Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,568,197 A→G M106T (ATG→ACG)  xasA ← acid sensitivity protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,568,1970AG100.0% 609.3 / NA 189M106T (ATG→ACG) xasAacid sensitivity protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (87/102);  total (87/102)

Only 100 of 189 total aligned reads displayed.

ATGAGTGCTGCAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCATCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGC  >  NC_000913/1568107‑1568285
                                                                                          |                                                                                        
 tgaGTGCTGCAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCg                                                                                       <  1:562376/93‑1 (MQ=255)
 agaGTGCTGCAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGACCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCg                                                                                       <  1:985693/92‑1 (MQ=255)
    gTGCTGCAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGaa                                                                                    >  2:5265997/1‑93 (MQ=255)
     tgctgcAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAAt                                                                                   <  1:5017475/93‑1 (MQ=255)
      gctgcAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATa                                                                                  <  2:1385724/93‑1 (MQ=255)
       ctgcAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATaa                                                                                 >  2:5524160/1‑93 (MQ=255)
         gcAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATaaaa                                                                               >  2:5149524/1‑93 (MQ=255)
         gcAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATaaaa                                                                               <  1:3859430/93‑1 (MQ=255)
         gcAATAGTTTTGGTAATGGGGTCTTCATGCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATaaaa                                                                               <  1:5219624/93‑1 (MQ=255)
           aaTAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAAcc                                                                             <  2:4805571/93‑1 (MQ=255)
           aaTAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAAcc                                                                             >  1:6279367/1‑93 (MQ=255)
             tAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTGGGAATAAAACCaa                                                                           >  1:1289701/1‑93 (MQ=255)
             tAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCaa                                                                           <  1:5398978/93‑1 (MQ=255)
             tAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCaa                                                                           <  2:6012892/93‑1 (MQ=255)
             tAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGGCGGAATAAAACCaa                                                                           <  2:5434127/93‑1 (MQ=255)
              aGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAAt                                                                          <  2:1471180/93‑1 (MQ=255)
              aGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAAt                                                                          <  1:4077204/93‑1 (MQ=255)
               gTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATg                                                                         >  1:5151686/1‑93 (MQ=255)
                ttttGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATgg                                                                        <  1:124196/93‑1 (MQ=255)
                 tttGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGc                                                                       <  1:2079448/93‑1 (MQ=255)
                   tGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGa                                                                     <  2:934058/93‑1 (MQ=255)
                      tAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGAttt                                                                  <  1:2834266/93‑1 (MQ=255)
                      tAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGAttt                                                                  <  1:5555010/93‑1 (MQ=255)
                       aaTGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTg                                                                 >  1:4157894/1‑93 (MQ=255)
                       aaTGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTg                                                                 >  1:1192259/1‑93 (MQ=255)
                         tGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCa                                                               >  2:1139515/1‑93 (MQ=255)
                         tGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCa                                                               >  1:5163434/1‑93 (MQ=255)
                           gggTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGa                                                             >  1:3622643/1‑93 (MQ=255)
                             gTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATa                                                           <  2:3002377/93‑1 (MQ=255)
                             gTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATa                                                           >  2:2095892/1‑93 (MQ=255)
                              tCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGGGCACCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGAATTGCAGATAg                                                          >  2:3397135/1‑93 (MQ=255)
                               cTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGc                                                         >  2:5055657/1‑93 (MQ=255)
                               cTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGc                                                         >  1:4500420/1‑93 (MQ=255)
                                ttcattcaGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGTTATTTGCAGATAGcc                                                        >  2:6309644/1‑93 (MQ=255)
                                 tcattcaGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCa                                                       >  2:6072466/1‑93 (MQ=255)
                                    ttcaGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAAt                                                    >  2:2565600/1‑93 (MQ=255)
                                    ttcaGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAAt                                                    >  1:1673054/1‑93 (MQ=255)
                                    ttcaGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAAt                                                    >  2:4284227/1‑93 (MQ=255)
                                     tcaGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATg                                                   <  2:2511432/93‑1 (MQ=255)
                                      caGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATga                                                  <  2:5346130/93‑1 (MQ=255)
                                       aGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATgag                                                 <  2:3002012/93‑1 (MQ=255)
                                        gcgcTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATgaga                                                >  1:2013931/1‑93 (MQ=255)
                                        gcgcTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATgaga                                                >  2:6206562/1‑93 (MQ=255)
                                        gcgcTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATgaga                                                >  1:1802635/1‑93 (MQ=255)
                                         cgcTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGAt                                               <  2:4231077/93‑1 (MQ=255)
                                         cgcTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGAt                                               <  1:76502/93‑1 (MQ=255)
                                          gcTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATc                                              >  2:4706526/1‑93 (MQ=255)
                                          gcTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATc                                              >  2:695266/1‑93 (MQ=255)
                                          gcTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATc                                              <  2:1332384/93‑1 (MQ=255)
