BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,621,746	T→C	I43M (ATA→ATG)	ydeH ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,621,746	0	T	C	100.0%	759.1 / NA	231	I43M (ATA→ATG)	ydeH	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (123/108); total (123/108)

Only 100 of 238 total aligned reads displayed.

CCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATT  >  NC_000913/1621656‑1621835

  gAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCAttt                                                                                       >  2:3577822/1‑93 (MQ=255)

   aaCGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTc                                                                                      >  2:5672030/1‑93 (MQ=255)

    aCGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCt                                                                                     >  2:2428455/1‑93 (MQ=255)

    aCGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCt                                                                                     >  2:6090002/1‑93 (MQ=255)

      gTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTgg                                                                                   >  1:6206442/1‑93 (MQ=255)

      gTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTgg                                                                                   >  2:5926507/1‑93 (MQ=255)

      gTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAAACGGCACAGCGCATAAGAATGGTTATCACACATTTCTgg                                                                                   >  2:6281411/1‑93 (MQ=255)

       tAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGc                                                                                  <  2:884644/93‑1 (MQ=255)

       tAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGc                                                                                  >  2:5368340/1‑93 (MQ=255)

         aGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCtt                                                                                >  1:3055190/1‑93 (MQ=255)

          ggTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTa                                                                               >  1:1614685/1‑93 (MQ=255)

          ggTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTa                                                                               >  2:2159413/1‑93 (MQ=255)

           gTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTAc                                                                              >  1:1661177/1‑93 (MQ=255)

           gTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTAc                                                                              <  2:5090633/93‑1 (MQ=255)

            tAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACt                                                                             >  1:432757/1‑93 (MQ=255)

            tAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACt                                                                             <  1:384499/93‑1 (MQ=255)

            tAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACt                                                                             <  1:3804702/93‑1 (MQ=255)

                tCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCa                                                                         <  1:1542347/93‑1 (MQ=255)

                 cATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCAt                                                                        >  2:3873893/1‑93 (MQ=255)

                  aTCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCAtc                                                                       >  1:2562559/1‑93 (MQ=255)

                  aTCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCAtc                                                                       <  2:5763944/93‑1 (MQ=255)

                  aTCGTTATCGAGTGGCCCAAGATGATCAATCCACCGACCAAACGGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCAtc                                                                       <  2:5032895/93‑1 (MQ=255)

                    cGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCAtctc                                                                     <  2:774655/93‑1 (MQ=255)

                      ttATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCAtctctc                                                                   <  1:6013091/93‑1 (MQ=255)

                      atATCGAGTGGCCCCAGATGAACAATATACCGCACAAACATGCACAGCACATCAGAATGTATATACAACATTACTGTCTTATTGGCAtcacta                                                                   >  2:2135995/2‑92 (MQ=255)

                       tATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTcg                                                                  <  2:5206647/93‑1 (MQ=255)

                         tCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTcgcg                                                                >  2:822503/1‑93 (MQ=255)

                          cGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGa                                                               >  1:2510208/1‑93 (MQ=255)

                           gAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGAc                                                              >  2:2059464/1‑93 (MQ=255)

                           gAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGAc                                                              >  1:224149/1‑93 (MQ=255)

                            aGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGAcc                                                             >  1:28273/1‑93 (MQ=255)

                             gTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCa                                                            <  2:4411111/93‑1 (MQ=255)

                             gTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCa                                                            >  1:201711/1‑93 (MQ=255)

                              tGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCAc                                                           <  2:873233/93‑1 (MQ=255)

                              tGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCAc                                                           >  1:1114489/1‑93 (MQ=255)

                              tGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCAc                                                           >  1:3545499/1‑93 (MQ=255)

                                gCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGc                                                         <  2:2720388/93‑1 (MQ=255)

                                  cccAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCtg                                                       <  2:3932843/93‑1 (MQ=255)

                                   ccAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCtgt                                                      >  1:1425824/1‑93 (MQ=255)

                                   ccAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCtgt                                                      <  1:5075508/93‑1 (MQ=255)

                                   ccAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCtgt                                                      <  2:5732205/93‑1 (MQ=255)

                                         gatCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACa                                                <  1:183776/93‑1 (MQ=255)

                                         gatCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACa                                                <  2:3105540/93‑1 (MQ=255)

                                         gatCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACa                                                >  1:4053269/1‑93 (MQ=255)

                                          atCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACAt                                               <  1:532660/93‑1 (MQ=255)

                                          atCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACAt                                               >  2:5878358/1‑93 (MQ=255)

                                              aTCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTc                                           >  2:4223775/1‑93 (MQ=255)

                                               tCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCa                                          <  1:3257682/93‑1 (MQ=255)

