BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,973,993	T→C	E96G (GAA→GGA)	motB ←	MotB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,973,993	0	T	C	98.9%	597.6 / NA	190	E96G (GAA→GGA)	motB	MotB
Reads supporting (aligned to +/- strand): ref base T (1/0); major base C (106/81); minor base A (2/0); total (109/81)
Fisher's exact test for biased strand distribution p-value = 5.08e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 201 total aligned reads displayed.

ATCAACTGGTCGAGATCACCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTTCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATCGCCGCCCGTAACCGCAGTCGCC  >  NC_000913/1973903‑1974082

 tCAACTGGTCGAGATCACCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTcccc                                                                                        >  1:1599289/1‑93 (MQ=255)

 tCAACTGGTCGAGATCACCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTcccc                                                                                        >  2:6177960/1‑93 (MQ=255)

   aaCTGGTCGAGATCACCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTcccccc                                                                                      >  1:3662341/1‑93 (MQ=255)

     cTGGTCGAGATCACCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTg                                                                                    <  1:3480657/93‑1 (MQ=255)

          cGAGATCACCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGCTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCttt                                                                               <  1:3614044/93‑1 (MQ=255)

          cGAGATCACCCCGCAATTTCCACAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCttt                                                                               <  2:2949790/93‑1 (MQ=255)

           gagaTCACCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTg                                                                              <  2:152224/93‑1 (MQ=255)

           gagaTCACCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTg                                                                              <  2:18468/93‑1 (MQ=255)

            agaTCACCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTgg                                                                             >  2:4419353/1‑93 (MQ=255)

            agaTCACCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTgg                                                                             >  1:4463879/1‑93 (MQ=255)

             gaTCCCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTggg                                                                            <  1:4905932/93‑1 (MQ=255)

             gaTCACCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTggg                                                                            >  2:5241354/1‑93 (MQ=255)

             gaTCACCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTggg                                                                            >  1:265878/1‑93 (MQ=255)

             gaTCACCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTCGCTTTggg                                                                            >  2:359153/1‑93 (MQ=255)

               tCACCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGgtg                                                                          >  1:4362412/1‑93 (MQ=255)

                 aCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTa                                                                        >  2:3043946/1‑93 (MQ=255)

                    ccGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAatc                                                                     <  2:5346088/93‑1 (MQ=255)

                    ccGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAatc                                                                     <  2:714964/93‑1 (MQ=255)

                      gCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAatcat                                                                   >  1:2345205/1‑93 (MQ=255)

                        aaTTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAatcatcc                                                                 >  2:1387184/1‑92 (MQ=255)

                         aTTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATcac                                                                <  1:2204453/93‑1 (MQ=255)

                          tttCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATcacc                                                               >  1:4642539/1‑93 (MQ=255)

                          tttCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATcacc                                                               <  1:2001054/93‑1 (MQ=255)

                           ttCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCACCCTGGCTTTGGGTGTAATCATcacca                                                              >  2:431681/1‑93 (MQ=255)

                            tCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATcaccac                                                             >  1:3829633/1‑93 (MQ=255)

                            tCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATcaccac                                                             >  1:2970098/1‑93 (MQ=255)

                               gCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCAccgc                                                          >  2:6127986/1‑93 (MQ=255)

                               gCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCAccgc                                                          <  1:4032379/93‑1 (MQ=255)

                               gCAATCGACTTTGCTCCATGCGGTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCAccgc                                                          >  2:3446654/1‑93 (MQ=255)

                                cAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCAccgcc                                                         <  1:4352420/93‑1 (MQ=255)

                                 aaTCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCCCTCCCCCCTGGCTTTGGGTGTAATCATCACCAccgccg                                                        <  2:1040925/93‑1 (MQ=255)

                                 aaTCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCAccgccg                                                        >  1:1360368/1‑93 (MQ=255)

                                  aTCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCgg                                                       <  1:2067455/93‑1 (MQ=255)

                                   tCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCggg                                                      >  2:5887219/1‑93 (MQ=255)

                                     gACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGaa                                                    <  1:652410/93‑1 (MQ=255)

                                     gACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGaa                                                    <  1:5085128/93‑1 (MQ=255)

                                       cTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAAtt                                                  <  1:3565544/93‑1 (MQ=255)

                                       cTTTGCGCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAAtt                                                  <  1:4970698/93‑1 (MQ=255)

                                        tttGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTg                                                 >  2:2136611/1‑93 (MQ=255)

                                        tttGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTg                                                 <  1:5009353/93‑1 (MQ=255)

                                        tttGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTAGGTGTAATCATCACCACCGCCGGGAATTg                                                 <  1:3672639/93‑1 (MQ=255)

                                         ttGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTgg                                                <  2:2104291/93‑1 (MQ=255)

                                           gCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGc                                              <  1:1010092/93‑1 (MQ=255)

                                             tCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCtt                                            >  2:3026832/1‑93 (MQ=255)

                                              ccATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCttt                                           >  2:3872923/1‑93 (MQ=255)

                                               cATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTc                                          <  2:1534363/93‑1 (MQ=255)

                                               cATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTc                                          <  1:2114829/93‑1 (MQ=255)

                                               cATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTc                                          >  2:5479789/1‑93 (MQ=255)

                                                 tGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCAc                                        >  1:4269485/1‑93 (MQ=255)

                                                 tGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCAc                                        >  2:2569266/1‑93 (MQ=255)

                                                 tGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCAc                                        <  2:2341544/93‑1 (MQ=255)

