BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,892,514	T→C	intergenic (+58/+62)	b1810 → / ← b1811	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,892,514	0	T	C	100.0%	697.6 / NA	216	intergenic (+58/+62)	b1810/b1811	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (121/95); total (121/95)

Only 100 of 220 total aligned reads displayed.

TATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGTCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCC  >  NC_000913/1892424‑1892603

tatatGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGccc                                                                                         <  1:918113/93‑1 (MQ=255)

 atatGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCt                                                                                        <  1:5219082/93‑1 (MQ=255)

 atatGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCt                                                                                        <  2:3786245/93‑1 (MQ=255)

  tatGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCtt                                                                                       >  1:4615624/1‑93 (MQ=255)

   atGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCttt                                                                                      <  1:1313197/93‑1 (MQ=255)

   atGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCttt                                                                                      <  1:4333067/93‑1 (MQ=255)

   atGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCttt                                                                                      <  2:612335/93‑1 (MQ=255)

   atGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCttt                                                                                      <  2:4486741/93‑1 (MQ=255)

      cAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTtc                                                                                   >  2:2936511/1‑93 (MQ=255)

        ggAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTtctc                                                                                 >  2:3984730/1‑93 (MQ=255)

        ggAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTtctc                                                                                 >  2:6276691/1‑93 (MQ=255)

        ggAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTtctc                                                                                 >  2:1655191/1‑93 (MQ=255)

        ggAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTtctc                                                                                 >  2:1984830/1‑93 (MQ=255)

             aaCTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAAt                                                                            <  2:5137378/93‑1 (MQ=255)

              aCTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATc                                                                           <  1:2808435/93‑1 (MQ=255)

                  aaaGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAAt                                                                       <  2:3614333/93‑1 (MQ=255)

                  aaaGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAAt                                                                       <  1:3527791/93‑1 (MQ=255)

                   aaGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATg                                                                      >  1:1171003/1‑93 (MQ=255)

                   aaGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATg                                                                      <  1:6229663/93‑1 (MQ=255)

                   aaGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATg                                                                      <  2:1001095/93‑1 (MQ=255)

                    aGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGa                                                                     <  1:5368588/93‑1 (MQ=255)

                     gCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGat                                                                    >  1:2615781/1‑93 (MQ=255)

                     gCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGat                                                                    <  1:4131554/93‑1 (MQ=255)

                      cACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGatc                                                                   <  1:1981418/93‑1 (MQ=255)

                        cTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGatcat                                                                 <  1:788135/93‑1 (MQ=255)

                        cTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGatcat                                                                 <  2:17822/93‑1 (MQ=255)

                         tGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGatcatc                                                                <  1:4065124/93‑1 (MQ=255)

                         tGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGatcatc                                                                >  2:666764/1‑93 (MQ=255)

                           gTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCgg                                                              >  2:5290269/1‑93 (MQ=255)

                           gTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCgg                                                              <  1:1288297/93‑1 (MQ=255)

                           gTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCgg                                                              >  1:4020933/1‑93 (MQ=255)

                            tCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCggt                                                             >  2:3055039/1‑92 (MQ=255)

                            tCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGc                                                             >  1:3217922/1‑93 (MQ=255)

                            tCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGc                                                             >  2:5568745/1‑93 (MQ=255)

                             cTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCt                                                            >  2:266320/1‑93 (MQ=255)

                              tGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCtt                                                           >  1:5777062/1‑93 (MQ=255)

                               gAGTTAAATTTATATCAGCATAACTGGGTCAGGACGCTTTTAATTACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATTGGCTTc                                                          >  2:919950/1‑93 (MQ=255)

                               gAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTc                                                          <  2:3224647/93‑1 (MQ=255)

                                aGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCt                                                         >  1:955225/1‑93 (MQ=255)

                                 gTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCta                                                        <  2:5881911/93‑1 (MQ=255)

                                     aaTTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAAc                                                    >  2:4169607/1‑93 (MQ=255)

                                     aaTTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAAc                                                    <  2:4446388/93‑1 (MQ=255)

                                       tttATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGa                                                  <  2:5026835/93‑1 (MQ=255)

                                       tttATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGa                                                  >  2:897224/1‑93 (MQ=255)

                                        ttATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGaa                                                 >  1:4402610/1‑93 (MQ=255)

                                         tataTCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGaaa                                                <  2:2447695/93‑1 (MQ=255)

                                          atatCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAAt                                               >  1:1362499/1‑93 (MQ=255)

                                           tatCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATc                                              <  2:2038072/93‑1 (MQ=255)

                                            atCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCg                                             >  2:134005/1‑93 (MQ=255)

