BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,689,391	G→A	intergenic (+7/+219)	ydgA → / ← uidC	hypothetical protein/membrane‑associated protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,689,391	0	G	A	100.0%	697.1 / NA	187	intergenic (+7/+219)	ydgA/uidC	hypothetical protein/membrane‑associated protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (89/98); total (89/98)

Only 100 of 189 total aligned reads displayed.

AAAATGTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTT  >  NC_000913/1689301‑1689480

 aaaTGTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCa                                                                                        <  1:1967346/93‑1 (MQ=255)

   aTGTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCaaa                                                                                      <  2:1560703/93‑1 (MQ=255)

    tGTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCaaaa                                                                                     >  2:57868/1‑93 (MQ=255)

     gTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAAc                                                                                    <  1:5539738/93‑1 (MQ=255)

     gTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAAc                                                                                    <  2:2296985/93‑1 (MQ=255)

       cGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGc                                                                                  <  1:901412/93‑1 (MQ=255)

       cGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGc                                                                                  >  1:3431682/1‑93 (MQ=255)

          tAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCgg                                                                               >  1:1529016/1‑93 (MQ=255)

          tAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCgg                                                                               >  2:2516278/1‑93 (MQ=255)

              agaTTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGaa                                                                           <  2:1662303/93‑1 (MQ=255)

               gaTTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAAt                                                                          >  2:100003/1‑93 (MQ=255)

                aTTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAAtt                                                                         <  1:62912/93‑1 (MQ=255)

                aTTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAAtt                                                                         >  2:5967428/1‑93 (MQ=255)

                 ttttGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAAttt                                                                        >  2:5154448/1‑93 (MQ=255)

                  tttGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAAtttt                                                                       >  2:1406215/1‑93 (MQ=255)

                    tgttgGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCa                                                                     <  2:1391630/93‑1 (MQ=255)

                     gttgGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCAc                                                                    <  1:1046407/93‑1 (MQ=255)

                     gttgGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCAc                                                                    >  1:530690/1‑93 (MQ=255)

                      ttgGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACt                                                                   >  1:6191554/1‑93 (MQ=255)

                       tgGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTc                                                                  <  1:5428724/93‑1 (MQ=255)

                        ggCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTcc                                                                 >  1:3212440/1‑93 (MQ=255)

                        ggCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTcc                                                                 <  1:5307394/93‑1 (MQ=255)

                        ggCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTcc                                                                 <  1:4583012/93‑1 (MQ=255)

                        ggCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTcc                                                                 >  1:4019824/1‑93 (MQ=255)

                        ggCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTcc                                                                 <  2:3403582/93‑1 (MQ=255)

                        ggCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTcc                                                                 <  2:373106/93‑1 (MQ=255)

                         gCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCg                                                                >  1:2358054/1‑93 (MQ=255)

                         gCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCg                                                                <  2:1800212/93‑1 (MQ=255)

                          cATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCgg                                                               <  1:5154546/93‑1 (MQ=255)

                           aTGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGc                                                              <  1:4780879/93‑1 (MQ=255)

                            tGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCg                                                             <  2:5393039/93‑1 (MQ=255)

                             gTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGt                                                            >  1:2853788/1‑93 (MQ=255)

                              tttGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGtt                                                           <  2:1900146/93‑1 (MQ=255)

                               ttGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGttt                                                          <  2:722191/93‑1 (MQ=255)

                                 gCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTc                                                        <  2:622332/93‑1 (MQ=255)

                                  cGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCa                                                       >  1:2340602/1‑93 (MQ=255)

                                   gATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCAt                                                      <  2:4232741/93‑1 (MQ=255)

                                    aTGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATc                                                     <  2:4693368/93‑1 (MQ=255)

                                    aTGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATc                                                     >  2:3498953/1‑93 (MQ=255)

                                     tGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCt                                                    >  2:5175848/1‑93 (MQ=255)

                                     tGCCAGCTCTTAACGTTCCGGCTGTACCGGCAAGTCAGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCt                                                    >  1:1165795/1‑93 (MQ=255)

                                      gCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTg                                                   <  1:3760812/93‑1 (MQ=255)

                                       ccAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGa                                                  >  2:4655992/1‑93 (MQ=255)

                                        cAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGaa                                                 <  2:1992684/93‑1 (MQ=255)

                                          gCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGaaaa                                               <  2:246260/93‑1 (MQ=255)

                                          gCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGaaaa                                               >  1:6130970/1‑93 (MQ=255)

                                           ctctTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAaaac                                              >  1:1249280/1‑93 (MQ=255)

                                              ttAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAaaacaaa                                           <  1:3877438/93‑1 (MQ=255)

