <  1:4531700/92‑1 (MQ=255)

      attGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGgaa                                                                                  >  1:6059813/1‑93 (MQ=255)

        tGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGgaaga                                                                                <  1:2918488/93‑1 (MQ=255)

           cGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAgg                                                                             >  2:5051831/1‑93 (MQ=255)

            gTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGt                                                                            <  1:2610051/93‑1 (MQ=255)

             tGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTc                                                                           <  2:4521078/93‑1 (MQ=255)

             tGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTc                                                                           >  2:1732408/1‑93 (MQ=255)

              gggTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCt                                                                          >  1:5526740/1‑93 (MQ=255)

              gggTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCt                                                                          >  2:3037330/1‑93 (MQ=255)

              gggTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCt                                                                          >  2:2542221/1‑93 (MQ=255)

               ggTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCtt                                                                         <  1:3135306/93‑1 (MQ=255)

                gTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTc                                                                        <  2:5892929/93‑1 (MQ=255)

                 ttGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTGGAGAGGTCAGGGAAGAAGGTCTTCg                                                                       <  2:1380225/93‑1 (MQ=255)

                   gCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGaa                                                                     >  2:5597261/1‑93 (MQ=255)

                    cGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAAt                                                                    >  1:5812414/1‑93 (MQ=255)

                      gATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATcc                                                                  >  1:4082277/1‑93 (MQ=255)

                       aTGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCa                                                                 >  2:3267323/1‑93 (MQ=255)

                         gCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCAtt                                                               >  1:6105562/1‑93 (MQ=255)

                           ttCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTc                                                             >  1:2775368/1‑93 (MQ=255)

                            tCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCg                                                            >  2:4077204/1‑93 (MQ=255)

                            tCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCg                                                            >  2:124196/1‑93 (MQ=255)

                            tCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCg                                                            >  1:2537255/1‑93 (MQ=255)

                               aCGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTCGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATa                                                         <  2:2926641/93‑1 (MQ=255)

                               aCGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATa                                                         <  1:2158834/93‑1 (MQ=255)

                               aCGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATa                                                         <  2:4979570/93‑1 (MQ=255)

                               aCGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATa                                                         <  2:5830454/93‑1 (MQ=255)

                                cGCCCATATAACTCAAAATGAAGGCAACAAATACTGCCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAg                                                        <  1:1206090/93‑1 (MQ=255)

                                 gCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGc                                                       <  1:1443010/93‑1 (MQ=255)

                                  cccATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCa                                                      <  1:923565/93‑1 (MQ=255)

                                   ccATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCaa                                                     >  1:6271790/1‑93 (MQ=255)

                                   ccATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCaa                                                     >  2:4866946/1‑93 (MQ=255)

                                   ccATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCaa                                                     <  2:5717700/93‑1 (MQ=255)

                                    cATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCCAc                                                    >  2:4638309/1‑93 (MQ=255)

                                    cATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAAc                                                    <  2:2758805/93‑1 (MQ=255)

                                    cATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAAc                                                    >  1:3965886/1‑93 (MQ=255)

                                    cATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAAc                                                    >  1:1007664/1‑93 (MQ=255)

                                     atatAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACg                                                   <  1:3335945/93‑1 (MQ=255)

                                      tataTCACAAAATGAAGGCCACAATAACTACCAGGGTTCCCCCTTTGGGGAGCTCAGGGAAGAAGGTCTTCGAAGACATTTCGAAAGCATCgg                                                  <  2:1939998/93‑1 (MQ=255)

                                      tataACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACgg                                                  >  2:760840/1‑93 (MQ=255)

                                       ataACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACggg                                                 <  1:3738078/93‑1 (MQ=255)

                                          aCTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGc                                              <  1:3573546/93‑1 (MQ=255)

                                          aCTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGc                                              <  1:401087/93‑1 (MQ=255)

                                            tCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCAc                                            <  2:4043208/93‑1 (MQ=255)

                                               aaaTGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCgg                                         >  1:5155541/1‑93 (MQ=255)

                                                aaTGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGa                                        <  2:6253057/93‑1 (MQ=255)

                                                 aTGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAg                                       <  1:864196/93‑1 (MQ=255)

                                                  tGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGt                                      >  1:1750150/1‑93 (MQ=255)

                                                  tGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGt                                      <  1:4029615/93‑1 (MQ=255)