                                             tCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGa                                            >  2:4129644/1‑93 (MQ=255)

                                             tCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGa                                            <  2:5017091/93‑1 (MQ=255)

                                               aGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATa                                          <  1:220230/93‑1 (MQ=255)

                                                gCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATAc                                         <  2:3487841/93‑1 (MQ=255)

                                                gCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATAGATAc                                         >  1:2854395/1‑93 (MQ=255)

                                                 cATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACg                                        >  1:4660228/1‑93 (MQ=255)

                                                 cATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACg                                        <  1:4841980/93‑1 (MQ=255)

                                                   tAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGa                                      <  2:3572622/93‑1 (MQ=255)

                                                    aaaTGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGAt                                     <  1:1547045/93‑1 (MQ=255)

                                                     aaTGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGAtt                                    >  2:78294/1‑93 (MQ=255)

                                                     aaTGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGAtt                                    >  2:488316/1‑93 (MQ=255)

                                                       tGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAg                                  >  2:2534003/1‑93 (MQ=255)

                                                       tGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAg                                  >  2:6021470/1‑93 (MQ=255)

                                                       tGGGTCAGGACGATTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAg                                  >  1:4975415/1‑93 (MQ=255)

                                                         ggTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAgtg                                <  2:2837850/93‑1 (MQ=255)

                                                          gTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAgtgt                               >  1:3435092/1‑93 (MQ=255)

                                                          gTCAGAACGCTTTTAATCACATATAACAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAgtgt                               <  1:671547/93‑1 (MQ=255)

                                                           tCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAgtgtg                              <  2:4808689/93‑1 (MQ=255)

                                                            cAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAgtgtgt                             <  1:4531840/93‑1 (MQ=255)

                                                            cAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAgtgtgt                             >  1:4364169/1‑93 (MQ=255)

                                                              ggACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTa                           >  1:4769092/1‑93 (MQ=255)

                                                              ggACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTa                           <  1:3264475/93‑1 (MQ=255)

                                                              ggACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTa                           >  2:3171394/1‑93 (MQ=255)

                                                              ggACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATAGATACGGATTAGTGTGTTa                           >  2:4600689/1‑93 (MQ=255)

                                                              ggACGATTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTa                           >  2:5532774/1‑93 (MQ=255)

                                                               gACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTAc                          >  1:395000/1‑93 (MQ=255)

                                                                 cGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTc                        <  2:5777062/93‑1 (MQ=255)

                                                                 cGCTTTTAATCACATAAGAACAGCGCCCTTTTTCACCCACTCTAATGAACATCGGATTCAATAACAAAATCGATACGGATTAGTGTGTTACTc                        <  1:6307740/93‑1 (MQ=255)

                                                                  gCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCg                       <  2:4110080/93‑1 (MQ=255)

                                                                  gCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCg                       <  1:2696906/93‑1 (MQ=255)

                                                                  gCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCg                       >  2:4279222/1‑93 (MQ=255)

                                                                   cTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGt                      <  2:367242/93‑1 (MQ=255)

                                                                    ttttAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGtt                     >  1:2024989/1‑92 (MQ=255)

                                                                    ttttAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTc                     >  1:5672875/1‑93 (MQ=255)

                                                                      ttAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCtt                   >  1:839120/1‑93 (MQ=255)

                                                                       tAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTc                  <  1:367845/93‑1 (MQ=255)

                                                                        aaTCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCa                 <  2:1989413/93‑1 (MQ=255)

                                                                         aTCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCAt                >  1:5967370/1‑93 (MQ=255)

                                                                         aTCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCAt                >  2:5325042/1‑93 (MQ=255)

                                                                          tCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATc               >  2:4209703/1‑93 (MQ=255)

                                                                          tCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATc               >  2:75462/1‑93 (MQ=255)

                                                                          tCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATc               >  2:26030/1‑93 (MQ=255)

                                                                           cacaTATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATcc              <  2:4919666/93‑1 (MQ=255)

                                                                            acaTATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCt             >  2:3858107/1‑93 (MQ=255)

                                                                              atatAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCa           >  1:4464309/1‑93 (MQ=255)

                                                                              atatAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCa           >  1:2272808/1‑93 (MQ=255)

                                                                              atatAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCa           >  1:2409403/1‑93 (MQ=255)

                                                                               tataAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCaa          >  2:4158721/1‑93 (MQ=255)

                                                                               tataAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCaa          <  1:4247537/93‑1 (MQ=255)

                                                                                  aaaaaGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAAc       <  2:1210590/93‑1 (MQ=255)

                                                                                     aaGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAAcgcg    >  1:173183/1‑93 (MQ=255)

TATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGTCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCC  >  NC_000913/1892424‑1892603

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`