BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,822,045	G→A	L169L (CTG→CTA)	b1741 →	putative excinuclease subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,822,045	0	G	A	100.0%	879.5 / NA	239	L169L (CTG→CTA)	b1741	putative excinuclease subunit
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (129/110); total (129/110)

Only 100 of 245 total aligned reads displayed.

CCCCAACCTGTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTGCTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGCATGCTGCGGTAAAGAGAGCCA  >  NC_000913/1821955‑1822134

ccccAACCTGTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCctact                                                                                         <  1:3729387/93‑1 (MQ=255)

 cccAACCTGTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCctactg                                                                                        >  2:3181475/1‑93 (MQ=255)

 cccAACCTGTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCctactg                                                                                        <  1:441526/93‑1 (MQ=255)

 cccAACCTGTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCctactg                                                                                        <  1:6102750/93‑1 (MQ=255)

 cccAACCTGTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCctactg                                                                                        <  1:1812904/93‑1 (MQ=255)

  ccAACCTGTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTgg                                                                                       >  1:5446491/1‑93 (MQ=255)

  ccAACCTGTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTgg                                                                                       <  1:6263181/93‑1 (MQ=255)

   cAACCTGTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTggg                                                                                      >  2:3113364/1‑93 (MQ=255)

   cAACCTGTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTggg                                                                                      >  2:3382653/1‑93 (MQ=255)

    aaCCTGTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGa                                                                                     >  2:2608951/1‑93 (MQ=255)

    aaCCTGTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGa                                                                                     <  1:1432426/93‑1 (MQ=255)

    aaCCTGTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGa                                                                                     >  1:4636819/1‑93 (MQ=255)

      ccTGTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACt                                                                                   <  1:2900017/93‑1 (MQ=255)

       cTGTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTg                                                                                  >  1:1048854/1‑93 (MQ=255)

       cTGTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTg                                                                                  >  1:2660284/1‑93 (MQ=255)

        tGTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTgg                                                                                 >  1:3975749/1‑93 (MQ=255)

        tGTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTgg                                                                                 <  2:4505419/93‑1 (MQ=255)

         gTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGa                                                                                >  2:3598726/1‑93 (MQ=255)

         gTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGa                                                                                >  1:5679782/1‑93 (MQ=255)

         gTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGa                                                                                >  2:6065469/1‑93 (MQ=255)

          tttGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGaa                                                                               >  2:4342054/1‑93 (MQ=255)

          tttGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGaa                                                                               <  1:5000944/93‑1 (MQ=255)

           ttGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAAc                                                                              <  1:5110292/93‑1 (MQ=255)

            tGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAAcc                                                                             >  2:141468/1‑93 (MQ=255)

             ggCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCg                                                                            >  2:5890270/1‑93 (MQ=255)

              gCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGt                                                                           >  1:3863182/1‑93 (MQ=255)

                cTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACTATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGGACCGTTa                                                                         >  1:4025538/1‑93 (MQ=255)

                 tGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTaa                                                                        <  2:905839/93‑1 (MQ=255)

                 tGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTaa                                                                        <  1:2087150/93‑1 (MQ=255)

                   tttGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGt                                                                      <  1:1835359/93‑1 (MQ=255)

                    ttGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTc                                                                     >  1:165618/1‑93 (MQ=255)

                    ttGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTc                                                                     <  2:5681582/93‑1 (MQ=255)

                       ccAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTcgcg                                                                  >  2:2238680/1‑93 (MQ=255)

                        cAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCgg                                                                 >  2:6112943/1‑93 (MQ=255)

                         aaTAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGt                                                                <  1:4107827/93‑1 (MQ=255)

                         aaTAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGt                                                                <  1:2096692/93‑1 (MQ=255)

                             ggCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTg                                                            >  2:403676/1‑93 (MQ=255)

                             ggCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTg                                                            <  2:734223/93‑1 (MQ=255)

                              gcgcgcAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGc                                                           <  2:4916554/93‑1 (MQ=255)

                                   cAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGtt                                                      >  2:557622/1‑93 (MQ=255)

                                   cAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGtt                                                      >  2:1356089/1‑93 (MQ=255)

                                   cAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGtt                                                      >  2:5319439/1‑93 (MQ=255)

                                    aGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGttt                                                     <  1:2952261/93‑1 (MQ=255)

                                     gCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGtttt                                                    <  2:4784487/93‑1 (MQ=255)

                                     gCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGtttt                                                    <  1:3429931/93‑1 (MQ=255)

                                     gCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGtttt                                                    >  1:2216025/1‑93 (MQ=255)

                                     gCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGtttt                                                    <  1:4227154/93‑1 (MQ=255)

                                      cTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTc                                                   <  1:3741492/93‑1 (MQ=255)

                                       tttGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCg                                                  <  1:1725257/93‑1 (MQ=255)

                                       tttGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCg                                                  >  1:65841/1‑93 (MQ=255)

                                         tGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGtt                                                >  2:1922522/1‑93 (MQ=255)