                                                  gctttttttCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACt                                       <  2:1248611/90‑1 (MQ=255)

                                                    gTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTAt                                     >  2:1766979/1‑93 (MQ=255)

                                                    gTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTAt                                     <  2:5979606/93‑1 (MQ=255)

                                                     ttttttCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGTCTTTCACTAtt                                    <  2:5067635/93‑1 (MQ=255)

                                                     ttttttCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTAtt                                    <  1:84457/93‑1 (MQ=255)

                                                      tttttCATCTCTTCGATGTTCGGCTGCTTATTCCCTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTa                                   <  1:5489512/93‑1 (MQ=255)

                                                      tttttCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTa                                   <  1:5398870/93‑1 (MQ=255)

                                                       ttttCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAg                                  <  2:3323372/93‑1 (MQ=255)

                                                        tttCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGa                                 <  2:6080904/93‑1 (MQ=255)

                                                        tttCAGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGa                                 <  1:1566525/93‑1 (MQ=255)

                                                         ttCAGCTCTTCGATGTTCGGCTGATTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCNCCGCCGGGAATTGGGTTTTCACTNTTAgca                                >  1:1082377/1‑91 (MQ=255)

                                                            aGCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATg                             >  1:4121766/1‑93 (MQ=255)

                                                             gCTCTTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGc                            >  2:5604854/1‑93 (MQ=255)

                                                              ctctTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCg                           >  1:1452997/1‑93 (MQ=255)

                                                               tctTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGa                          >  1:4182512/1‑93 (MQ=255)

                                                               tctTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGa                          <  1:4877860/93‑1 (MQ=255)

                                                               tctTCGATGTTCGGCTGCTTATTCACTCACCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGa                          >  1:5645331/1‑93 (MQ=255)

                                                                ctTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGAt                         >  1:1907004/1‑93 (MQ=255)

                                                                ctTCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGAt                         <  1:3861701/93‑1 (MQ=255)

                                                                 ttCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATc                        >  2:6238682/1‑93 (MQ=255)

                                                                  tCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATcg                       >  2:667041/1‑93 (MQ=255)

                                                                  tCGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATcg                       >  2:3501491/1‑93 (MQ=255)

                                                                   cGATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATcgc                      >  2:3779221/1‑93 (MQ=255)

                                                                    gATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATcgcc                     >  1:571263/1‑93 (MQ=255)

                                                                    gATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATcgcc                     <  2:1611304/93‑1 (MQ=255)

                                                                    gATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATcgcc                     >  1:2736389/1‑93 (MQ=255)

                                                                    gATGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATcgcc                     <  1:2492242/93‑1 (MQ=255)

                                                                     aTGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATcgccg                    >  2:2223192/1‑93 (MQ=255)

                                                                      tGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCCCCAACGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATcgccgc                   >  2:2423816/1‑93 (MQ=255)

                                                                      tGTTCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATcgccgc                   >  2:4558130/1‑93 (MQ=255)

                                                                        ttCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATCGCCGccc                 <  1:5944715/93‑1 (MQ=255)

                                                                         tCGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATCGCCGCCCg                >  1:3147318/1‑93 (MQ=255)

                                                                          cGGCTGCTTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATCGCCGCCCGt               <  2:2044335/93‑1 (MQ=255)

                                                                             ctgctTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATCGCCGCCCGTAAc            <  1:4736522/93‑1 (MQ=255)

                                                                             ctgctTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATCGCCGCCCGTAAc            >  1:440472/1‑93 (MQ=255)

                                                                             ctgctTATTCACTACCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATCGCCGCCCGTAAc            >  2:3142046/1‑93 (MQ=255)

                                                                              tgctTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATCGCCGCCCGTAAcc           >  1:5291524/1‑93 (MQ=255)

                                                                              tgctTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATCGCCGCCCGTAAcc           >  1:2873908/1‑93 (MQ=255)

                                                                              tgctTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATCGCCGCCCGTAAcc           >  1:5898894/1‑93 (MQ=255)

                                                                              tgctTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATCGCCGCCCGTAAcc           >  1:6084755/1‑93 (MQ=255)

                                                                               gctTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATCGCCGCCCGTAACCg          >  2:6288126/1‑93 (MQ=255)

                                                                               gctTATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATCGCCGCCCGTAACCg          >  2:1506953/1‑93 (MQ=255)

                                                                                 ttATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATCGCCGCCCGTAACCGCa        >  1:392152/1‑93 (MQ=255)

                                                                                  tATTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATCGCCGCCCGTAACCGCAg       >  1:577688/1‑93 (MQ=255)

                                                                                   aTTCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATCGCCGCCCGTAACCGCAGt      <  1:6177960/93‑1 (MQ=255)

                                                                                    ttCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATCGCCGCCCGTAACCGCAGTc     >  2:5386958/1‑93 (MQ=255)

                                                                                    ttCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATCGCCGCCCGTAACCGCAGTc     <  2:2637176/93‑1 (MQ=255)

                                                                                    ttCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATCGCCGCCCGTAACCGCAGTc     <  2:1120111/93‑1 (MQ=255)

                                                                                     tCACTCCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATCGCCGCCCGTAACCGCAGTCg    <  1:3407215/93‑1 (MQ=255)

ATCAACTGGTCGAGATCACCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTTCCCCCTGGCTTTGGGTGTAATCATCACCACCGCCGGGAATTGGGCTTTCACTATTAGAAATGCGATCGCCGCCCGTAACCGCAGTCGCC  >  NC_000913/1973903‑1974082

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`