BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,702,726	T→C	intergenic (‑394/‑247)	b1624 ← / → b1625	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,702,726	0	T	C	100.0%	674.8 / NA	208	intergenic (‑394/‑247)	b1624/b1625	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (78/130); total (78/130)

Only 100 of 218 total aligned reads displayed.

GCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCTGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGT  >  NC_000913/1702636‑1702815

 cgtggcgAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATgccgcc                                                                                        <  2:384473/93‑1 (MQ=255)

 cgtggcgAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATgccgcc                                                                                        <  1:948355/93‑1 (MQ=255)

   tggcgAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCg                                                                                      <  2:4053304/93‑1 (MQ=255)

   tggcgAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCg                                                                                      <  2:2009277/93‑1 (MQ=255)

   tggcgAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTACGGTACAACTCAAATAAGCTCTGCACTTGTGGAGCGACCTGCCGCCCg                                                                                      <  2:6299458/93‑1 (MQ=255)

    ggcgAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGt                                                                                     <  2:1229107/93‑1 (MQ=255)

    ggcgAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGt                                                                                     <  2:2154365/93‑1 (MQ=255)

    ggcgAGCCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGt                                                                                     <  2:5496527/93‑1 (MQ=255)

     gcgAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTc                                                                                    <  1:87255/93‑1 (MQ=255)

      cgAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTcc                                                                                   <  1:1943901/93‑1 (MQ=255)

         gTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCggg                                                                                <  1:1524019/93‑1 (MQ=255)

         gTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCggg                                                                                <  2:4450228/93‑1 (MQ=255)

             caTTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCa                                                                            <  2:5160365/93‑1 (MQ=255)

             caTTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCa                                                                            <  1:2612560/93‑1 (MQ=255)

               ttGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATg                                                                          <  2:2572320/93‑1 (MQ=255)

               ttGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATg                                                                          >  2:5114400/1‑93 (MQ=255)

                 gACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATTCCGCCCGTCCGGGTGCTTGtt                                                                        <  2:1001189/93‑1 (MQ=255)

                   cAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGtttt                                                                      >  2:4781736/1‑93 (MQ=255)

                    aaCTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTc                                                                     <  1:3603790/93‑1 (MQ=255)

                    aaCTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTc                                                                     >  1:776198/1‑93 (MQ=255)

                     aCTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCa                                                                    <  2:635981/93‑1 (MQ=255)

                      cTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCAc                                                                   <  1:4694042/93‑1 (MQ=255)

                       tATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACt                                                                  >  1:2262052/1‑93 (MQ=255)

                         tCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTg                                                                >  2:3124445/1‑93 (MQ=255)

                         tCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTg                                                                >  1:2828353/1‑93 (MQ=255)

                         tCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTg                                                                <  1:1907471/93‑1 (MQ=255)

                         tCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTg                                                                >  2:6274923/1‑93 (MQ=255)

                          cAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGt                                                               <  1:2234735/93‑1 (MQ=255)

                            gCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCg                                                             >  2:1202680/1‑93 (MQ=255)

                            gCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCg                                                             >  1:1251543/1‑93 (MQ=255)

                            gCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCg                                                             <  1:6215202/93‑1 (MQ=255)

                               aCCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGat                                                          >  1:4300623/1‑93 (MQ=255)

                                ccTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGata                                                         <  1:4132836/93‑1 (MQ=255)

                                 cTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGatat                                                        >  2:6183754/1‑93 (MQ=255)

                                  tGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATAtt                                                       <  1:4971407/93‑1 (MQ=255)

                                   gAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTa                                                      <  1:1218647/93‑1 (MQ=255)

                                     aCAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTaaa                                                    <  2:184479/93‑1 (MQ=255)

                                     aCAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTaaa                                                    >  2:4456903/1‑93 (MQ=255)

                                     aCAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTaaa                                                    <  1:5771366/93‑1 (MQ=255)

                                       agagTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAAcc                                                  <  1:659685/93‑1 (MQ=255)

                                       agagTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAAcc                                                  <  2:3337115/93‑1 (MQ=255)

                                        gagTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCa                                                 <  2:2037154/93‑1 (MQ=255)

                                         agTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAg                                                <  2:2484666/93‑1 (MQ=255)

                                            gCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGaa                                             <  1:1597480/93‑1 (MQ=255)

                                              ttCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAAtt                                           >  2:4822107/1‑93 (MQ=255)

                                              ttCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAAtt                                           <  2:4013338/93‑1 (MQ=255)

                                               tCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAAttt                                          <  2:532693/93‑1 (MQ=255)

                                               tCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAAttt                                          <  1:5385401/93‑1 (MQ=255)

                                               tCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCACGTTTTCACTTGTCGGATATTAAACCAGGAAttt                                          >  2:4318727/1‑93 (MQ=255)