                                               tCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCa                                          <  2:3524713/93‑1 (MQ=255)

                                               tCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCa                                          >  1:1792036/1‑93 (MQ=255)

                                                 cACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCAcc                                        <  2:1953376/93‑1 (MQ=255)

                                                 cACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCAcc                                        <  1:5896260/93‑1 (MQ=255)

                                                  aCCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCa                                       >  2:131679/1‑93 (MQ=255)

                                                  aCCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCa                                       >  2:4292033/1‑93 (MQ=255)

                                                    cGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGc                                     <  1:5495949/93‑1 (MQ=255)

                                                    cGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGc                                     >  2:5128796/1‑93 (MQ=255)

                                                      aCCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCa                                   <  2:6028493/93‑1 (MQ=255)

                                                       ccAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATa                                              <  1:2944296/81‑1 (MQ=255)

                                                        cAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACt                                 <  2:3992395/93‑1 (MQ=255)

                                                         aaaCTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTg                                >  1:3004625/1‑93 (MQ=255)

                                                          aaCTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTgg                               <  1:3466819/93‑1 (MQ=255)

                                                          aaCTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTgg                               <  1:4883820/93‑1 (MQ=255)

                                                             tGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAg                            >  1:3904842/1‑93 (MQ=255)

                                                              ggCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCGTCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGt                           >  2:1463566/1‑93 (MQ=255)

                                                               gCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTg                          <  2:3387779/93‑1 (MQ=255)

                                                                 acaGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTggg                        >  1:2666886/1‑93 (MQ=255)

                                                                  caGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGc                       <  2:6183737/93‑1 (MQ=255)

                                                                   aGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCa                      >  2:1718748/1‑93 (MQ=255)

                                                                    gTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCAt                     <  2:5113962/93‑1 (MQ=255)

                                                                     tCCAGAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATc                    <  1:882060/93‑1 (MQ=255)

                                                                      ccATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCg                   <  2:296101/93‑1 (MQ=255)

                                                                        aTAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCgct                 >  2:1181334/1‑91 (MQ=255)

                                                                        aTAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGAt                 >  1:1439417/1‑93 (MQ=255)

                                                                         tAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATa                >  1:419337/1‑93 (MQ=255)

                                                                            gAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGcc             >  2:5496864/1‑93 (MQ=255)

                                                                            gAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGcc             >  2:3284968/1‑93 (MQ=255)

                                                                            gAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGcc             >  2:5798145/1‑93 (MQ=255)

                                                                            gAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGcc             >  1:2318272/1‑93 (MQ=255)

                                                                             aaTGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCGCGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCt            <  2:2461490/93‑1 (MQ=255)

                                                                             aaTGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCt            <  1:104254/93‑1 (MQ=255)

                                                                             aaTGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCt            >  2:2306247/1‑93 (MQ=255)

                                                                              aTGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCtt           <  1:781141/93‑1 (MQ=255)

                                                                              aTGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCtt           >  2:3659194/1‑93 (MQ=255)

                                                                               tGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTa          >  2:4912204/1‑93 (MQ=255)

                                                                               tGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTa          >  2:3173017/1‑93 (MQ=255)

                                                                                ggTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTAt         <  1:4114569/93‑1 (MQ=255)

                                                                                ggTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTAt         <  1:5371970/93‑1 (MQ=255)

                                                                                 gTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTAtt        <  1:3398777/93‑1 (MQ=255)

                                                                                  ttATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGGCCACGCTGTGAAACATACTCGCCAGCCACTGGTAGTGGGCATCGATAGCCTTATTg       <  2:4170687/93‑1 (MQ=255)

                                                                                   tATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTga      <  1:440554/93‑1 (MQ=255)

                                                                                    aTCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTgag     >  1:3690716/1‑93 (MQ=255)

                                                                                    aTCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTgag     <  2:728719/93‑1 (MQ=255)

                                                                                     tCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTgaga    >  1:3216806/1‑93 (MQ=255)

                                                                                     tCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTgaga    <  1:5522275/93‑1 (MQ=255)

                                                                                     tCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTgaga    <  1:5170359/93‑1 (MQ=255)

                                                                                      ccGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGAt   >  1:3598509/1‑93 (MQ=255)

                                                                                      ccGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGAt   >  1:5249981/1‑93 (MQ=255)

                                                                                      ccGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGAt   >  1:4700260/1‑93 (MQ=255)

                                                                                      ccGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGAt   <  1:1259637/93‑1 (MQ=255)

                                                                                      ccGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGAt   >  1:462370/1‑93 (MQ=255)

CCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATT  >  NC_000913/1621656‑1621835

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`