Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,598,927 T→C L113L (TTA→TTG ydeW ← putative transcriptional regulator, sorC family

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,598,9270TC99.5% 617.9 / NA 189L113L (TTA→TTGydeWputative transcriptional regulator, sorC family
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base C (92/96);  total (93/96)
Fisher's exact test for biased strand distribution p-value = 4.92e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 191 total aligned reads displayed.

TGCTGTGACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGTAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATGTTGCAG  >  NC_000913/1598838‑1599016
                                                                                         |                                                                                         
 gCTGTGACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAAc                                                                                       <  1:1336136/93‑1 (MQ=255)
  cTGTGACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACt                                                                                      >  1:5819980/1‑93 (MQ=255)
  cTGTGACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACt                                                                                      <  2:5003065/93‑1 (MQ=255)
   tgtgACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACtc                                                                                     >  2:2100078/1‑93 (MQ=255)
    gtgACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACtca                                                                                    >  2:5385422/1‑93 (MQ=255)
    gtgACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACtca                                                                                    <  2:2579692/93‑1 (MQ=255)
     tgACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACtcat                                                                                   <  1:4374617/93‑1 (MQ=255)
      gACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACtcatc                                                                                  <  2:2171031/93‑1 (MQ=255)
      gACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACtcatc                                                                                  >  2:4831770/1‑93 (MQ=255)
      gACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACtcatc                                                                                  >  1:3804286/1‑93 (MQ=255)
      gACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACtcatc                                                                                  >  2:2750438/1‑93 (MQ=255)
        cGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCaa                                                                                <  1:4959088/93‑1 (MQ=255)
        cGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCaa                                                                                >  2:3881718/1‑93 (MQ=255)
         gAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAAc                                                                               <  1:3750841/93‑1 (MQ=255)
          aaaTAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACa                                                                              >  1:2246120/1‑93 (MQ=255)
          aaaTAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACa                                                                              <  2:3679537/93‑1 (MQ=255)
           aaTAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACat                                                                             <  1:1470751/93‑1 (MQ=255)
            aTAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACata                                                                            <  1:5729491/93‑1 (MQ=255)
            aTAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACata                                                                            <  2:2914094/93‑1 (MQ=255)
              aaaaCCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATg                                                                          <  1:1048849/93‑1 (MQ=255)
                aaCCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATgcg                                                                        <  2:303943/93‑1 (MQ=255)
                 aCCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATgcgc                                                                       <  2:4070472/93‑1 (MQ=255)
                 aCCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATgcgc                                                                       >  1:4710313/1‑93 (MQ=255)
                   cACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATgcgccg                                                                     <  1:2545827/93‑1 (MQ=255)
                     cTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATgcgacgcg                                                                   >  1:976077/1‑93 (MQ=255)
                      ttAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATgcgccgcgc                                                                  >  2:3270727/1‑93 (MQ=255)
                       tAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATgcgccgcgcc                                                                 >  2:4512018/1‑93 (MQ=255)
                       tAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATgcgccgcgcc                                                                 >  1:1575032/1‑93 (MQ=255)
                        aaGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCt                                                                <  2:94855/93‑1 (MQ=255)
                         aGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTa                                                               <  1:1705263/93‑1 (MQ=255)
                         aGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTa                                                               <  1:6196663/93‑1 (MQ=255)
                          gCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTAt                                                              >  2:5081531/1‑93 (MQ=255)
                          gCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTAt                                                              >  1:2225285/1‑93 (MQ=255)
                          gCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTAt                                                              >  1:2476668/1‑93 (MQ=255)
                            gTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATcc                                                            >  2:3496077/1‑93 (MQ=255)
                              tGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATcccc                                                          <  1:113744/93‑1 (MQ=255)
                              tGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATcccc                                                          <  1:3094180/93‑1 (MQ=255)
                              tGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATcccc                                                          <  1:2873473/93‑1 (MQ=255)
                               gCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCa                                                         >  2:3317242/1‑93 (MQ=255)
                               gCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCa                                                         >  1:2145289/1‑93 (MQ=255)
                               gCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCa                                                         <  1:1755198/93‑1 (MQ=255)
                                 aGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGt                                                       <  1:5212205/93‑1 (MQ=255)
                                 aGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGt                                                       >  2:2104051/1‑93 (MQ=255)
                                 aGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGt                                                       <  2:4127371/93‑1 (MQ=255)
                                  gCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTc                                                      <  2:5619422/93‑1 (MQ=255)
                                    gTATTCATGGTTGCCTCGCCAAAACCAATCGCCCGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGc                                                    >  1:3600061/1‑93 (MQ=255)
                                     tATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGcc                                                   >  1:506243/1‑93 (MQ=255)
                                     tATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGcc                                                   >  1:3285094/1‑93 (MQ=255)
                                     tATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACAGATGCGCCGCGCCTATCCCCAGTCGcc                                                   <  2:5526382/93‑1 (MQ=255)
