BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,587,161	T→C	I289V (ATT→GTT)	b1505 ←	putative outer membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,587,161	0	T	C	100.0%	762.5 / NA	233	I289V (ATT→GTT)	b1505	putative outer membrane protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (106/127); total (106/127)

Only 100 of 235 total aligned reads displayed.

CAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTT  >  NC_000913/1587071‑1587250

cAATTGCACCGAATGGAACGCTCTTATTCCCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAg                                                                                         <  1:6304987/93‑1 (MQ=255)

 aaTTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGc                                                                                        >  2:450616/1‑93 (MQ=255)

 aaTTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGc                                                                                        >  2:1343706/1‑93 (MQ=255)

  aTTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCa                                                                                       >  2:4691288/1‑93 (MQ=255)

   ttGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTCCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCAc                                                                                      <  1:6192560/93‑1 (MQ=255)

     gCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCg                                                                                    >  2:5787090/1‑93 (MQ=255)

      cACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGt                                                                                   >  2:1117665/1‑93 (MQ=255)

      cACCGAATGCAGCGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGt                                                                                   <  2:6046354/93‑1 (MQ=255)

       aCCGAATGAAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTg                                                                                  <  2:4593715/93‑1 (MQ=255)

         cGAATGGACCGCTCTTATTACCGTACTTCAACGTCATTAATCCTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAg                                                                                <  2:216575/93‑1 (MQ=255)

         cGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAg                                                                                >  2:921584/1‑93 (MQ=255)

          gAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGt                                                                               >  1:272695/1‑93 (MQ=255)

           aaTGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGtt                                                                              >  1:1341964/1‑93 (MQ=255)

            aTGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTg                                                                             <  2:2020300/93‑1 (MQ=255)

            aTGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTg                                                                             <  1:5609893/93‑1 (MQ=255)

                aaCGCTCTTATTACCGTACTTCAACGTCATTAATCCTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGAt                                                                         <  2:1435713/93‑1 (MQ=255)

                aaCGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGAt                                                                         <  1:5047913/93‑1 (MQ=255)

                   gCTCTTATTACCGTACTTCAACGTCATTAATACTTACCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGAc                                                                      <  1:4078557/93‑1 (MQ=255)

                   cctctTATTCCCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGAc                                                                      <  2:441857/92‑1 (MQ=255)

                   cctctTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGAc                                                                      <  2:4805531/92‑1 (MQ=255)

                    ctctTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACa                                                                     <  2:1518697/93‑1 (MQ=255)

                     tctTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAg                                                                    >  2:230224/1‑93 (MQ=255)

                     tctTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAg                                                                    >  2:4898979/1‑93 (MQ=255)

                     tctTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAg                                                                    <  1:4504796/93‑1 (MQ=255)

                      ctTATTACCGTACTTCAACGTCCTTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCACCAGCACCGTGAGCTGGGATGACAGt                                                                   >  1:3698873/1‑93 (MQ=255)

                      ctTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGt                                                                   >  2:5891433/1‑93 (MQ=255)

                       ttattaCCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTg                                                                  >  1:5679650/1‑93 (MQ=255)

                         attaCCGTACTTCAACGTCATTAATACTTCCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGAc                                                                <  1:5945703/93‑1 (MQ=255)

                           taacGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCa                                                              >  1:4584698/4‑93 (MQ=255)

                           taCCGTACTTCACCGTCATTAATGCTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCa                                                              <  1:2505882/93‑1 (MQ=255)

                           taCCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCa                                                              >  2:3406427/1‑93 (MQ=255)

                            aCCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCAc                                                             >  1:1304995/1‑93 (MQ=255)

                            aCCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCAc                                                             >  1:4546622/1‑93 (MQ=255)

                            aCCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCAc                                                             >  1:4968116/1‑93 (MQ=255)

                             ccGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACg                                                            <  1:476077/93‑1 (MQ=255)

                             ccGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACg                                                            >  1:1856198/1‑93 (MQ=255)

                             ccGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACg                                                            <  1:4252130/93‑1 (MQ=255)

                             ccGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACg                                                            >  2:2884550/1‑93 (MQ=255)

                              cGTACTTCAACGTCATTAATACTTCCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACgg                                                           <  1:299938/93‑1 (MQ=255)

                               gTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGt                                                          >  1:5450804/1‑93 (MQ=255)

                                 aCTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGttt                                                        <  1:3593028/93‑1 (MQ=255)

                                  cTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTc                                                       <  1:3815803/93‑1 (MQ=255)

                                     cAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATc                                                    <  2:2803951/93‑1 (MQ=255)

                                      aaCGTCATTAATACTTCCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATcc                                                   <  2:4251521/93‑1 (MQ=255)

                                       aCGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCa                                                  >  1:3187608/1‑93 (MQ=255)

                                         gTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTTACCACGGTTTCATCCAGt                                                <  2:302389/93‑1 (MQ=255)

