BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,972,685	T→C	T222A (ACC→GCC)	cheA ←	CheA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,972,685	0	T	C	100.0%	696.4 / NA	214	T222A (ACC→GCC)	cheA	CheA
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (99/115); total (99/115)

Only 100 of 215 total aligned reads displayed.

CTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATCCG  >  NC_000913/1972596‑1972774

 tCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATc                                                                                       <  1:2092620/93‑1 (MQ=255)

 tCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATc                                                                                       <  1:6022278/93‑1 (MQ=255)

  ccACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCt                                                                                      <  1:1805336/93‑1 (MQ=255)

  ccACGCGCCCGGTCGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCt                                                                                      <  1:416748/93‑1 (MQ=255)

    aCGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGa                                                                                    <  2:6215383/93‑1 (MQ=255)

     cgcgGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGAt                                                                                   <  1:1615990/93‑1 (MQ=255)

     cgcgGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGAt                                                                                   <  2:2774627/93‑1 (MQ=255)

     cgcgGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGAt                                                                                   <  2:2514549/93‑1 (MQ=255)

      gcgGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATc                                                                                  >  1:2196024/1‑93 (MQ=255)

      gcgGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATc                                                                                  <  2:3702351/93‑1 (MQ=255)

       cgGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCg                                                                                 <  1:4016222/93‑1 (MQ=255)

         gCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGc                                                                               >  1:3444307/1‑93 (MQ=255)

          ccGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCt                                                                              >  2:3215471/1‑93 (MQ=255)

          ccGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCt                                                                              <  1:1428428/93‑1 (MQ=255)

           cGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCtt                                                                             <  1:3263268/93‑1 (MQ=255)

                ggCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATc                                                                        <  2:505110/93‑1 (MQ=255)

                ggCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATc                                                                        <  2:1505343/93‑1 (MQ=255)

                   gcTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATcaca                                                                     <  1:825479/93‑1 (MQ=255)

                   gcTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATcaca                                                                     <  1:3948121/93‑1 (MQ=255)

                    cTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACaa                                                                    <  2:2319748/93‑1 (MQ=255)

                    cTTGTACGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACaa                                                                    <  1:5473574/93‑1 (MQ=255)

                      tGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACaaaa                                                                  >  1:1923787/1‑93 (MQ=255)

                       gTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAAc                                                                 >  2:1970924/1‑93 (MQ=255)

                       gTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAAc                                                                 >  2:1615096/1‑93 (MQ=255)

                       gTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAAc                                                                 >  1:125230/1‑93 (MQ=255)

                        ttCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACa                                                                <  1:6198721/93‑1 (MQ=255)

                        ttCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACa                                                                >  2:1023452/1‑93 (MQ=255)

                         tCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACag                                                               >  1:2473539/1‑93 (MQ=255)

                         tCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACag                                                               <  2:2828861/93‑1 (MQ=255)

                         tCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACag                                                               <  2:1125603/93‑1 (MQ=255)

                          cGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACaga                                                              <  2:775539/93‑1 (MQ=255)

                          cGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACaga                                                              <  2:1185549/93‑1 (MQ=255)

                          cGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACaga                                                              >  1:3113338/1‑93 (MQ=255)

                           ggCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACagag                                                             <  1:3535290/93‑1 (MQ=255)

                            gCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGt                                                            <  1:4319410/93‑1 (MQ=255)

                             cTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTa                                                           >  1:1634568/1‑93 (MQ=255)

                             cTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTa                                                           >  2:5665516/1‑93 (MQ=255)

                              tGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTAc                                                          >  1:3904565/1‑93 (MQ=255)

                              tGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTAc                                                          >  1:170117/1‑93 (MQ=255)

                               gCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTAcc                                                         <  1:3017649/93‑1 (MQ=255)

                                 cAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGc                                                       <  1:2291922/93‑1 (MQ=255)

                                  aGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCt                                                      <  2:2032808/93‑1 (MQ=255)

                                   gTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCtg                                                     >  1:4046348/1‑93 (MQ=255)

                                   gTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCtg                                                     >  2:1847344/1‑93 (MQ=255)

                                   gTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAAAAAACCGCtg                                                     >  2:4265736/1‑93 (MQ=255)

                                      tAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGa                                                  >  2:4168787/1‑93 (MQ=255)

                                      tAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGa                                                  <  2:3906575/93‑1 (MQ=255)

                                        aGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATg                                                >  2:1784871/1‑93 (MQ=255)

                                           aCTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCa                                             <  2:704242/93‑1 (MQ=255)

                                            cTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCAt                                            >  1:427870/1‑93 (MQ=255)