                                      aTTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGccc                                                  <  1:5944759/93‑1 (MQ=255)
                                       ttCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCa                                                 >  2:5135847/1‑93 (MQ=255)
                                        tCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCAc                                                >  2:5266358/1‑93 (MQ=255)
                                         cATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCAcc                                               >  2:3978254/1‑93 (MQ=255)
                                           tGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGa                                             <  1:1441574/93‑1 (MQ=255)
                                           tGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGa                                             <  1:5286052/93‑1 (MQ=255)
                                           tGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGa                                             >  1:6155567/1‑93 (MQ=255)
                                            ggTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCgcc                                            >  1:3540789/1‑91 (MQ=255)
                                             gTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACa                                           <  2:778995/93‑1 (MQ=255)
                                             gTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACa                                           <  2:4798673/93‑1 (MQ=255)
                                                  cTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGc                                      <  1:4119610/93‑1 (MQ=255)
                                                     gCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATc                                   <  1:5461013/93‑1 (MQ=255)
                                                      ccAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATcc                                  <  2:4176124/93‑1 (MQ=255)
                                                       cAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCg                                 >  2:2260802/1‑93 (MQ=255)
                                                        aaaaCCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGc                                >  2:5648257/1‑93 (MQ=255)
                                                          aaCCAATCGCCAGCATCTGTTGTGTTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCaa                              <  2:3253695/93‑1 (MQ=255)
                                                           aCCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAg                             <  1:5371336/93‑1 (MQ=255)
                                                           aCCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAg                             <  2:316014/93‑1 (MQ=255)
                                                            ccAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGc                            >  2:1298490/1‑93 (MQ=255)
                                                             cAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGcc                           <  1:1173617/93‑1 (MQ=255)
                                                             cAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGcc                           >  1:2567930/1‑93 (MQ=255)
                                                             cAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGcc                           >  2:2539853/1‑93 (MQ=255)
                                                              aaTCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGccc                          >  1:363803/1‑93 (MQ=255)
                                                               aTCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCa                         <  2:452478/93‑1 (MQ=255)
                                                                tCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAg                        <  2:6172811/93‑1 (MQ=255)
                                                                 cGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAgg                       <  2:1370968/93‑1 (MQ=255)
                                                                  gCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCACGCCCAggg                      >  2:5176738/1‑93 (MQ=255)
                                                                  gCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAggg                      <  1:4505905/93‑1 (MQ=255)
                                                                  gCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAggg                      >  2:3697374/1‑93 (MQ=255)
                                                                   ccAGAATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGa                     >  2:1123827/1‑93 (MQ=255)
                                                                    cAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGAt                    >  2:321638/1‑93 (MQ=255)
                                                                     aGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATc                   >  1:3625641/1‑93 (MQ=255)
                                                                     aGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATc                   >  2:1262509/1‑93 (MQ=255)
                                                                     aGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATc                   <  2:334827/93‑1 (MQ=255)
                                                                       cATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCAc                 <  1:4364876/93‑1 (MQ=255)
                                                                         tCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGGTCGccc               >  1:1557800/1‑93 (MQ=255)
                                                                         tCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCAccc               >  2:3640871/1‑93 (MQ=255)
                                                                         tCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGCGATCAccc               >  1:2376166/1‑93 (MQ=255)
                                                                          cTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCg              <  1:5574440/93‑1 (MQ=255)
                                                                           tgttgtGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCgg             >  2:3448586/1‑93 (MQ=255)
                                                                           tgttgtGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCgg             >  2:1602462/1‑93 (MQ=255)
                                                                            gttgtGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGa            <  2:3580981/93‑1 (MQ=255)
                                                                            gttgtGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGa            >  2:674917/1‑93 (MQ=255)
                                                                            gttgtGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGa            >  1:4898370/1‑93 (MQ=255)
                                                                                tgGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATg        <  1:5183569/93‑1 (MQ=255)
                                                                                  gTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATGtt      >  2:1497774/1‑93 (MQ=255)
                                                                                  gTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATGtt      <  1:912064/93‑1 (MQ=255)
                                                                                  gTTGAAGCAAACTCATCAACATATGCGCCGCGCCTACCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCCCCCGGACATGtt      <  2:1827126/93‑1 (MQ=255)
                                                                                   ttGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATGTTg     <  1:5103944/93‑1 (MQ=255)
                                                                                     gAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATGTTGCa   <  2:4781673/93‑1 (MQ=255)
                                                                                      aaGCAAACTCATCAATATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATGTTGCAg  >  2:3968542/1‑93 (MQ=255)
                                                                                         |                                                                                         
TGCTGTGACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGTAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATGTTGCAG  >  NC_000913/1598838‑1599016

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: