BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,689,553	A→G	intergenic (+169/+57)	ydgA → / ← uidC	hypothetical protein/membrane‑associated protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,689,553	0	A	G	100.0%	513.6 / NA	163	intergenic (+169/+57)	ydgA/uidC	hypothetical protein/membrane‑associated protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (86/77); total (86/77)

Only 100 of 171 total aligned reads displayed.

GCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAACGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATACTCA  >  NC_000913/1689463‑1689641

gCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGcg                                                                                        <  2:2339160/93‑1 (MQ=255)

gCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGcg                                                                                        >  2:2879707/1‑93 (MQ=255)

 cTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAgcgc                                                                                       >  1:2588694/1‑93 (MQ=255)

 cTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAgcgc                                                                                       >  2:2797556/1‑93 (MQ=255)

  ttATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGcgcg                                                                                      <  1:2983629/93‑1 (MQ=255)

  ttATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGcgcg                                                                                      <  1:3258677/93‑1 (MQ=255)

     tCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCAc                                                                                   >  2:1653406/1‑93 (MQ=255)

     tCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCAc                                                                                   <  1:2801312/93‑1 (MQ=255)

      cAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACt                                                                                  <  1:3996629/93‑1 (MQ=255)

      cAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACt                                                                                  <  2:1708799/93‑1 (MQ=255)

       aGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACtt                                                                                 <  1:2083093/93‑1 (MQ=255)

        ggCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACttt                                                                                <  2:5422408/93‑1 (MQ=255)

          ccTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGt                                                                              >  1:5237139/1‑93 (MQ=255)

          ccTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGt                                                                              >  2:5302191/1‑93 (MQ=255)

            tACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTca                                                                            >  2:3856904/1‑93 (MQ=255)

             aCCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTcaa                                                                           <  2:3279240/93‑1 (MQ=255)

             aCCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTcaa                                                                           >  2:757725/1‑93 (MQ=255)

              ccTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTcaac                                                                          >  1:5363500/1‑93 (MQ=255)

                ttttCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTcaacaa                                                                        <  1:1046297/93‑1 (MQ=255)

                ttttCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTcaacaa                                                                        >  2:4532782/1‑93 (MQ=255)

                   tCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCt                                                                     <  2:4254154/93‑1 (MQ=255)

                     cTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCACCAATCTGa                                                                   <  2:6130970/93‑1 (MQ=255)

                     cTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGa                                                                   >  1:4295813/1‑93 (MQ=255)

                      tGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCTTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGaa                                                                  <  1:5550302/93‑1 (MQ=255)

                       gCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGaaa                                                                 <  2:2513662/93‑1 (MQ=255)

                       gCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGaaa                                                                 >  2:6068590/1‑93 (MQ=255)

                        cAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAAc                                                                <  2:3454105/93‑1 (MQ=255)

                        cAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAAc                                                                <  2:2635816/93‑1 (MQ=255)

                         aaCACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACg                                                               <  1:1908681/93‑1 (MQ=255)

                         aaCACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACg                                                               >  1:1950210/1‑93 (MQ=255)

                          acacTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGc                                                              >  1:5860003/1‑93 (MQ=255)

                          acacTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGc                                                              <  1:2516278/93‑1 (MQ=255)

                          acacTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGc                                                              <  1:6219028/93‑1 (MQ=255)

                           cacTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGcc                                                             <  1:6119530/93‑1 (MQ=255)

                             cTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCgg                                                           >  1:3788226/1‑93 (MQ=255)

                             cTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCgg                                                           >  2:458939/1‑93 (MQ=255)

                             cTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCgg                                                           >  1:5857646/1‑93 (MQ=255)

                              tttGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGGATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGga                                                          >  1:4086108/1‑93 (MQ=255)

                              tttGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGga                                                          <  1:4622741/93‑1 (MQ=255)

                              tttGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGga                                                          <  2:2358054/93‑1 (MQ=255)

                              tttGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGga                                                          <  1:1159891/93‑1 (MQ=255)

                                tGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGgaga                                                        >  1:2533359/1‑93 (MQ=255)

                                  aaTTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGAtt                                                      <  2:2712989/93‑1 (MQ=255)

                                    tttATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGAtttt                                                    >  2:1495955/1‑93 (MQ=255)

                                    tttATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGAACTTTGTCACCAATTTGAAACGCGGGGGAtttt                                                    >  1:4120910/1‑93 (MQ=18)

                                      tATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTtc                                                  <  1:1038649/93‑1 (MQ=255)

                                       aTGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTtct                                                 >  1:5235754/1‑93 (MQ=255)

                                        tGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTtctc                                                >  1:6273137/1‑93 (MQ=255)