                                             tggtggGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATc                                           >  1:2864699/1‑93 (MQ=255)

                                              ggtggggtgtATATTTGTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCt                                          <  2:2114050/93‑1 (MQ=255)

                                              ggtggggtggATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACGGAGTACCGCTGTGATGTCATCt                                          <  2:1424603/93‑1 (MQ=255)

                                              ggtggggtggATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCt                                          <  1:1173076/93‑1 (MQ=255)

                                              ggtggggtggATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCt                                          <  2:1037879/93‑1 (MQ=255)

                                               gtggggtggATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCtt                                         <  2:5303517/93‑1 (MQ=255)

                                                  gggtggATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCgg                                      >  1:4502559/1‑93 (MQ=255)

                                                   ggtggATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGc                                     >  1:498852/1‑93 (MQ=255)

                                                     tggATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGa                                   >  1:5704356/1‑93 (MQ=255)

                                                      ggATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGAt                                  >  2:1039399/1‑93 (MQ=255)

                                                      ggATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGAt                                  <  2:5335243/93‑1 (MQ=255)

                                                       gATATTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATg                                 <  1:2578684/93‑1 (MQ=255)

                                                        atatTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGt                                <  2:2904219/93‑1 (MQ=255)

                                                         tatTTTTGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTc                               <  2:4727337/93‑1 (MQ=255)

                                                           tttttGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGc                             <  2:2477791/93‑1 (MQ=255)

                                                            ttttGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGcc                            >  2:4035309/1‑93 (MQ=255)

                                                             tttGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGccc                           <  2:340017/93‑1 (MQ=255)

                                                               tGGCGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTCATGTCATCTTCGGCGATCTCGccccg                         >  2:3818765/1‑91 (MQ=255)

                                                                  cGAGACTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTaa                      >  1:6243475/1‑93 (MQ=255)

                                                                   gagaCTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAat                     <  1:1006077/93‑1 (MQ=255)

                                                                    agaCTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAata                    <  2:4420923/93‑1 (MQ=255)

                                                                    agaCTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAata                    <  1:3082217/93‑1 (MQ=255)

                                                                    agaCTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAata                    >  1:5196421/1‑93 (MQ=255)

                                                                     gaCTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAatat                   <  2:3339314/93‑1 (MQ=255)

                                                                     gaCTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAatat                   >  1:3233298/1‑93 (MQ=255)

                                                                      aCTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATAtt                  <  2:4962721/93‑1 (MQ=255)

                                                                       cTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTg                 >  2:5842207/1‑93 (MQ=255)

                                                                       cTTCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTg                 <  2:432999/93‑1 (MQ=255)

                                                                        ttCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGc                >  1:2387209/1‑93 (MQ=255)

                                                                        ttCTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGc                <  2:4534605/93‑1 (MQ=255)

                                                                          cTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCg              >  1:751073/1‑93 (MQ=255)

                                                                          cTACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCg              >  2:1744157/1‑93 (MQ=255)

                                                                           tACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCga             <  2:876800/93‑1 (MQ=255)

                                                                           tACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCga             <  2:5549705/93‑1 (MQ=255)

                                                                           tACTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGACGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCga             <  1:2179292/93‑1 (MQ=255)

                                                                            aCTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCgag            >  1:5847841/1‑93 (MQ=255)

                                                                            aCTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCgag            >  2:2602875/1‑93 (MQ=255)

                                                                            aCTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCgag            >  1:24902/1‑93 (MQ=255)

                                                                             cTGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCgaga           <  1:2646688/93‑1 (MQ=255)

                                                                              tGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGagag          >  2:5106281/1‑93 (MQ=255)

                                                                              tGTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGNCGCCCGGTAATATTGNCGanag          >  1:4902971/1‑93 (MQ=255)

                                                                               gTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGc         >  2:4400576/1‑93 (MQ=255)

                                                                               gTTTCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGc         >  1:1297542/1‑93 (MQ=255)

                                                                                tttCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCg        >  2:4077072/1‑93 (MQ=255)

                                                                                  tCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGaa      >  2:3250028/1‑93 (MQ=255)

                                                                                  tCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGaa      >  1:6309935/1‑93 (MQ=255)

                                                                                  tCAAAGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGaa      <  1:5897543/93‑1 (MQ=255)

                                                                                    aaaGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATc    <  2:5164286/93‑1 (MQ=255)

                                                                                    aaaGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATc    >  1:5954921/1‑93 (MQ=255)

                                                                                    aaaGGCAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATc    <  2:3853448/93‑1 (MQ=255)

CTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATCCG  >  NC_000913/1972596‑1972774

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`