                                          gcTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATc                                              >  1:4446511/1‑93 (MQ=255)
                                            tGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGc                                            <  2:5417629/93‑1 (MQ=255)
                                            tGGCCATTTAAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGc                                            >  1:6300927/1‑93 (MQ=255)
                                             ggCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCt                                           <  1:6038320/93‑1 (MQ=255)
                                             ggCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCt                                           <  1:4305053/93‑1 (MQ=255)
                                             ggCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCt                                           <  2:3640339/93‑1 (MQ=255)
                                             ggCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCt                                           <  2:4922471/93‑1 (MQ=255)
                                             ggCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCt                                           >  1:3190703/1‑93 (MQ=255)
                                             ggCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCt                                           <  1:5000239/93‑1 (MQ=255)
                                              gCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTg                                          <  2:2775368/93‑1 (MQ=255)
                                              gCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTg                                          <  1:5351612/93‑1 (MQ=255)
                                                 aTTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCaa                                       >  1:4185452/1‑93 (MQ=255)
                                                  tttCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCaaa                                      <  1:2346889/93‑1 (MQ=255)
                                                  tttCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCaaa                                      <  2:1713178/93‑1 (MQ=255)
                                                   ttCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAAt                                     <  2:3244637/93‑1 (MQ=255)
                                                      aGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATccc                                  >  2:5882519/1‑93 (MQ=255)
                                                      aGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATccc                                  <  1:2481242/93‑1 (MQ=255)
                                                      aGGATGTAGGAGAGTGCCCCGAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATccc                                  >  2:6163294/1‑93 (MQ=255)
                                                       ggATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATcccc                                 >  1:4369307/1‑93 (MQ=255)
                                                       ggATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGAGATTTGCAGATAGCCAAATGAGATCGCTGCAAATcccc                                 >  2:4488250/1‑93 (MQ=255)
                                                        gATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCa                                <  1:4706408/93‑1 (MQ=255)
                                                        gATGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCa                                >  2:4345969/1‑93 (MQ=255)
                                                         aTGTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCAt                               <  1:4388875/93‑1 (MQ=255)
                                                           gTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCAtct                             <  1:1049578/93‑1 (MQ=255)
                                                           gTAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCAtct                             <  2:3894183/93‑1 (MQ=255)
                                                            tAGGAGAGTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCAtctc                            <  2:1940998/93‑1 (MQ=255)
                                                                   gTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCa                     >  2:4163427/1‑93 (MQ=255)
                                                                   gTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCa                     <  2:4853205/93‑1 (MQ=255)
                                                                   gTGCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCa                     <  2:3761391/93‑1 (MQ=255)
                                                                    tGCCCCTAACACGAAATAGAGCGTCGGGATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCag                    >  1:3912340/1‑93 (MQ=255)
                                                                     gCCCCTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCaga                   <  1:1918226/93‑1 (MQ=255)
                                                                      ccccTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCagag                  >  1:3557568/1‑93 (MQ=255)
                                                                      ccccTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCagag                  <  2:5713734/93‑1 (MQ=255)
                                                                        cgtAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTa                <  1:560547/91‑1 (MQ=255)
                                                                        ccTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTa                <  2:4429910/93‑1 (MQ=255)
                                                                        ccTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTa                <  1:3775508/93‑1 (MQ=255)
                                                                        ccTAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTa                <  2:1853420/93‑1 (MQ=255)
                                                                          tAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTAtt              >  2:4725028/1‑93 (MQ=255)
                                                                          tAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTAtt              <  2:3467548/93‑1 (MQ=255)
                                                                          tAACACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTAtt              >  1:1564835/1‑93 (MQ=255)
                                                                           aaCACGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTAttt             >  2:2686618/1‑93 (MQ=255)
                                                                            acacGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTg            <  2:4354053/93‑1 (MQ=255)
                                                                              acGAAATAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGAt          <  1:3363970/93‑1 (MQ=255)
                                                                                  aaTAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATAccc      >  1:4365262/1‑93 (MQ=255)
                                                                                  aaTAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATAccc      <  1:1083023/93‑1 (MQ=255)
                                                                                    tAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAg    <  1:4866946/93‑1 (MQ=255)
                                                                                    tAGAGCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAg    <  2:2810748/93‑1 (MQ=255)
                                                                                     agagCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAgg   >  2:5907041/1‑93 (MQ=255)
                                                                                     agagCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAgg   <  1:1103899/93‑1 (MQ=255)
                                                                                      gagCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGc  >  2:2286062/1‑93 (MQ=255)
                                                                                      gagCGTCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGc  <  1:3249240/93‑1 (MQ=255)
                                                                                          |                                                                                        
ATGAGTGCTGCAATAGTTTTGGTAATGGGGTCTTCATTCAGCGCTGGCCATTTCAGGATGTAGGAGAGTGCCCCTAACACGAAATAGAGCATCGGAATAAAACCAATGGCGATTTGCAGATAGCCAAATGAGATCGCTGCAAATCCCCATCTCGGCCCCAGAGTATTTGATACCCAGGC  >  NC_000913/1568107‑1568285

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: