BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,990,664	A→G	S59S (AGT→AGC)	pgsA ←	phosphatidylglycerophosphate synthetase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,990,664	0	A	G	100.0%	695.9 / NA	218	S59S (AGT→AGC)	pgsA	phosphatidylglycerophosphate synthetase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (128/90); total (128/90)

Only 100 of 226 total aligned reads displayed.

CAGCTGTGATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCA  >  NC_000913/1990575‑1990753

caGCTGTGATAATGCTCGGTTACCAGCACCATGGCGATAGCCACTAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGctt                                                                                        <  1:1232411/93‑2 (MQ=255)

caGCTGTGATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGctt                                                                                        >  2:3196101/1‑92 (MQ=255)

caGCTGTGATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGctt                                                                                        >  1:4567183/1‑92 (MQ=255)

 aGCTGTGATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGcttt                                                                                       >  1:5030071/1‑91 (MQ=255)

  gCTGTGATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTg                                                                                      >  1:5331878/1‑93 (MQ=255)

   cTGTGATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCACACCGGGTGCTTTgg                                                                                     >  1:6028868/1‑93 (MQ=255)

    tgtgATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGt                                                                                    >  2:1304036/1‑93 (MQ=255)

      tgATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTc                                                                                  >  2:1002741/1‑93 (MQ=255)

      tgATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTc                                                                                  >  1:3290435/1‑93 (MQ=255)

       gATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTcc                                                                                 <  1:3738142/93‑1 (MQ=255)

        aTAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCa                                                                                <  1:3793050/93‑1 (MQ=255)

         tAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAg                                                                               <  2:5686697/93‑1 (MQ=255)

          aaTGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAgc                                                                              <  1:1100935/93‑1 (MQ=255)

          aaTGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAgc                                                                              >  2:5925700/1‑93 (MQ=255)

          aaTGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAgc                                                                              >  2:3865972/1‑93 (MQ=255)

          aaTGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAgc                                                                              <  1:2029388/93‑1 (MQ=255)

           aTGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAgcg                                                                             >  1:1757562/1‑93 (MQ=255)

           aTGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAgcg                                                                             >  1:1359558/1‑93 (MQ=255)

           aTGATCGGTTACCAGCACCAAGGCGATAGTCACGAGAAGTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAgcg                                                                             >  2:4937174/1‑93 (MQ=255)

            tGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAgcgg                                                                            >  2:4826956/1‑93 (MQ=255)

             gCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGCAAGCACCAAACCGGGTGCTTTGGTTCCAgcggc                                                                           >  1:1040953/1‑93 (MQ=255)

               tCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGt                                                                         >  2:508343/1‑93 (MQ=255)

                  gTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGcc                                                                      >  1:4706496/1‑93 (MQ=255)

                     aCCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGa                                                                   >  1:2669904/1‑93 (MQ=255)

                     aCCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGa                                                                   <  1:4281400/93‑1 (MQ=255)

                      ccAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGaa                                                                  >  2:4707741/1‑93 (MQ=255)

                      ccAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGaa                                                                  <  1:3859146/93‑1 (MQ=255)

                      ccAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGaa                                                                  >  2:649308/1‑93 (MQ=255)

                         gCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAAc                                                               >  2:5519707/1‑93 (MQ=255)

                         gCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAACACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAAc                                                               >  1:1403799/1‑93 (MQ=255)

                          cACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAAcc                                                              <  2:4415529/93‑1 (MQ=255)

                          cACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAAcc                                                              <  1:5260115/93‑1 (MQ=255)

                           aCCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCa                                                             <  1:1625068/93‑1 (MQ=255)

                           aCCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCa                                                             >  2:786209/1‑93 (MQ=255)

                            ccATGGCGATAGCCACGAGAACTTGATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCAt                                                            <  2:4535490/93‑1 (MQ=255)

                             cATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATc                                                           <  2:153084/93‑1 (MQ=255)

                             cATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATc                                                           <  1:5770434/93‑1 (MQ=255)

                              aTGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAATACCATca                                                          >  2:3460750/1‑92 (MQ=255)

                              aTGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCg                                                          >  1:4474548/1‑93 (MQ=255)

                               tGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGa                                                         >  1:3498682/1‑93 (MQ=255)

                                 gCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAAc                                                       <  2:2694581/93‑1 (MQ=255)

                                   gATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACca                                                     >  1:5614301/1‑93 (MQ=255)

                                    aTAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcag                                                    >  2:2150315/1‑93 (MQ=255)

                                     tAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagt                                                   >  1:3255296/1‑93 (MQ=255)

                                      aGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagtc                                                  <  2:4253963/93‑1 (MQ=255)

                                      aGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagtc                                                  >  1:1798290/1‑93 (MQ=255)

                                       gCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagtca                                                 <  1:372171/93‑1 (MQ=255)

                                        ccACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagtcag                                                <  1:703698/93‑1 (MQ=255)

                                         cACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagtcagt                                               >  2:5603065/1‑93 (MQ=255)

                                         cACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagtcagt                                               >  1:5818910/1‑93 (MQ=255)

                                         cACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagtcagt                                               <  2:426131/93‑1 (MQ=255)

                                          ccGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCagtcagtc                                              <  2:1633672/92‑1 (MQ=255)

                                          aCGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCagtcagtc                                              >  1:5961479/1‑93 (MQ=255)

                                          aCGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCagtcagtc                                              <  1:535865/93‑1 (MQ=255)

                                            gagaACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAc                                            <  1:2018569/93‑1 (MQ=255)

                                             agaACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAcc                                           >  1:5541199/1‑93 (MQ=255)

                                             agaACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAcc                                           >  2:1918001/1‑93 (MQ=255)

                                               aaCTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAccgc                                         >  1:2569369/1‑93 (MQ=255)

                                               aaCTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAccgc                                         <  2:3369431/93‑1 (MQ=255)

                                               aaCTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAccgc                                         >  1:3983763/1‑93 (MQ=255)

                                                aCTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAccgcc                                        >  2:3721882/1‑93 (MQ=255)

                                                aCTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAccgcc                                        >  2:6097163/1‑93 (MQ=255)

                                                   ttATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCcgcg                                     >  2:5257788/1‑93 (MQ=255)

                                                    tATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGa                                    >  2:2360387/1‑93 (MQ=255)

                                                        tGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCa                                >  2:2495951/1‑93 (MQ=255)

                                                        tGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCa                                >  1:2555544/1‑93 (MQ=255)

                                                        tGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCa                                <  1:738397/93‑1 (MQ=255)

                                                           cacaGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGaa                             >  1:5167582/1‑93 (MQ=255)

                                                           cacaGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGaa                             >  2:3048745/1‑93 (MQ=255)

                                                           cacaGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGaa                             >  1:2336058/1‑93 (MQ=255)

                                                           cacaGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGaa                             <  1:1965564/93‑1 (MQ=255)

                                                            acaGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGaaa                            >  1:4966187/1‑93 (MQ=255)

                                                            acaGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGaaa                            >  2:5841148/1‑93 (MQ=255)

                                                            acaGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGaaa                            <  2:3679409/93‑1 (MQ=255)

                                                              aGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAAt                          <  2:1720926/93‑1 (MQ=255)

                                                               gggTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATg                         >  2:3903976/1‑93 (MQ=255)

                                                               gggTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATg                         <  1:4133674/93‑1 (MQ=255)

                                                               gggTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATg                         <  2:1079502/93‑1 (MQ=255)

                                                                ggTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGa                        <  2:5396596/93‑1 (MQ=255)

                                                                    aaGGAAAGCACCAATCCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGTACCAGTCAGTGACCGCCGAGACGCAGAAAATCAgcgc                    >  2:2995784/1‑93 (MQ=255)

                                                                    aaGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAgcgc                    >  1:20801/1‑93 (MQ=255)

                                                                       gAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCgcggc                 <  2:5148401/93‑1 (MQ=255)

                                                                        aaaGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCgcggcg                <  2:2224706/93‑1 (MQ=255)

                                                                         aaGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCATCGCCGCGACGCAGAAAATGAGCGcggcgg               >  2:5948373/1‑93 (MQ=255)

                                                                         aaGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGcggcgg               >  2:4620264/1‑93 (MQ=255)

                                                                         aaGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGcggcgg               >  1:4941936/1‑93 (MQ=255)

                                                                            cACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCaa            >  1:4222/1‑93 (MQ=255)

                                                                             aCCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCaaa           <  1:3030002/93‑1 (MQ=255)

                                                                               cAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACg         <  1:5496596/93‑1 (MQ=255)

                                                                               cAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACg         <  2:1371001/93‑1 (MQ=255)

                                                                               cAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACg         <  2:3596333/93‑1 (MQ=255)

                                                                                 acccGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGc       <  2:1975576/91‑1 (MQ=255)

                                                                                 aaCCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGc       <  1:5411504/93‑1 (MQ=255)

                                                                                 aaCCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGc       <  1:4607519/93‑1 (MQ=255)

                                                                                 aaCCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGc       <  2:5875833/93‑1 (MQ=255)

                                                                                 aaCCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGc       <  2:1557640/93‑1 (MQ=255)

                                                                                   ccGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCCACGCAGAAAATGAGCGCGGCGGCAAACGGCGa     <  2:2888409/93‑1 (MQ=255)

                                                                                    cGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGAc    >  2:5783622/1‑93 (MQ=255)

                                                                                    cGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGAc    >  2:2768361/1‑93 (MQ=255)

                                                                                      ggTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCa  >  1:6206097/1‑93 (MQ=255)

CAGCTGTGATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCA  >  NC_000913/1990575‑1990753

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`