BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,612,901	T→C	V25A (GTG→GCG)	yneJ →	putative transcriptional regulator LYSR‑type

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,612,901	0	T	C	100.0%	639.3 / NA	200	V25A (GTG→GCG)	yneJ	putative transcriptional regulator LYSR‑type
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (107/93); total (107/93)

Only 100 of 207 total aligned reads displayed.

CACGAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGTGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAGCGTT  >  NC_000913/1612811‑1612990

cACGAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAgcgc                                                                                         >  1:4549159/1‑93 (MQ=255)

 aCGAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCa                                                                                        <  2:3088118/93‑1 (MQ=255)

 aCGAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCa                                                                                        <  1:3674554/93‑1 (MQ=255)

  cGAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCAt                                                                                       <  1:3040024/93‑1 (MQ=255)

   gAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATc                                                                                      <  2:197633/93‑1 (MQ=255)

   gAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATc                                                                                      <  1:2781082/93‑1 (MQ=255)

   gAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATc                                                                                      >  2:4920610/1‑93 (MQ=255)

      tCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATcgcg                                                                                   >  1:1007361/1‑93 (MQ=255)

       cGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGt                                                                                  >  1:1860871/1‑93 (MQ=255)

        gagaATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTg                                                                                 >  1:2194024/1‑93 (MQ=255)

        gagaATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTg                                                                                 >  1:4059581/1‑93 (MQ=255)

         agaATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGc                                                                                >  1:5810119/1‑93 (MQ=255)

           aaTGCTATGGATCTGACCCAACTGGAGATGTACAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCg                                                                              >  2:5040390/1‑93 (MQ=255)

             tGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTc                                                                            <  2:4208612/93‑1 (MQ=255)

             tGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTc                                                                            >  2:4992483/1‑93 (MQ=255)

               cTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGa                                                                          >  1:5644990/1‑93 (MQ=255)

                tATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGaa                                                                         >  1:676225/1‑93 (MQ=255)

                tATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGaa                                                                         >  1:966443/1‑93 (MQ=255)

                tATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGaa                                                                         >  1:5459217/1‑93 (MQ=255)

                 aTGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAAt                                                                        >  1:2204153/1‑93 (MQ=255)

                 aTGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAAt                                                                        >  2:5724162/1‑93 (MQ=255)

                  tGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAAtc                                                                       >  2:2584326/1‑93 (MQ=255)

                  tGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAAtc                                                                       <  2:4250375/93‑1 (MQ=255)

                  tGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAAtc                                                                       >  1:4690705/1‑93 (MQ=255)

                    gATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAAtctc                                                                     <  2:3932092/93‑1 (MQ=255)

                    gATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAAtctc                                                                     >  1:5743800/1‑93 (MQ=255)

                       cTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACt                                                                  <  2:3027860/93‑1 (MQ=255)

                         gACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTAc                                                                >  1:5026268/1‑93 (MQ=255)

                         gACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTAc                                                                >  2:2116133/1‑93 (MQ=255)

                         gACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTAc                                                                >  1:4314732/1‑93 (MQ=255)

                          aCCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTAcc                                                               >  2:2643540/1‑93 (MQ=255)

                          aCCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTAcc                                                               <  1:5629824/93‑1 (MQ=255)

                            ccAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCg                                                             >  2:4541002/1‑93 (MQ=255)

                             cAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGt                                                            <  1:5519410/93‑1 (MQ=255)

                             cAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGt                                                            >  1:132213/1‑93 (MQ=255)

                             cAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGt                                                            >  2:6204256/1‑93 (MQ=255)

                              aaCTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTc                                                           <  1:5569238/93‑1 (MQ=255)

                              aaCTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTc                                                           <  1:5084692/93‑1 (MQ=255)

                               aCTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCt                                                          >  2:1273787/1‑93 (MQ=255)

                                cTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTg                                                         <  2:2950568/93‑1 (MQ=255)

                                   gagaTGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTgcgc                                                      >  2:2853074/1‑93 (MQ=255)

                                     gaTGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCa                                                    >  1:188196/1‑93 (MQ=255)

                                     gaTGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCa                                                    >  2:2278227/1‑93 (MQ=255)

                                        gTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCt                                                 <  1:4407569/93‑1 (MQ=255)

                                          tCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTgg                                               >  1:5652808/1‑93 (MQ=255)

                                           cAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGa                                              <  2:6000954/93‑1 (MQ=255)

                                            aaCGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGaa                                             >  1:2660/1‑93 (MQ=255)

                                             aCGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGaaa                                            >  1:4207886/1‑93 (MQ=255)

                                                 ggTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGa                                        <  2:3632969/93‑1 (MQ=255)

                                                 ggTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGa                                        <  2:1326955/93‑1 (MQ=255)

