BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,972,288	G→A	T354M (ACG→ATG)	cheA ←	CheA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,972,288	0	G	A	100.0%	775.1 / NA	209	T354M (ACG→ATG)	cheA	CheA
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (108/101); total (108/101)

Only 100 of 218 total aligned reads displayed.

TGATCGAGGCTATTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCGA  >  NC_000913/1972198‑1972377

tGATCGAGGCTATTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATc                                                                                         <  1:1277805/93‑1 (MQ=255)

tGATCGAGGCTATTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATc                                                                                         <  1:5395717/93‑1 (MQ=255)

  aTCGAGGCTATTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAg                                                                                       >  1:2454854/1‑93 (MQ=255)

      aGGCTATTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCt                                                                                   >  1:5661294/1‑93 (MQ=255)

      aGGCTATTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCt                                                                                   <  1:1593472/93‑1 (MQ=255)

       ggCTATTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTa                                                                                  >  1:3842369/1‑93 (MQ=255)

        gCTATTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTAc                                                                                 >  2:1365317/1‑93 (MQ=255)

           aTTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTg                                                                              >  1:4336359/1‑93 (MQ=255)

           aTTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTg                                                                              >  1:1577612/1‑93 (MQ=255)

           aTTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTg                                                                              >  2:4002845/1‑93 (MQ=255)

            ttGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGc                                                                             >  2:5622765/1‑93 (MQ=255)

            ttGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGc                                                                             <  1:461974/93‑1 (MQ=255)

             tGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCt                                                                            <  1:6253007/93‑1 (MQ=255)

                gTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGc                                                                         <  2:5365282/93‑1 (MQ=255)

                   ccAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGa                                                                      <  1:4448389/93‑1 (MQ=255)

                   ccAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGa                                                                      >  1:4167528/1‑93 (MQ=255)

                   ccAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGa                                                                      <  2:6175548/93‑1 (MQ=255)

                    cAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAg                                                                     >  2:5971077/1‑93 (MQ=255)

                    cAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAg                                                                     <  1:6153794/93‑1 (MQ=255)

                     aGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGGGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGt                                                                    <  1:5521060/93‑1 (MQ=255)

                     aGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGt                                                                    >  1:188090/1‑93 (MQ=255)

                     aGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGt                                                                    >  1:316769/1‑93 (MQ=255)

                      ggTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCGGTTCTACCTGCTTGCCgtggt                                                                   >  2:6814/1‑89 (MQ=255)

                      ggTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGtt                                                                   >  1:4048090/1‑93 (MQ=255)

                      ggTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGtt                                                                   >  2:769415/1‑93 (MQ=255)

                      ggTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGtt                                                                   >  2:3281207/1‑93 (MQ=255)

                        tGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGtttt                                                                 >  2:6030179/1‑93 (MQ=255)

                          ggTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTcc                                                               >  1:1550712/1‑93 (MQ=255)

                           gTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTccc                                                              <  2:2266080/93‑1 (MQ=255)

                              ggCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGcc                                                           <  1:5428265/92‑1 (MQ=255)

                              aGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGcc                                                           >  2:3445213/1‑93 (MQ=255)

                              aGCGGGTCGATAATGCGTTCTATCAGACTTTTGTAGAGTTCAGTAAAACTGCCCACCAGGATCAGTTCTACATCCTTACCGAGTTTTCCCTcc                                                           >  2:4647112/1‑93 (MQ=255)

                               gCGGGTCGATAATGCGTTCTATCAGGCTGTTGGCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGGTTTCCCGCCa                                                          >  2:3137284/1‑93 (MQ=255)

                                 gggTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGa                                                        >  2:4046303/1‑93 (MQ=255)

                                   gTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATc                                                      >  1:5278850/1‑93 (MQ=255)

                                    tCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCa                                                     <  1:5703285/93‑1 (MQ=255)

                                    tCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCa                                                     >  1:2161716/1‑93 (MQ=255)

                                       aTAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGc                                                  <  1:251174/93‑1 (MQ=255)

                                       aTAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGc                                                  >  1:5377548/1‑93 (MQ=255)

                                        tAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCa                                                 >  2:5051720/1‑93 (MQ=255)

                                        tAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCa                                                 >  1:5610351/1‑93 (MQ=255)

                                        tAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCa                                                 >  1:4183949/1‑93 (MQ=255)

                                         aaTGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCAc                                                >  1:2046915/1‑93 (MQ=255)

                                            gCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAg                                             <  1:6113449/93‑1 (MQ=255)

                                            gCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAg                                             <  1:2253258/93‑1 (MQ=255)

                                             cGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTCCCTGCTTGCCGAGTTTTCCCGCCAGATCACGCGCCAGc                                            <  2:4386152/93‑1 (MQ=255)

                                             cGTTCTATCAGCCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGc                                            <  2:1217645/93‑1 (MQ=255)

                                              gTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGcc                                           >  1:3523251/1‑93 (MQ=255)

