BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,718,074	T→C	S59P (TCC→CCC)	slyB →	putative outer membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,718,074	0	T	C	100.0%	769.2 / NA	237	S59P (TCC→CCC)	slyB	putative outer membrane protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (106/131); total (106/131)

Only 100 of 240 total aligned reads displayed.

TATACCGCTTCTGAAGCGAAACAAGTACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATTCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCGGAACCGGGCGTTCTCTGGCTACT  >  NC_000913/1717984‑1718163

tataCCGCTTCTGAAGCGAAACAAGTACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATccc                                                                                         <  2:3770936/93‑1 (MQ=255)

 ataCCGCTTCTGAAGCGAAACAAGTACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCa                                                                                        <  2:3139073/93‑1 (MQ=255)

 ataCCGCTTCTGAAGCGAAACAAGTACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCa                                                                                        >  1:5864976/1‑93 (MQ=255)

  taCCGCTTCTGAAGCGAAACAAGTACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCaa                                                                                       >  1:19689/1‑93 (MQ=255)

   aCCGCTTCTGAAGCGAAACAAGTACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAAc                                                                                      <  2:1591809/93‑1 (MQ=255)

    ccGCTTCTGAAGCGAAACAAGTACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACg                                                                                     >  2:256310/1‑93 (MQ=255)

     cGCTTCTGAAGCGAAACAAGTACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGt                                                                                    <  2:4050485/93‑1 (MQ=255)

      gCTTCTGAAGCGAAACAAGTACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGtt                                                                                   >  2:539028/1‑93 (MQ=255)

      gCTTCTGAAGCGAAACAAGTACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGtt                                                                                   >  1:3028897/1‑93 (MQ=255)

       ctccTGAAGCGACACATGTACAGAATATCAGCTATGGCACCATCGTTACCGTACGTCCGCTACAGATTCAGGGCGGTGGTGATCCCAACGTTa                                                                                  <  2:1864842/90‑1 (MQ=255)

       cTTCTGAAGCGAAACAAGTACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTa                                                                                  <  1:5294289/93‑1 (MQ=255)

       cTTCTGAAGCGAAACAAGTACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTa                                                                                  >  1:5744227/1‑93 (MQ=255)

        ttCTGAAGCGAAACAAGTACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTAt                                                                                 >  1:4637021/1‑93 (MQ=255)

        ttCTGAAGCGAAACAAGTACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTAt                                                                                 <  2:2214185/93‑1 (MQ=255)

         tCTGAAGCGAAACAAGTACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATc                                                                                >  1:2942969/1‑93 (MQ=255)

            gAAGCGAAACAAGTACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGt                                                                             <  1:5977064/93‑1 (MQ=255)

              aGCGAAACAAGTACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGc                                                                           <  2:2351396/93‑1 (MQ=255)

              aGCGAAACAAGTACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGc                                                                           >  1:2677058/1‑93 (MQ=255)

               gCGAAACAAGTACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCa                                                                          >  1:6281480/1‑93 (MQ=255)

                 gAAACAAGTACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAAt                                                                        >  1:1840319/1‑93 (MQ=255)

                 gAAACAAGTACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAAt                                                                        >  1:1465382/1‑93 (MQ=255)

                   aaCAAGTACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTg                                                                      <  1:4676172/93‑1 (MQ=255)

                    aCAAGTACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTgg                                                                     <  2:719254/93‑1 (MQ=255)

                    aCAAGTACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTgg                                                                     >  1:3683552/1‑93 (MQ=255)

                     cAAGTACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGc                                                                    <  2:1076942/93‑1 (MQ=255)

                        gTACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGGGCAATTGGCggg                                                                 >  1:624332/1‑92 (MQ=255)

                         tACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTg                                                                >  1:912858/1‑93 (MQ=255)

                          aCAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGc                                                               <  1:4069883/93‑1 (MQ=255)

                           cAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCt                                                              <  2:4413724/93‑1 (MQ=255)

                             gAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGt                                                            <  1:550776/93‑1 (MQ=255)

                             gAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGt                                                            <  1:763151/93‑1 (MQ=255)

                             gAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGt                                                            >  1:602912/1‑93 (MQ=255)

                              aaTGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGtt                                                           >  2:2987760/1‑93 (MQ=255)

                                tGTCAGCTATGGCACTATCGTTAACGTACGTCGGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCt                                                         <  2:5716053/93‑1 (MQ=255)

                                tGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCt                                                         <  1:3461285/93‑1 (MQ=255)

                                 gTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCtt                                                        <  2:2461904/93‑1 (MQ=255)

                                  tCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGCGCTGTTCTtg                                                       >  2:684435/1‑93 (MQ=255)

                                   cAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTtgg                                                      <  2:2774496/93‑1 (MQ=255)

                                     gCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTtggtg                                                    >  1:1918716/1‑93 (MQ=255)

                                       tATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTggtggt                                                  <  1:2772874/93‑1 (MQ=255)

                                       tATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTggtggt                                                  >  1:441517/1‑93 (MQ=255)

                                        aTGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGtt                                                 <  2:2963818/93‑1 (MQ=255)

                                        aTGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGtt                                                 >  1:4342392/1‑93 (MQ=255)

                                         tGGTACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGttt                                                >  1:5302986/1‑93 (MQ=255)

                                         tGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGttt                                                <  2:2000598/93‑1 (MQ=255)

                                         tGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGttt                                                >  2:4725736/1‑93 (MQ=255)

                                          ggCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTc                                               <  1:1649322/93‑1 (MQ=255)

                                          ggCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATAGGCGGTGCTGTTCTTGGTGGTTTc                                               >  2:6180694/1‑93 (MQ=255)