                                             aGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAgc                                            <  2:2775198/93‑1 (MQ=255)

                                              gCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAgcg                                           >  2:5036527/1‑93 (MQ=255)

                                                aTTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCt                                         >  2:1050351/1‑93 (MQ=255)

                                                   gCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTaaa                                      <  2:3709736/93‑1 (MQ=255)

                                                   gCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTaaa                                      <  2:3005724/93‑1 (MQ=255)

                                                    cAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTaaaa                                     <  2:4797453/93‑1 (MQ=255)

                                                    cAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTaaaa                                     >  2:1967670/1‑93 (MQ=255)

                                                      gACCATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACg                                   >  2:4096579/1‑93 (MQ=255)

                                                        ccATCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGtt                                 <  1:189023/93‑1 (MQ=255)

                                                          aTCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTgc                               <  2:4444151/93‑1 (MQ=255)

                                                           tCGCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTgcg                              >  1:1247783/1‑93 (MQ=255)

                                                             gCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGcc                            <  2:540714/93‑1 (MQ=255)

                                                             gCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGcc                            >  1:5722209/1‑93 (MQ=255)

                                                             gCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGcc                            >  1:5258946/1‑93 (MQ=255)

                                                             gCTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGcc                            >  2:4243230/1‑93 (MQ=255)

                                                              cTGATGAACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCg                           >  1:4793973/1‑93 (MQ=255)

                                                               tgatgaACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCgg                          <  1:4278175/93‑1 (MQ=255)

                                                               tgatgaACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCgg                          >  1:5051129/1‑93 (MQ=255)

                                                                gatgaACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGa                         <  2:1582576/93‑1 (MQ=255)

                                                                gatgaACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGa                         >  1:1377464/1‑93 (MQ=255)

                                                                 atgaACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAg                        >  1:4056592/1‑93 (MQ=255)

                                                                 atgaACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAg                        <  2:2357703/93‑1 (MQ=255)

                                                                  tgaACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGc                       <  1:593043/93‑1 (MQ=255)

                                                                  tgaACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGc                       >  1:5389470/1‑93 (MQ=255)

                                                                   gaACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGCa                      <  1:2551059/93‑1 (MQ=255)

                                                                   gaACAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGCa                      <  1:3505125/93‑1 (MQ=255)

                                                                     aCAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGCAtg                    <  2:3330460/93‑1 (MQ=255)

                                                                     aCAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGCAtg                    >  1:3974278/1‑93 (MQ=255)

                                                                      cAAAAACTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGCAtgc                   <  1:48888/93‑1 (MQ=255)

                                                                       aaaaaCTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGCAtgct                  >  1:5601573/1‑93 (MQ=255)

                                                                        aaaaCTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGCAtgctg                 <  2:2493272/93‑1 (MQ=255)

                                                                         aagcTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGCAtgctgc                <  2:2165823/90‑1 (MQ=255)

                                                                         aaaCTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGCAtgctgc                <  1:120622/93‑1 (MQ=255)

                                                                         aaaCTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGCAtgctgc                >  2:3528012/1‑93 (MQ=255)

                                                                         aaaCTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGCAtgctgc                <  2:2642242/93‑1 (MQ=255)

                                                                          aaCTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGCATGCTGCg               >  1:2204498/1‑93 (MQ=255)

                                                                          aaCTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGCATGCTGCg               >  1:2675349/1‑93 (MQ=255)

                                                                            cTTTGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGCATGCTGCGGt             >  1:3397878/1‑93 (MQ=255)

                                                                             tttGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTACAACGTTGCGCCGGAGCATGCTGCGGTa            >  1:505437/1‑93 (MQ=255)

                                                                             tttGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGCATGCTGCGGTa            >  2:1346787/1‑93 (MQ=255)

                                                                             tttGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGCATGCTGCGGTa            <  1:2596269/93‑1 (MQ=255)

                                                                             tttGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGCATGCTGCGGTa            <  2:1809254/93‑1 (MQ=255)

                                                                               tGTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGCATGCTGCGGTaaa          <  2:2911551/93‑1 (MQ=255)

                                                                                gTTATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGCATGCTGCGGTAAag         <  1:3891671/93‑1 (MQ=255)

                                                                                  tATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGCATGCTGCGGTAAagag       >  2:297203/1‑93 (MQ=255)

                                                                                  tATGGCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGCATGCTGCGGTAAagag       >  2:2763533/1‑93 (MQ=255)

                                                                                      gCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGCATGCTGCGGTAAAGAGAGcc   <  1:3640905/93‑1 (MQ=255)

                                                                                      gCCTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGCATGCTGCGGTAAAGAGAGcc   <  1:3065975/93‑1 (MQ=255)

                                                                                       ccTACTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGCATGCTGCGGTAAAGAGAGCCa  <  1:936015/93‑1 (MQ=255)

CCCCAACCTGTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTGCTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGCATGCTGCGGTAAAGAGAGCCA  >  NC_000913/1821955‑1822134

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`