BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,720,316	T→C	F58L (TTT→CTT)	b1645 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,720,316	0	T	C	100.0%	620.0 / NA	193	F58L (TTT→CTT)	b1645	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (96/97); total (96/97)

Only 100 of 199 total aligned reads displayed.

ACCATTGCCATGTGTCTGGCGCTGACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCTTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGCCATTGCGGCACTGCTTCTTGCCGGG  >  NC_000913/1720226‑1720405

aCCATTGCCATGTGTCTGGCGCTGACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCctt                                                                                         >  1:4458110/1‑93 (MQ=255)

 ccATTTCCATGTGTCTGGCGCTGACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTc                                                                                        <  2:1775009/93‑1 (MQ=255)

 ccATTGCCATGTGTCTGGCGCTGACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTc                                                                                        <  1:1839658/93‑1 (MQ=255)

  cATTGCCATGTGTCTGGCGCTGACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTcc                                                                                       >  1:4717054/1‑93 (MQ=255)

  cATTGCCATGTGTCTGGCGCTGACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTcc                                                                                       <  1:4844471/93‑1 (MQ=255)

    ttGCCATGTGTCTGGCGCTGACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCa                                                                                     >  2:2631073/1‑93 (MQ=255)

    ttGCCATGTGTCTGGCGCTGACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCa                                                                                     <  1:1952538/93‑1 (MQ=255)

     tGCCATGTGTCTGGCGCTGACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCAc                                                                                    <  1:1114656/93‑1 (MQ=255)

     tGCCATGTGTCTGGCGCTGACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCAc                                                                                    <  2:1730159/93‑1 (MQ=255)

     tGCCATGTGTCTGGCGCTGACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCAc                                                                                    <  2:5245668/93‑1 (MQ=255)

      gCCATGTGTCTGGCGCTGACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCAcc                                                                                   <  1:542893/93‑1 (MQ=255)

       ccATGTGTCTGGCGCTGACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCg                                                                                  >  2:3043776/1‑93 (MQ=255)

         aTGTGTCTGGCGCTGACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGtt                                                                                <  2:4280421/93‑1 (MQ=255)

         aTGTGTCTGGCGCTGACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGtt                                                                                >  2:5851526/1‑93 (MQ=255)

         aTGTGTCTGGCGCTGACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGtt                                                                                <  2:330458/93‑1 (MQ=255)

         aTGTGTCTGGCGCTGACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGtt                                                                                <  2:4850484/93‑1 (MQ=255)

            tgtCTGGCGCTGACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGc                                                                             <  2:1252938/93‑1 (MQ=255)

            tgtCTGGCGCTGACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGc                                                                             >  1:2528598/1‑93 (MQ=255)

            tgtCTGGCGCTGACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGc                                                                             >  2:4519569/1‑93 (MQ=255)

              tCTGGCGCTGACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCgg                                                                           >  1:1665552/1‑93 (MQ=255)

               cTGGCGCTGACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGCCCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGgt                                                                          <  1:3085695/93‑1 (MQ=255)

                   cgcTGACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTa                                                                      <  2:5295111/93‑1 (MQ=255)

                    gcTGACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTAt                                                                     >  1:2964081/1‑93 (MQ=255)

                     cTGACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATc                                                                    <  1:5411501/93‑1 (MQ=255)

                      tGACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCa                                                                   <  2:3525136/93‑1 (MQ=255)

                       gACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAg                                                                  >  2:3665591/1‑93 (MQ=255)

                         cGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCa                                                                >  2:2290009/1‑93 (MQ=255)

                         cGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCa                                                                >  2:3387841/1‑93 (MQ=255)

                          ggTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCaa                                                               >  1:480619/1‑93 (MQ=255)

                           gTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCaaa                                                              >  2:2557203/1‑93 (MQ=255)

                             tGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAg                                                            >  2:2200485/1‑93 (MQ=255)

                             tGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAg                                                            >  2:1934696/1‑93 (MQ=255)

                              gCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGc                                                           >  2:935720/1‑93 (MQ=255)

                               ccTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGcc                                                          >  2:5019480/1‑93 (MQ=255)

                               ccTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGcc                                                          <  1:2930466/93‑1 (MQ=255)

                               ccTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGcc                                                          >  2:4112378/1‑93 (MQ=255)

                                cTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCt                                                         <  2:3825261/93‑1 (MQ=255)

                                 tattatTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTc                                                        <  2:3127967/93‑1 (MQ=255)

                                  attattTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCg                                                       <  2:4450224/93‑1 (MQ=255)

                                  attattTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCg                                                       <  2:5368203/93‑1 (MQ=255)

                                  attattTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCg                                                       <  1:4114967/93‑1 (MQ=255)

                                  attattTAAATCTCGATGACCCCTCTTTGGCGATGCCCTCGGCTGAAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCg                                                       <  2:888578/93‑1 (MQ=255)

                                   ttattTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCgg                                                      >  1:2245817/1‑93 (MQ=255)

                                    tattTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGa                                                     <  1:3515589/93‑1 (MQ=255)

                                     attTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGAc                                                    <  2:6222342/93‑1 (MQ=255)

                                     attTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGAc                                                    <  1:1543075/93‑1 (MQ=255)

                                      tttAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACg                                                   >  1:5726206/1‑93 (MQ=255)

                                        tAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCa                                                 <  2:2355677/93‑1 (MQ=255)

                                        tAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCa                                                 <  2:3873585/93‑1 (MQ=255)