                                                 ggTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGa                                        >  2:1938570/1‑93 (MQ=255)

                                                  gTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGaa                                       >  2:4716626/1‑93 (MQ=255)

                                                  gTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGaa                                       >  2:710360/1‑93 (MQ=255)

                                                  gTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGaa                                       <  1:2301249/93‑1 (MQ=255)

                                                   ttGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAAc                                      <  2:4328912/93‑1 (MQ=255)

                                                   ttGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAAc                                      <  2:1005130/93‑1 (MQ=255)

                                                   ttGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAAc                                      <  1:491151/93‑1 (MQ=255)

                                                    tGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACt                                     >  2:5838630/1‑93 (MQ=255)

                                                     gCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTg                                    >  2:1876232/1‑93 (MQ=255)

                                                      ccGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTgg                                   >  2:2981680/1‑93 (MQ=255)

                                                       cGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCACCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTggg                                  <  1:2484752/93‑1 (MQ=255)

                                                        gAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTgggg                                 >  2:1688443/1‑93 (MQ=255)

                                                        gAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTgggg                                 >  1:1758978/1‑93 (MQ=255)

                                                         aaGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTggggg                                <  1:194839/93‑1 (MQ=255)

                                                         aaGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTggggg                                >  2:2681175/1‑93 (MQ=255)

                                                             tGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGa                            >  1:2569023/1‑93 (MQ=255)

                                                              ggCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGAt                           <  2:1120119/93‑1 (MQ=255)

                                                               gcagcaTAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATc                          <  2:3812339/93‑1 (MQ=255)

                                                                cagcaTAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCt                         <  1:6254476/93‑1 (MQ=255)

                                                                cagcaTAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGGTGATCt                         >  1:3547749/1‑93 (MQ=255)

                                                                  gcaTAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGt                       <  2:5209090/93‑1 (MQ=255)

                                                                    aTAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGttt                     <  1:2638618/93‑1 (MQ=255)

                                                                    aTAACCCAGGCTGCAGCAAAAGCGCATCGCGGGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGTTTGATCTGtta                     <  2:496291/93‑2 (MQ=255)

                                                                     tAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTa                    <  1:4283173/93‑1 (MQ=255)

                                                                     tAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTa                    <  1:5379442/93‑1 (MQ=255)

                                                                       aCCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTAtt                  >  1:1553260/1‑93 (MQ=255)

                                                                       aCCCAGGCTGCAGCAAAAGCGCATAGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTAtt                  <  1:6307657/93‑1 (MQ=255)

                                                                        cccAGGCTGCAGCAAAAGCGCATCGTGTGCCGTCGAATCTCACTACCCGTCTGCCCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTc                 <  1:4623897/93‑1 (MQ=255)

                                                                        cccAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTc                 <  2:5523994/93‑1 (MQ=255)

                                                                        cccAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTc                 <  1:3154671/93‑1 (MQ=255)

                                                                         ccAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTcg                <  2:3859653/93‑1 (MQ=255)

                                                                         ccAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTcg                >  1:2928399/1‑93 (MQ=255)

                                                                          cAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTcgc               <  1:6129656/93‑1 (MQ=255)

                                                                           aGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTcgcg              >  2:773181/1‑93 (MQ=255)

                                                                            ggCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCga             <  2:223993/93‑1 (MQ=255)

                                                                            ggCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCga             <  2:4840981/93‑1 (MQ=255)

                                                                            ggCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCga             >  1:3869774/1‑93 (MQ=255)

                                                                            ggCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCga             >  2:2447631/1‑93 (MQ=255)

                                                                              cTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCgaga           >  1:3798196/1‑93 (MQ=255)

                                                                              cTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCgaga           >  1:5204195/1‑93 (MQ=255)

                                                                                 cagcaAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATc        <  2:4429269/93‑1 (MQ=255)

                                                                                 cagcaAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATc        <  2:5854880/93‑1 (MQ=255)

                                                                                 cagcaAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATc        <  2:5386561/93‑1 (MQ=255)

                                                                                 cagcaAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATc        <  2:5652808/93‑1 (MQ=255)

                                                                                   gcaAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAg      >  2:1100950/1‑93 (MQ=255)

                                                                                   gcaAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAg      >  2:3819602/1‑93 (MQ=255)

                                                                                   gcaAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAg      >  2:3352425/1‑93 (MQ=255)

                                                                                    caAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAGc     <  2:2343363/93‑1 (MQ=255)

                                                                                     aaaaGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAGCg    >  2:510381/1‑93 (MQ=255)

                                                                                      aaaGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAGCGt   <  1:1103615/93‑1 (MQ=255)

CACGAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGTGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAGCGTT  >  NC_000913/1612811‑1612990

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`