                                        tGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTtctc                                                <  2:2089366/93‑1 (MQ=255)

                                         agtttttttTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCCACAATCTGAAACGCCGGAGATTTTtctct                                               >  2:6178522/4‑93 (MQ=21)

                                          aGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTtctctc                                              <  2:5228104/93‑1 (MQ=255)

                                          aGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTtctctc                                              <  2:78753/93‑1 (MQ=255)

                                            tttttGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCg                                            <  2:1529016/93‑1 (MQ=255)

                                            tttttGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCg                                            <  2:3500135/93‑1 (MQ=255)

                                              tttGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGGTTTTTCTCTCCGGc                                          <  2:3166335/93‑1 (MQ=255)

                                              tttGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGc                                          <  2:2758562/93‑1 (MQ=255)

                                               ttGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCg                                         >  1:1963388/1‑93 (MQ=255)

                                                   aGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGCAACGCCGGAGATTTTTCTCTCCGGCGTTAt                                     >  1:2334404/1‑93 (MQ=255)

                                                   aGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTAt                                     <  1:5626237/93‑1 (MQ=255)

                                                    ggCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTAtt                                    <  2:1039395/93‑1 (MQ=255)

                                                    ggCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTAtt                                    <  2:2779175/93‑1 (MQ=255)

                                                    ggCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTAtt                                    >  2:3893776/1‑93 (MQ=255)

                                                      cTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTAtttt                                  >  2:1909720/1‑93 (MQ=255)

                                                       tGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTAttttt                                 >  1:1897762/1‑93 (MQ=255)

                                                       tGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTAttttt                                 >  2:5613865/1‑93 (MQ=255)

                                                        ggATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTAtttttt                                >  1:1970181/1‑93 (MQ=255)

                                                         gATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTa                               <  1:5967428/93‑1 (MQ=255)

                                                          aTAAGGCGTTTACGCAGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTAc                              <  1:3621466/93‑1 (MQ=255)

                                                           tAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACt                             >  1:2888507/1‑93 (MQ=255)

                                                           tAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACt                             >  2:2067233/1‑93 (MQ=255)

                                                             aGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTc                           >  2:4746535/1‑93 (MQ=255)

                                                             aGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTc                           >  1:4721899/1‑93 (MQ=255)

                                                              ggCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCa                          <  2:3992923/93‑1 (MQ=255)

                                                              ggCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCa                          <  1:1479933/93‑1 (MQ=255)

                                                                cGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGc                        <  2:1968023/93‑1 (MQ=255)

                                                                cGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGc                        <  2:4268103/93‑1 (MQ=255)

                                                                 gTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCa                       <  1:2006557/93‑1 (MQ=255)

                                                                  tttACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCAt                      >  2:5720722/1‑93 (MQ=255)

                                                                  tttACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCAt                      >  2:212600/1‑93 (MQ=255)

                                                                  tttACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCAt                      >  2:4876550/1‑93 (MQ=255)

                                                                  tttACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCAt                      >  2:2193507/1‑93 (MQ=255)

                                                                  tttACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCAt                      >  1:1775616/1‑93 (MQ=255)

                                                                  tttACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACACCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCAt                      >  2:3176038/1‑93 (MQ=255)

                                                                       gccgcATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGt                 <  2:3795418/93‑1 (MQ=255)

                                                                         cgcATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCa               <  1:2090934/93‑1 (MQ=255)

                                                                         cgcATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCa               <  1:4789689/93‑1 (MQ=255)

                                                                          gcATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCAt              >  2:2328040/1‑93 (MQ=255)

                                                                           cATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATa             >  1:4983714/1‑93 (MQ=255)

                                                                             tCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACt           >  2:3674235/1‑93 (MQ=255)

                                                                               cGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGa         <  1:795350/93‑1 (MQ=255)

                                                                                ggCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGaa        <  1:1687037/93‑1 (MQ=255)

                                                                                ggCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGaa        >  2:1817187/1‑93 (MQ=255)

                                                                                ggCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGaa        >  1:3697991/1‑93 (MQ=255)

                                                                                ggCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGaa        >  1:869817/1‑93 (MQ=255)

                                                                                ggCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGaa        <  2:5326310/93‑1 (MQ=255)

                                                                                   aTAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATAc     >  1:2147713/1‑93 (MQ=255)

                                                                                   aTAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATAc     >  1:5675434/1‑93 (MQ=255)

                                                                                   aTAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATAc     >  2:1401466/1‑93 (MQ=255)

                                                                                    tAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATACt    >  2:5806652/1‑93 (MQ=255)

                                                                                    tAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATACt    <  1:5407245/93‑1 (MQ=255)

GCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAACGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATACTCA  >  NC_000913/1689463‑1689641

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`