                                           gCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTcc                                              <  2:5165545/93‑1 (MQ=255)

                                             aCCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTg                                            <  1:1266604/93‑1 (MQ=255)

                                              ccATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTgg                                           >  1:1072375/1‑93 (MQ=255)

                                              ccATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTgg                                           <  1:3705286/93‑1 (MQ=255)

                                              ccATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTgg                                           <  1:2269183/93‑1 (MQ=255)

                                                  cGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGaa                                       <  2:5078029/93‑1 (MQ=255)

                                                  cGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGaa                                       <  1:173128/93‑1 (MQ=255)

                                                  cGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGaa                                       <  2:6035923/93‑1 (MQ=255)

                                                   gTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAAt                                      >  1:464889/1‑93 (MQ=255)

                                                    ttAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATa                                     >  2:82719/1‑93 (MQ=255)

                                                    ttAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATa                                     >  1:1049935/1‑93 (MQ=255)

                                                     tAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATAc                                    >  2:4016107/1‑93 (MQ=255)

                                                      aaCGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACt                                   <  1:2380571/93‑1 (MQ=255)

                                                      aaCGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACt                                   <  2:5583656/93‑1 (MQ=255)

                                                      aaCGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACt                                   >  2:2289680/1‑93 (MQ=255)

                                                      aaCGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACt                                   <  2:1565787/93‑1 (MQ=255)

                                                      aaCGTACGTCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACt                                   >  1:6132858/1‑93 (MQ=255)

                                                        cgtacgtCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGt                                 <  2:1305310/93‑1 (MQ=255)

                                                           acgtCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTtgg                              >  2:2022285/1‑93 (MQ=255)

                                                            cgtCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTtggt                             <  1:5833462/93‑1 (MQ=255)

                                                            cgtCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTtggt                             <  1:211042/93‑1 (MQ=255)

                                                             gtCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTtggtg                            <  2:5863735/93‑1 (MQ=255)

                                                              tCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTtggtgg                           >  2:2785531/1‑93 (MQ=255)

                                                              tCCGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTtggtgg                           <  2:2852483/93‑1 (MQ=255)

                                                              gccGGTATAGATTCATGTCGGTGATGATCCCAACGTTATCGGTGCAATTGGCTGTGCTGTTCTTGGTGGTTTCCGTTGGAATACTGTtggtag                           <  2:3255885/92‑3 (MQ=255)

                                                               ccGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGc                          <  1:3897988/93‑1 (MQ=255)

                                                                cGGTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCg                         >  2:3498236/1‑93 (MQ=255)

                                                                 ggTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCgg                        <  1:3798390/93‑1 (MQ=255)

                                                                  gTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCGGa                       >  2:3800731/1‑93 (MQ=255)

                                                                  gTACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCGGa                       >  1:6149726/1‑93 (MQ=255)

                                                                   tgcAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCGGaa                      <  1:5116264/91‑1 (MQ=255)

                                                                   tACAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTTGCGGTTCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCGGaa                      <  1:483866/93‑1 (MQ=255)

                                                                    aCAGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCGGAAc                     <  2:3978419/93‑1 (MQ=255)

                                                                      aGATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTCTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCGGAACCg                   <  1:3379591/93‑1 (MQ=255)

                                                                       gATTCAGGGCGGTGATGATCCCAGCGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCGGAACCgg                  <  2:3538565/93‑1 (MQ=255)

                                                                       gATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCGGAACCgg                  <  1:86121/93‑1 (MQ=255)

                                                                       gATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCGGAACCgg                  >  2:843891/1‑93 (MQ=255)

                                                                       gATTCAGGGCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCGGAACCgg                  <  1:2765725/93‑1 (MQ=255)

                                                                           cAGGGCGGTGATGATCCCAACGTTATCGGTTCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCGGAACCGGGCGt              <  2:949150/93‑1 (MQ=255)

                                                                              ggCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCGGAACCGGGCGTtct           <  1:5481093/93‑1 (MQ=255)

                                                                               gCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCGGAACCGGGCGTtctc          <  1:99985/93‑1 (MQ=255)

                                                                               gCGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCGGAACCGGGCGTtctc          >  1:826921/1‑93 (MQ=255)

                                                                                cGGTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCGGAACCGGGCGTTctct         <  1:245342/93‑1 (MQ=255)

                                                                                 ggTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCGGAACCGGGCGTTCTCTg        <  2:5292933/93‑1 (MQ=255)

                                                                                 ggTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCGGAACCGGGCGTTCTCTg        <  2:1268156/93‑1 (MQ=255)

                                                                                  gTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCGGAACCGGGCGTTCTCTgg       <  1:3473536/93‑1 (MQ=255)

                                                                                  gTGATGATCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCGGAACCGGGCGTTCTCTgg       >  1:4929966/1‑93 (MQ=255)

                                                                                    gatgatCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCGGAACCGGGCGTTCTCTgggt     >  1:2092002/1‑91 (MQ=255)

                                                                                      tgatCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCGGAACCGGGCGTTCTCTGGCTAc   <  2:4318682/93‑1 (MQ=255)

                                                                                      tgatCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCGGAACCGGGCGTTCTCTGGCTAc   >  2:3563438/1‑93 (MQ=255)

                                                                                       gatCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCGGAACCGGGCGTTCTCTGGCTACt  <  1:5917228/93‑1 (MQ=255)

                                                                                       gatCCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCGGAACCGGGCGTTCTCTGGCTACt  >  1:1439167/1‑93 (MQ=255)

TATACCGCTTCTGAAGCGAAACAAGTACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATTCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCGGAACCGGGCGTTCTCTGGCTACT  >  NC_000913/1717984‑1718163

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`