                                         gTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGt                                                >  2:1286762/1‑93 (MQ=255)

                                          tCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGtt                                               >  2:5672422/1‑93 (MQ=255)

                                           cATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTc                                              >  1:1513169/1‑93 (MQ=255)

                                           aaTTAATCCTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTc                                              <  2:4133128/92‑1 (MQ=255)

                                            aTTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCa                                             <  1:5935067/93‑1 (MQ=255)

                                             ttAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCaa                                            >  1:3430602/1‑93 (MQ=255)

                                                aTACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACAt                                         >  2:6244042/1‑93 (MQ=255)

                                                 tACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACAtt                                        >  1:605078/1‑93 (MQ=255)

                                                  aCTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTa                                       <  1:2105557/93‑1 (MQ=255)

                                                    tttCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATc                                     >  2:1139622/1‑93 (MQ=255)

                                                     ttCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCt                                    >  2:122636/1‑93 (MQ=255)

                                                     ttCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCt                                    <  2:1772824/93‑1 (MQ=255)

                                                     ttCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCt                                    >  2:5092598/1‑93 (MQ=255)

                                                     tccccGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCt                                    <  2:4562335/91‑1 (MQ=255)

                                                      tCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTg                                   >  1:2815596/1‑93 (MQ=255)

                                                       cccGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGc                                  <  1:265881/93‑1 (MQ=255)

                                                        ccgccgATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACCTTATCTGCa                                 >  2:774907/1‑93 (MQ=255)

                                                        ccgccgATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCa                                 >  2:2419807/1‑93 (MQ=255)

                                                         cgccgATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCaa                                <  2:192212/93‑1 (MQ=255)

                                                         cgccgATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCaa                                >  1:3381149/1‑93 (MQ=255)

                                                         cgacgATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCaa                                <  2:3502844/90‑1 (MQ=255)

                                                          gccgATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAg                               <  2:2771259/93‑1 (MQ=255)

                                                           ccgATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAgg                              <  1:4172219/93‑1 (MQ=255)

                                                           ccgATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAgg                              >  1:2238976/1‑93 (MQ=255)

                                                            cgATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAggg                             >  1:5173170/1‑93 (MQ=255)

                                                            cgATTTGTGCATTAAATGTTGCTCTGGCAACAGCAACGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAggg                             >  1:6116207/1‑93 (MQ=255)

                                                             gATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGa                            >  1:1751228/1‑93 (MQ=255)

                                                             gATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGa                            >  2:2852711/1‑93 (MQ=255)

                                                             gATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGa                            >  2:1615666/1‑93 (MQ=255)

                                                             gATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGa                            >  2:2491961/1‑93 (MQ=255)

                                                              aTTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGaa                           >  1:5379942/1‑93 (MQ=255)

                                                                ttGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAAtt                         >  1:1364230/1‑93 (MQ=255)

                                                                 tgtgCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTc                        >  2:5274575/1‑93 (MQ=255)

                                                                   tgCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTcgc                      <  1:1215392/93‑1 (MQ=255)

                                                                   tgCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTcgc                      <  1:1009682/93‑1 (MQ=255)

                                                                   tgCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTcgc                      <  2:263878/93‑1 (MQ=255)

                                                                    gCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTcgcg                     >  1:903331/1‑93 (MQ=255)

                                                                     cATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGt                    >  2:3946858/1‑93 (MQ=255)

                                                                      aTTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGtt                   <  1:4032147/93‑1 (MQ=255)

                                                                       ttAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTa                  >  1:3262332/1‑93 (MQ=255)

                                                                          aaTGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAaga               <  2:375990/93‑1 (MQ=255)

                                                                           aTGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAagag              <  1:4367058/93‑1 (MQ=255)

                                                                             gTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCa            >  2:3900345/1‑93 (MQ=255)

                                                                                gCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAaca         <  1:2569080/93‑1 (MQ=255)

                                                                                gCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAaca         >  1:3615958/1‑93 (MQ=255)

                                                                                gCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAaca         >  1:929585/1‑93 (MQ=255)

                                                                                  tctGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACg       <  2:6188240/93‑1 (MQ=255)

                                                                                    tGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGt     <  2:139836/93‑1 (MQ=255)

                                                                                    tGGAAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGt     <  2:1039221/93‑1 (MQ=255)

                                                                                     ggCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGtt    <  1:5812700/93‑1 (MQ=255)

                                                                                     ggCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGtt    <  2:3817836/93‑1 (MQ=255)

                                                                                     ggCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGtt    <  2:4320902/93‑1 (MQ=255)

                                                                                      gCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGttt   <  2:3255141/93‑1 (MQ=255)

                                                                                       cAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGtttt  <  2:5379516/93‑1 (MQ=255)

CAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTT  >  NC_000913/1587071‑1587250

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`