                                                 ggTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATttat                                        <  2:1401381/93‑1 (MQ=255)

                                                  gTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATttatt                                       >  1:452518/1‑93 (MQ=255)

                                                   tACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATttatta                                      <  2:2083325/93‑1 (MQ=255)

                                                    acaacaCAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTtattat                                     >  1:1794039/1‑93 (MQ=255)

                                                    acaacaCAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTtattat                                     >  1:2452249/1‑93 (MQ=255)

                                                     caacaCAAGTAAGCTCTGCACTTGTGGAGCGTCATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATc                                    <  2:4950897/93‑1 (MQ=255)

                                                     caacaCAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATc                                    >  1:3288559/1‑93 (MQ=255)

                                                     caacaCAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATc                                    <  2:803199/93‑1 (MQ=255)

                                                      aacaCAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCt                                   <  1:4939153/93‑1 (MQ=255)

                                                      aacaCAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCt                                   >  2:5172662/1‑93 (MQ=255)

                                                      aacaCAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCt                                   <  2:3254371/93‑1 (MQ=255)

                                                       acacAAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCtt                                  <  1:4781103/93‑1 (MQ=255)

                                                        cacaAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTg                                 >  1:5496431/1‑93 (MQ=255)

                                                        cacaAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTg                                 >  2:2898402/1‑93 (MQ=255)

                                                         acaAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGt                                <  1:5038249/93‑1 (MQ=255)

                                                          caAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGtt                               <  2:4267471/93‑1 (MQ=255)

                                                          caAGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGtt                               <  1:2644893/93‑1 (MQ=255)

                                                           aaGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTc                              <  2:4133352/93‑1 (MQ=255)

                                                            aGTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCg                             >  2:4495092/1‑93 (MQ=255)

                                                             gTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGa                            <  1:5126641/93‑1 (MQ=255)

                                                             gTAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGa                            <  1:3900429/93‑1 (MQ=255)

                                                              tAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGAt                           >  2:4623531/1‑93 (MQ=255)

                                                              tAAGCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGAt                           <  1:5288042/93‑1 (MQ=255)

                                                                 gCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGAtgtt                        <  1:6154650/93‑1 (MQ=255)

                                                                 gCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGAtgtt                        >  1:2938099/1‑93 (MQ=255)

                                                                 gCTCTGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGCTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGAtgtt                        >  1:3120246/1‑93 (MQ=255)

                                                                   tctGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGAtgttgt                      >  1:5261944/1‑93 (MQ=255)

                                                                     tGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGttgttg                    >  2:2116114/1‑93 (MQ=255)

                                                                     tGCACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGttgttg                    >  1:1103913/1‑93 (MQ=255)

                                                                       cACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGt                  >  1:3009263/1‑93 (MQ=255)

                                                                       cACTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGt                  <  2:579825/93‑1 (MQ=255)

                                                                        aCTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTg                 >  1:3114349/1‑93 (MQ=255)

                                                                        aCTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTg                 >  2:5880007/1‑93 (MQ=255)

                                                                         cTTGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGa                <  1:3937967/93‑1 (MQ=255)

                                                                         cTTGTGGAGCGACATGCCGACCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGa                >  2:6139736/1‑93 (MQ=255)

                                                                          ttGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGAt               <  2:1056290/93‑1 (MQ=255)

                                                                          ttGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGAt               <  1:5868771/93‑1 (MQ=255)

                                                                          ttGTGGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGAt               >  1:3716803/1‑93 (MQ=255)

                                                                             tgGAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGt            >  2:1717962/1‑93 (MQ=255)

                                                                               gAGCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCa          <  1:3411228/93‑1 (MQ=255)

                                                                                 gCGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAgg        <  2:5023666/93‑1 (MQ=255)

                                                                                  cGACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAggg       <  1:3693485/93‑1 (MQ=255)

                                                                                   gACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGa      <  1:2011037/93‑1 (MQ=255)

                                                                                   gACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGa      <  1:3540522/93‑1 (MQ=255)

                                                                                   gACATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATGGTCAGGGa      <  2:6123910/93‑1 (MQ=255)

                                                                                    aCATGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGAt     <  2:1747564/93‑1 (MQ=255)

                                                                                      aTGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAg   >  1:5701487/1‑93 (MQ=255)

                                                                                      aTGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAg   <  2:3438732/93‑1 (MQ=255)

                                                                                      aTGCCGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAg   <  2:155835/93‑1 (MQ=255)

                                                                                       tgccgcCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGt  <  2:1263973/93‑1 (MQ=255)

                                                                                       tgccgcCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGt  <  1:1442520/93‑1 (MQ=255)

GCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCTGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGT  >  NC_000913/1702636‑1702815

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`