                                               ttCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCg                                          >  1:4763123/1‑93 (MQ=255)

                                                tCTATCAGGCTTTTGTCGAGTTCAGTAGACCTGCCCTCCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCgg                                         <  1:73927/93‑1 (MQ=255)

                                                 cTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCggg                                        >  2:5214281/1‑93 (MQ=255)

                                                 cTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCggg                                        <  1:1161570/93‑1 (MQ=255)

                                                  tATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCgggg                                       >  2:6083278/1‑93 (MQ=255)

                                                   aTCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGa                                      <  2:438100/93‑1 (MQ=255)

                                                    tCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGATTTCCCGCCAGATCACGCAACAGACGGGGag                                     >  1:1237044/1‑92 (MQ=255)

                                                     taGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATa                                    <  1:3368367/92‑1 (MQ=255)

                                                     cAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATa                                    <  1:4949650/93‑1 (MQ=255)

                                                     cAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATa                                    <  2:161029/93‑1 (MQ=255)

                                                      aGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAg                                   <  1:1360051/93‑1 (MQ=255)

                                                      aGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAg                                   >  1:2413883/1‑93 (MQ=255)

                                                       ggCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGc                                  >  1:277075/1‑93 (MQ=255)

                                                         cTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGa                                <  1:2723914/93‑1 (MQ=255)

                                                         cTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGa                                >  1:2542894/1‑93 (MQ=255)

                                                         cTTTTGTCGAGTTCAGTAGAACTCCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGa                                <  2:1492534/93‑1 (MQ=255)

                                                            ttGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTa                             >  1:179707/1‑93 (MQ=255)

                                                             tGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTaa                            <  2:4555141/93‑1 (MQ=255)

                                                             tGTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTaa                            >  1:2195322/1‑93 (MQ=255)

                                                              gTCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTaaa                           >  1:3309047/1‑93 (MQ=255)

                                                               tCGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTaaaa                          >  1:2062378/1‑93 (MQ=255)

                                                                cGAGTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTaaaaa                         >  2:1836211/1‑93 (MQ=255)

                                                                   gTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACat                      <  2:2297576/93‑1 (MQ=255)

                                                                   gTTCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACat                      <  2:2569686/93‑1 (MQ=255)

                                                                     tCAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACatat                    >  1:5192449/1‑93 (MQ=255)

                                                                      cAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATAtt                   <  2:3804006/93‑1 (MQ=255)

                                                                      cAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATAtt                   <  2:3706668/93‑1 (MQ=255)

                                                                      cAGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATAtt                   >  1:1978464/1‑93 (MQ=255)

                                                                       aGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTc                  <  1:5851741/93‑1 (MQ=255)

                                                                       aGTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTc                  >  1:4590046/1‑93 (MQ=255)

                                                                        gTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTcc                 <  2:298251/93‑1 (MQ=255)

                                                                        gTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTcc                 >  2:4819045/1‑93 (MQ=255)

                                                                        gTAGAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTcc                 >  1:5283013/1‑93 (MQ=255)

                                                                           gAACTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATc              <  1:5029782/93‑1 (MQ=255)

                                                                            aaCTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCg             <  2:271196/93‑1 (MQ=255)

                                                                            aaCTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCg             <  2:2195350/93‑1 (MQ=255)

                                                                            aaCTGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCg             <  2:1899483/93‑1 (MQ=255)

                                                                               tGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGca          >  1:1123431/1‑93 (MQ=255)

                                                                               tGCCCACCAGCATCAGTTCTACCTGCTTGCCGAGCTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGca          >  2:331934/1‑93 (MQ=255)

                                                                                gCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGcat         >  2:4519083/1‑93 (MQ=255)

                                                                                gCCCACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGcat         >  2:319443/1‑93 (MQ=255)

                                                                                 cccACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGcatc        >  2:4965602/1‑93 (MQ=255)

                                                                                 cccACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGcatc        >  2:5678641/1‑93 (MQ=255)

                                                                                 cccACCAGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGcatc        <  2:5750133/93‑1 (MQ=255)

                                                                                   caccaGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGcatcat      >  1:391424/1‑93 (MQ=255)

                                                                                    accaGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATg     >  1:5940101/1‑93 (MQ=255)

                                                                                    accaGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATg     >  1:591486/1‑93 (MQ=255)

                                                                                     ccaGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGc    >  2:4867191/1‑93 (MQ=255)

                                                                                     ccaGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGc    >  1:2352972/1‑93 (MQ=255)

                                                                                     ccaGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGc    >  2:3575610/1‑93 (MQ=255)

                                                                                      caGCATCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCg   <  1:875435/93‑1 (MQ=255)

                                                                                      caGCATCAGTTCTACCTGCTTCCCGAATTTACCCGCCAGAGCACGCTCCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCg   <  1:1065885/93‑1 (MQ=255)

TGATCGAGGCTATTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCGA  >  NC_000913/1972198‑1972377

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`