                                        tAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCa                                                 >  1:1340885/1‑93 (MQ=255)

                                         aaaTCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCAt                                                <  1:1367478/93‑1 (MQ=255)

                                          aaTCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATc                                               >  2:2443501/1‑93 (MQ=255)

                                          aaTCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATc                                               >  1:4304918/1‑93 (MQ=255)

                                          aaTCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATc                                               <  2:118515/93‑1 (MQ=255)

                                           aTCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCg                                              >  1:4328271/1‑93 (MQ=255)

                                            tCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGc                                             >  1:2575731/1‑93 (MQ=255)

                                            acTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAACCCTCGGACGCATCGc                                             <  2:6002496/92‑1 (MQ=255)

                                             cTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCt                                            <  1:4645926/93‑1 (MQ=255)

                                             cTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCt                                            <  1:2675538/93‑1 (MQ=255)

                                              tGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTg                                           <  1:2049336/93‑1 (MQ=255)

                                              tGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTg                                           <  2:658742/93‑1 (MQ=255)

                                                gATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGc                                         >  1:698584/1‑93 (MQ=255)

                                                 aTGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCa                                        <  1:5909876/93‑1 (MQ=255)

                                                  tGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAg                                       >  2:2110998/1‑93 (MQ=255)

                                                      cccTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTg                                   >  1:4921752/1‑93 (MQ=255)

                                                       ccTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGc                                  <  2:1445351/93‑1 (MQ=255)

                                                       ccTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGc                                  >  2:5381498/1‑93 (MQ=255)

                                                       ccTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGc                                  <  2:4355956/93‑1 (MQ=255)

                                                        cTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGGAGTTTGCt                                 >  1:360910/1‑93 (MQ=255)

                                                         tATTGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTc                                >  1:1024368/1‑93 (MQ=255)

                                                           ttGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCgg                              <  1:496407/93‑1 (MQ=255)

                                                            tGGGCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGa                             >  2:1330380/1‑93 (MQ=255)

                                                              ggCGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGc                           <  1:754983/93‑1 (MQ=255)

                                                                cGATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGCCa                         >  1:5111338/1‑93 (MQ=255)

                                                                 gATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGCCAt                        >  2:2690339/1‑93 (MQ=255)

                                                                 gATGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGCCAt                        >  1:5822229/1‑93 (MQ=255)

                                                                  aTGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGCCAtt                       <  1:2283907/93‑1 (MQ=255)

                                                                  aTGACCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGCCAtt                       <  1:5785377/93‑1 (MQ=255)

                                                                     aCCTCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTCTGCTCGGAGCCATTGCg                    >  1:5501249/1‑93 (MQ=255)

                                                                        tCGGCTGCCGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGCCATTGCGGCa                 >  2:6146152/1‑93 (MQ=255)

                                                                        tCGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGCCATTGTGGCa                 >  1:549205/1‑93 (MQ=255)

                                                                         cGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGCCATTGCGGCAc                >  1:270640/1‑93 (MQ=255)

                                                                         cGGCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGCCATTGCGGCAc                >  1:3779876/1‑93 (MQ=255)

                                                                          ggCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGCCATTGCGGCACt               <  2:2381636/93‑1 (MQ=255)

                                                                           gCTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGCCATTGCGGCACTg              >  2:5089376/1‑93 (MQ=255)

                                                                            cTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGCCATTGCGGCACTGc             >  1:467548/1‑93 (MQ=255)

                                                                            cTGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGCCATTGCGGCACTGc             <  1:4176058/93‑1 (MQ=255)

                                                                             tGCAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGCCATTGCGGCACTGct            >  2:4723081/1‑93 (MQ=255)

                                                                               cAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGCCATTGCGGCACTGcttc          <  1:1692144/93‑1 (MQ=255)

                                                                               cAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGCCATTGCGGCACTGcttc          <  2:786923/93‑1 (MQ=255)

                                                                               cAGTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGCCATTGCGGCACTGcttc          >  1:483161/1‑93 (MQ=255)

                                                                                cgTGGTTAGCGTTCCCACCGTTGGCGGTGTAATCAGCAAAAGCCTCGGACGCAGCGCTGGCAGTTTGCTCGGAGCCATTGCGGCACTGcttct         <  2:2051974/92‑1 (MQ=255)

                                                                                 gTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGCCATTGCGGCACTGcttctt        >  1:2510280/1‑93 (MQ=255)

                                                                                 gTGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGCCATTGCGGCACTGcttctt        >  1:5348635/1‑93 (MQ=255)

                                                                                  tGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGCCATTGCGGCACTGCTTCTTg       <  1:2866517/93‑1 (MQ=255)

                                                                                  tGGTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGCCATTGCGGCACTGCTTCTTg       <  2:1589809/93‑1 (MQ=255)

                                                                                   ggTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGCCATTGCGGCACTGCTTCTTGc      <  1:3187631/93‑1 (MQ=255)

                                                                                    gTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGCCATTGCGGCACTGCTTCTTGcc     <  1:2388168/93‑1 (MQ=255)

                                                                                    gTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGCCATTGCGGCACTGCTTCTTGcc     <  1:3311257/93‑1 (MQ=255)

                                                                                    gTTAGCCTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGCCATTGCGGCACTGCTTCTTGcc     >  1:4692285/1‑93 (MQ=255)

ACCATTGCCATGTGTCTGGCGCTGACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCTTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGCCATTGCGGCACTGCTTCTTGCCGGG  >  NC_000913/1720226‑1720405

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`