                                              ttAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAaaacaaa                                           >  2:2801312/1‑93 (MQ=255)

                                              ttAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAaaacaaa                                           >  1:2635816/1‑93 (MQ=255)

                                               tAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAaaacaaac                                          <  1:3309102/93‑1 (MQ=255)

                                                aaCGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAAcc                                         <  1:1761308/93‑1 (MQ=255)

                                                aaCGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAAcc                                         <  1:2178997/93‑1 (MQ=255)

                                                aaCGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAAcc                                         >  2:3329553/1‑93 (MQ=255)

                                                 aCGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCa                                        <  1:5860565/93‑1 (MQ=255)

                                                  cGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCag                                       <  2:254973/93‑1 (MQ=255)

                                                   gTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAGCGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCaga                                      <  2:1539502/93‑1 (MQ=255)

                                                    ttCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCagag                                     >  1:3053376/1‑93 (MQ=255)

                                                    ttCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCagag                                     <  2:1971008/93‑1 (MQ=255)

                                                     tCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAgaga                                    <  1:2468586/93‑1 (MQ=255)

                                                         gCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGc                                <  2:3087127/93‑1 (MQ=255)

                                                         gCTGTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGc                                >  2:4789689/1‑93 (MQ=255)

                                                            gTACCGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTg                             >  1:451439/1‑93 (MQ=255)

                                                               ccGGCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATg                          <  2:3666526/93‑1 (MQ=255)

                                                                  gCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATgcgc                       <  1:5777203/93‑1 (MQ=255)

                                                                  gCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATgcgc                       >  1:3342771/1‑93 (MQ=255)

                                                                  gCAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATgcgc                       <  1:2111152/93‑1 (MQ=255)

                                                                   cAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCt                      <  2:5662779/93‑1 (MQ=255)

                                                                   cAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCt                      <  1:3796005/93‑1 (MQ=255)

                                                                   cAATTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCt                      >  1:2779175/1‑93 (MQ=255)

                                                                    aaTTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTa                     <  1:3668790/93‑1 (MQ=255)

                                                                     aTTCCGCAGCAGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTAc                    >  1:3164823/1‑93 (MQ=255)

                                                                          gcagcaGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTa               >  1:1290146/1‑93 (MQ=255)

                                                                          gcagcaGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTa               >  1:607026/1‑93 (MQ=255)

                                                                          gcagcaGTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGACTGCCTGATGCGCTACGCTTa               <  2:5491463/93‑1 (MQ=255)

                                                                            agcagTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATc             >  2:118978/1‑93 (MQ=255)

                                                                            agcagTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATc             >  2:4036450/1‑93 (MQ=255)

                                                                             gcagTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCa            <  1:1627206/93‑1 (MQ=255)

                                                                             gcagTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCa            <  2:708737/93‑1 (MQ=255)

                                                                             gcagTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCa            >  1:4044899/1‑93 (MQ=255)

                                                                             gcagTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCa            <  1:2757874/93‑1 (MQ=255)

                                                                             gcagTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCa            <  1:1401483/93‑1 (MQ=255)

                                                                              cagTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAg           <  1:4948798/93‑1 (MQ=255)

                                                                              cagTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAg           <  2:2185356/93‑1 (MQ=255)

                                                                              cagTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAg           >  1:5326310/1‑93 (MQ=255)

                                                                              cagTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAg           <  1:838999/93‑1 (MQ=255)

                                                                               agTAATTCACGACCAAAACGTCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAgg          <  1:4203991/93‑1 (MQ=255)

                                                                                gTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGc         <  2:4483706/93‑1 (MQ=255)

                                                                                gTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGc         <  1:402752/93‑1 (MQ=255)

                                                                                gTAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTAATGCGCTACGCTTATCAGGc         <  1:1327936/93‑1 (MQ=255)

                                                                                 tAATTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGcc        >  1:1909685/1‑93 (MQ=255)

                                                                                  aaTTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCt       >  1:257071/1‑93 (MQ=255)

                                                                                   aTTCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTa      <  1:1573129/93‑1 (MQ=255)

                                                                                    ttCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTAc     >  2:3989972/1‑93 (MQ=255)

                                                                                    ttCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTAc     >  2:1687037/1‑93 (MQ=255)

                                                                                    ttCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTAc     <  1:5810849/93‑1 (MQ=255)

                                                                                     tCACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTAcc    <  1:1622266/93‑1 (MQ=255)

                                                                                      cACGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCt   <  1:3326709/93‑1 (MQ=255)

                                                                                       aCGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCtt  <  1:351961/93‑1 (MQ=255)

                                                                                       aCGACCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCtt  >  1:1039395/1‑93 (MQ=255)

AAAATGTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTT  >  NC_000913/1689301‑1689480

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`