                                                  tGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGt                                      >  1:3270094/1‑93 (MQ=255)

                                                  tGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGt                                      <  1:5188256/93‑1 (MQ=255)

                                                    aaGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGc                                    <  1:4660410/93‑1 (MQ=255)

                                                      ggCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAg                                  >  2:390806/1‑93 (MQ=255)

                                                        caacaaATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGAt                                >  1:2395069/1‑93 (MQ=255)

                                                        caacaaATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGAt                                <  1:5638117/93‑1 (MQ=255)

                                                        caacaaATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGAt                                <  1:4192166/93‑1 (MQ=255)

                                                          acaaATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGGAGAAGGTCTTCGAATCCATTTCGATAGCCACGGGGGGACCGGAGTGCGGATaa                              >  2:5219624/1‑93 (MQ=255)

                                                          acaaATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTGCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATaa                              <  1:5402735/93‑1 (MQ=255)

                                                            aaaTACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAAt                            <  2:4317429/93‑1 (MQ=255)

                                                             aaTACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATa                           <  1:3514292/93‑1 (MQ=255)

                                                             aaTACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATa                           >  2:5420419/1‑93 (MQ=255)

                                                             aaTACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATa                           >  2:1810996/1‑93 (MQ=255)

                                                              aTACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAg                          >  1:4354053/1‑93 (MQ=255)

                                                              aTACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAg                          >  2:5912594/1‑93 (MQ=255)

                                                               tactacCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGc                         <  2:2436266/93‑1 (MQ=255)

                                                               tactacCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGc                         >  1:5519831/1‑93 (MQ=255)

                                                               tactacCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGc                         <  1:1839401/93‑1 (MQ=255)

                                                                 ctacCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCg                       >  1:1332384/1‑93 (MQ=255)

                                                                  tacCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGc                      >  2:4172155/1‑93 (MQ=255)

                                                                  tacCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGc                      <  2:5919174/93‑1 (MQ=255)

                                                                    ccAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTa                    <  1:2452013/93‑1 (MQ=255)

                                                                     cAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTaa                   >  2:5864048/1‑93 (MQ=255)

                                                                     cAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTaa                   <  1:1908370/93‑1 (MQ=255)

                                                                     cAGGGTGCAAACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTaa                   <  1:1936339/93‑1 (MQ=255)

                                                                      aGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAAt                  >  2:3337742/1‑93 (MQ=255)

                                                                      aGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAAt                  >  2:6038320/1‑93 (MQ=255)

                                                                       gggTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATg                 >  1:1454912/1‑93 (MQ=255)

                                                                       gggTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATg                 >  2:1569091/1‑93 (MQ=255)

                                                                        ggTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGc                <  1:814446/93‑1 (MQ=255)

                                                                        ggTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGc                <  1:667309/93‑1 (MQ=255)

                                                                        ggTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGc                >  2:5017475/1‑93 (MQ=255)

                                                                        ggTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGc                <  1:5973774/93‑1 (MQ=255)

                                                                            cccACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATc            <  1:3114090/93‑1 (MQ=255)

                                                                            cccACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATc            <  2:5448635/93‑1 (MQ=255)

                                                                             ccACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCa           >  2:2024740/1‑93 (MQ=255)

                                                                              cACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCaa          <  1:4804681/93‑1 (MQ=255)

                                                                              cACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCaa          <  2:1139561/93‑1 (MQ=255)

                                                                               aCTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCaaa         <  1:3884209/93‑1 (MQ=255)

                                                                               aCTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCaaa         >  1:3683502/1‑93 (MQ=255)

                                                                                cTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCaaaa        >  1:4429910/1‑93 (MQ=255)

                                                                                cTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCaaaa        >  1:1600182/1‑93 (MQ=255)

                                                                                cTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCaaaa        >  1:3002377/1‑93 (MQ=255)

                                                                                cTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCaaaa        >  2:1693784/1‑93 (MQ=255)

                                                                                 tttAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAaaat       <  2:4770718/93‑1 (MQ=255)

                                                                                 tttAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAaaat       <  2:285772/93‑1 (MQ=255)

                                                                                  ttAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAaaata      >  2:3778901/1‑93 (MQ=255)

                                                                                      agagGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAAAATAAATg  <  1:6166227/93‑1 (MQ=255)

CATTTCATTGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAAGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAAAATAAATG  >  NC_000913/1567833‑1568011

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`